operon's library 2225 articles Export

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	A phylogenomic approach to resolve the basal pterygote divergence. [My Copy] Molecular biology and evolution, Vol. 26, No. 12. (December 2009), pp. 2719-2730. by Sabrina Simon, Sascha Strauss, Arndt von Haeseler, Heike Hadrys posted to transposon phylogenetics phylogenetic_analyses genomics evolution by operon on 2009-11-17 00:27:09 as
	Improved repeat identification and masking in Dipterans. [My Copy] Gene, Vol. 389, No. 1. (1 March 2007), pp. 1-9. by Christopher D. Smith, Robert C. Edgar, Mark D. Yandell, et al.Douglas R. Smith, Susan E. Celniker, Eugene W. Myers, Gary H. Karpen posted to transposon insect evolution arthropod annotation by operon on 2009-09-30 04:59:29 as along with 4 people and 1 group timflutre natstreet druvus PetrovLab LabDros
	Molecular phylogenetics: testing evolutionary hypotheses. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 502 (2009), pp. 131-168. by D. A. Walsh, A. K. Sharma posted to algorithm evolution phylogenetics by operon on 2009-01-08 11:59:03 as along with 2 people and 1 group gwallau druvus LabDros
	The path to productive partnerships [My Copy] Nature, Vol. 452, No. 7188. (10 April 2008), pp. 665-665. posted to social by operon on 2008-04-17 03:11:29 as along with 5 people biologyeditors dullhunk hpiwowar yuhc applebyb
	Multilocus sequence typing (MLST) of Mycoplasma hyopneumoniae: a diverse pathogen with limited clonality. [My Copy] Veterinary microbiology, Vol. 127, No. 1-2. (5 February 2008), pp. 63-72. by D. Mayor, J. Jores, B. M. Korczak, P. Kuhnert posted to master mycoplasma reduction by operon on 2008-04-13 22:38:25 as
	Darwinian Evolution on a Chip [My Copy] PLoS Biology, Vol. 6, No. 4. (1 April 2008), e85. by Brian M. Paegel, Gerald F. Joyce posted to evolution rna by operon on 2008-04-11 03:28:25 as along with 10 people and 2 groups stevanspringer xingxu Minty renatomilani TomQ phoenixzxl melting dlobo cfleet barry GEB Bioinformatics
	The small genome of an abundant coastal ocean methylotroph. [My Copy] Environmental microbiology (3 April 2008) by Stephen J J. Giovannoni, Darin H H. Hayakawa, H James J. Tripp, et al.Ulrich Stingl, Scott A A. Givan, Jang-Cheon C. Cho, Hyun-Myung M. Oh, Joshua B B. Kitner, Kevin L L. Vergin, Michael S S. Rappé posted to genomics reduction by operon on 2008-04-10 03:17:31 as along with 2 people and 2 groups vrich vaulot Microbial-Ecology Papers recommended by the Roscoff Plankton Group
	The origin of mitochondria in light of a fluid prokaryotic chromosome model. [My Copy] Biology letters, Vol. 3, No. 2. (22 April 2007), pp. 180-184. by C. Esser, W. Martin, T. Dagan posted to master reduction by operon on 2008-04-03 18:32:07 as
	When less is more: gene loss as an engine of evolutionary change. [My Copy] Am J Hum Genet, Vol. 64, No. 1. (January 1999), pp. 18-23. by M. V. Olson posted to master reduction by operon on 2008-04-03 04:37:42 as along with 5 people and 1 group memerman Annab stevanspringer djkt bpcusack FAB-lab
	Comparative genomics of microbial pathogens and symbionts. [My Copy] Bioinformatics (Oxford, England), Vol. 18 Suppl 2 (2002) by S. G. Andersson, C. Alsmark, B. Canbäck, et al.W. Davids, C. Frank, O. Karlberg, L. Klasson, B. Antoine-Legault, A. Mira, I. Tamas posted to evolution master pathogenics reduction by operon on 2008-04-03 02:32:53 as along with 1 person MarkMelioid
	Proteomic survey of the pathogenic Mycoplasma hyopneumoniae strain 7448 and identification of novel post-translationally modified and antigenic proteins. [My Copy] Veterinary microbiology, Vol. 121, No. 1-2. (31 March 2007), pp. 83-93. by P. M. Pinto, G. Chemale, L. A. de Castro, et al.A. P. Costa, J. D. Kich, M. H. Vainstein, A. Zaha, H. B. Ferreira posted to expression master mycoplasma by operon on 2008-04-03 01:47:10 as along with 1 person shana
	Analysis of Promoter Targets for Escherichia coli Transcription Elongation Factor GreA In Vivo and In Vitro [My Copy] J. Bacteriol., Vol. 189, No. 24. (15 December 2007), pp. 8772-8785. by Ekaterina Stepanova, Jookyung Lee, Maria Ozerova, et al.Ekaterina Semenova, Kirill Datsenko, Barry L. Wanner, Konstantin Severinov, Sergei Borukhov posted to evolution genomics master mcite mycoplasma by operon on 2008-04-02 16:48:51 as along with 1 person margaritis
	Pathogens in decay [My Copy] Nat Rev Micro, Vol. 2, No. 10. (October 2004), pp. 774-775. by Ana Cerdeno-Tarraga, Nicholas Thomson, Julian Parkhill posted to master reduction by operon on 2008-04-01 02:21:28 as along with 1 person treangen
	Stochastic switching as a survival strategy in fluctuating environments [My Copy] Nat Genet, Vol. 40, No. 4. (April 2008), pp. 471-475. by Murat Acar, Jerome T. Mettetal, Alexander van Oudenaarden posted to evolution master by operon on 2008-03-31 23:18:10 as along with 13 people and 1 group balabu lbnc stefanjanusz A_Olympia jjray gokhan dbikard margaritis bootsy qwermish fjvico osilander brianb GEB
	Protein stability imposes limits on organism complexity and speed of molecular evolution [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 41. (9 October 2007), pp. 16152-16157. by Konstantin B. Zeldovich, Peiqiu Chen, Eugene I. Shakhnovich posted to master reduction by operon on 2008-03-30 15:11:44 as along with 5 people bpcusack penka cjeans cactus cdeane
	Acceleration of genomic evolution caused by enhanced mutation rate in endocellular symbionts [My Copy] Proceedings of the National Academy of Sciences, Vol. 99, No. 20. (1 October 2002), pp. 12944-12948. by Takeshi Itoh, William Martin, Masatoshi Nei posted to master reduction by operon on 2008-03-30 15:11:17 as
	Stability of mRNA/DNA and DNA/DNA duplexes affects mRNA transcription. [My Copy] PLoS ONE, Vol. 2, No. 3. (2007) by R. I. Kraeva, D. B. Krastev, A. Roguev, A. Ivanova, M. N. Nedelcheva-Veleva, S. S. Stoynov posted to biophysics master by operon on 2008-03-29 21:52:54 as
	Synonymous Codon Bias Is Not Caused by Mutation Bias in G+C-Rich Genes in Humans [My Copy] Mol Biol Evol, Vol. 18, No. 6. (1 June 2001), pp. 982-986. by Nick G. Smith, Adam Eyre-Walker posted to evolution master by operon on 2008-03-29 21:25:58 as
	Intraspecific variation in symbiont genomes: bottlenecks and the aphid-buchnera association. [My Copy] Genetics, Vol. 157, No. 2. (February 2001), pp. 477-489. by D. J. Funk, J. J. Wernegreen, N. A. Moran posted to evolution genometrics master by operon on 2008-03-28 18:41:15 as along with 1 person manzanita
	Mutational Interference and the Progression of Muller's Ratchet When Mutations Have a Broad Range of Deleterious Effects [My Copy] Genetics, Vol. 177, No. 2. (1 October 2007), pp. 971-986. by R. Jonas Soderberg, Otto G. Berg posted to selection phylogenetics mutation evolution by operon on 2008-03-28 14:33:25 as
	The Roles of Mutation Accumulation and Selection in Loss of Sporulation in Experimental Populations of Bacillus subtilis [My Copy] Genetics, Vol. 177, No. 2. (1 October 2007), pp. 937-948. by Heather Maughan, Joanna Masel, William C. Birky, Wayne L. Nicholson posted to evolution master by operon on 2008-03-28 14:33:07 as
	Should we expect substitution rate to depend on population size? [My Copy] Genetics, Vol. 150, No. 2. (October 1998), pp. 911-919. by J. L. Cherry posted to evolution master by operon on 2008-03-28 14:13:04 as along with 1 person mdimmic
	RATES OF MOLECULAR EVOLUTION: Phylogenetic Issues and Applications [My Copy] Annual Review of Ecology and Systematics, Vol. 27, No. 1. (1996), pp. 279-303. by David P. Mindell, Christine E. Thacker posted to evolution master review by operon on 2008-03-28 13:42:29 as
	Accelerated evolution and Muller's rachet in endosymbiotic bacteria [My Copy] PNAS, Vol. 93, No. 7. (2 April 1996), pp. 2873-2878. by Nancy A. Moran posted to master reduction by operon on 2008-03-28 03:41:42 as along with 1 person and 2 groups mattjb ComplexAdaptiveSystems DSTO-CAS
	Phylogenomic analysis of natural selection pressure in Streptococcus genomes. [My Copy] BMC evolutionary biology, Vol. 7 (30 August 2007), 154. by Maria Anisimova, Joseph Bielawski, Katherine Dunn, Ziheng Yang posted to evolution master selection by operon on 2008-03-18 20:05:59 as along with 1 person gjuggler
	Microbial minimalism: genome reduction in bacterial pathogens. [My Copy] Cell, Vol. 108, No. 5. (8 March 2002), pp. 583-586. by N. A. Moran posted to evolution master reduction by operon on 2008-03-16 21:04:03 as
	The roles of positive and negative selection in the molecular evolution of insect endosymbionts. [My Copy] Gene, Vol. 355 (1 August 2005), pp. 1-10. by A. J. Fry, J. J. Wernegreen posted to evolution master by operon on 2008-03-16 21:03:03 as along with 1 person katholt
	Purifying selection in mitochondria, free-living and obligate intracellular proteobacteria [My Copy] BMC Evolutionary Biology, Vol. 7 (12 February 2007), 17. by Leila Mamirova, Konstantin Popadin, Mikhail S. Gelfand posted to master by operon on 2008-03-16 20:54:57 as
	Genome evolution in cyanobacteria: The stable core and the variable shell [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 7. (19 February 2008), pp. 2510-2515. by Tuo Shi, Paul G. Falkowski posted to evolution master by operon on 2008-03-16 20:36:30 as along with 6 people and 2 groups Scis0000002 mhiromi Thaverkamp bluto vaulot tuoshi Microbial-Ecology Papers recommended by the Roscoff Plankton Group
	Breathing Dynamics in Heteropolymer DNA [My Copy] Biophys. J., Vol. 92, No. 8. (15 April 2007), pp. 2674-2684. by Tobias Ambjornsson, Suman K. Banik, Oleg Krichevsky, Ralf Metzler posted to biophysics master by operon on 2008-03-16 17:52:00 as
	Evolution of mollicutes: down a bumpy road with twists and turns. [My Copy] Res Microbiol, Vol. 158, No. 10. (December 2007), pp. 754-766. by P. Sirand-Pugnet, C. Citti, A. Barré, A. Blanchard posted to evolution master mycoplasma reduction by operon on 2008-03-16 15:47:43 as
	The K(A)/K(S) ratio test for assessing the protein-coding potential of genomic regions: an empirical and simulation study. [My Copy] Genome Res, Vol. 12, No. 1. (January 2002), pp. 198-202. by A. Nekrutenko, K. D. Makova, W. H. Li posted to evolution master selection by operon on 2008-03-16 14:43:38 as along with 1 person Cortel
	Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elements. [My Copy] PLoS Biol, Vol. 2, No. 3. (March 2004) by M. Wu, L. V. Sun, J. Vamathevan, et al.M. Riegler, R. Deboy, J. C. Brownlie, E. A. McGraw, W. Martin, C. Esser, N. Ahmadinejad, C. Wiegand, R. Madupu, M. J. Beanan, L. M. Brinkac, S. C. Daugherty, A. S. Durkin, J. F. Kolonay, W. C. Nelson, Y. Mohamoud, P. Lee, K. Berry, M. B. Young, T. Utterback, J. Weidman, W. C. Nierman, I. T. Paulsen, K. E. Nelson, H. Tettelin, S. L. O'Neill, J. A. Eisen posted to master reduction by operon on 2008-03-10 02:28:34 as along with 3 people and 1 group knaseanka radek wrowell Cline_lab
	Ancestral genome sizes specify the minimum rate of lateral gene transfer during prokaryote evolution [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 3. (16 January 2007), pp. 870-875. by Tal Dagan, William Martin posted to master reduction by operon on 2008-03-10 00:39:43 as along with 2 people treangen AaronDarling
	Are all horizontal gene transfers created equal? Prospects for mechanism-based studies of HGT patterns [My Copy] Microbiology, Vol. 154, No. 1. (1 January 2008), pp. 1-15. by Jesse R. Zaneveld, Diana R. Nemergut, Rob Knight posted to evolution horizontal_transfer master by operon on 2008-03-09 23:39:17 as along with 1 person rec3141
	Biological applications of the theory of birth-and-death processes [My Copy] Brief Bioinform, Vol. 7, No. 1. (1 March 2006), pp. 70-85. by Artem S. Novozhilov, Georgy P. Karev, Eugene V. Koonin posted to evolution master by operon on 2008-03-09 23:36:31 as along with 2 people marcusfrean lp2
	Extensive Proliferation of Transposable Elements in Heritable Bacterial Symbionts [My Copy] J. Bacteriol., Vol. 190, No. 2. (15 January 2008), pp. 777-779. by Gordon R. Plague, Helen E. Dunbar, Phat L. Tran, Nancy A. Moran posted to evolution master by operon on 2008-03-09 23:30:34 as along with 1 person nikkiwithers
	Loss of DNA Recombinational Repair Enzymes in the Initial Stages of Genome Degeneration [My Copy] Mol Biol Evol, Vol. 20, No. 8. (1 August 2003), pp. 1188-1194. by Colin Dale, Ben Wang, Nancy Moran, Howard Ochman posted to master reduction by operon on 2008-03-09 23:17:01 as along with 1 person wasmith75
	The other side of the nearly neutral theory, evidence of slightly advantageous back-mutations [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 43. (23 October 2007), pp. 16992-16997. by Jane Charlesworth, Adam Eyre-Walker posted to selection phylogenetics mutation evolution by operon on 2008-02-21 13:57:57 as along with 3 people ilyashl emptyhb bpcusack
	Genome history in the symbiotic hybrid Euglena gracilis. [My Copy] Gene, Vol. 402, No. 1-2. (1 November 2007), pp. 35-39. by N. Ahmadinejad, T. Dagan, W. Martin posted to genomics evolution master symbiosis by operon on 2008-02-04 13:55:17 as
	DNA Double Helices Recognize Mutual Sequence Homology in a Protein Free Environment [My Copy] J. Phys. Chem. B, Vol. 112, No. 4. (31 January 2008), pp. 1060-1064. by G. S. Baldwin, N. J. Brooks, R. E. Robson, et al.A. Wynveen, A. Goldar, S. Leikin, J. M. Seddon, A. A. Kornyshev posted to biophysics dna gene master rearrangements recombination by operon on 2008-02-02 19:06:38 as
	Some bacteria degrade explosives, others prefer boiling methanol [My Copy] Environmental Microbiology, Vol. 9, No. 12. (December 2007), pp. 2905-2910. by Galperin, Y. Michael posted to biodiversity biofuels biotechnology prokaryote by operon on 2008-01-27 16:40:38 as
	Transcriptome Changes in Mycoplasma hyopneumoniae During Infection. [My Copy] Infect Immun (10 December 2007) by Melissa L L. Madsen, Supraja Puttamreddy, Eileen L L. Thacker, Michael D D. Carruthers, F Chris C. Minion posted to prokaryote genomics infection interaction microarray mycoplasma transcription transcriptome by operon on 2007-12-16 21:27:17 as along with 1 person shana
	Modeling DNA-binding of Escherichia coli sigma70 exhibits a characteristic energy landscape around strong promoters [My Copy] Nucl. Acids Res. (16 October 2007), gkm720. by Johanna Weindl, Pavol Hanus, Zaher Dawy, Juergen Zech, Joachim Hagenauer, Jakob C. Mueller posted to promoter structure bioinformatics genomics prokaryote protein by operon on 2007-10-21 17:46:07 as along with 3 people and 1 group jjray dpollard maximilianh EisenLab
	Diversity-generating retroelements. [My Copy] Curr Opin Microbiol (17 August 2007) by Bob Medhekar, Jeff F F. Miller posted to genomics evolution gene genetics phylogenetics transposon by operon on 2007-08-29 06:18:38 as
	Adaptive Mutations in Bacteria: High Rate and Small Effects [My Copy] Science, Vol. 317, No. 5839. (10 August 2007), pp. 813-815. by Lilia Perfeito, Lisete Fernandes, Catarina Mota, Isabel Gordo posted to prokaryote adaptation bioinformatics evolution genomics mutation phylogenetics by operon on 2007-08-20 02:57:59 as along with 3 people and 1 group alexeid stevanspringer zwang FAB-lab
	Phylogenetic Relationships Among Mycoplasmas Based on the Whole Genomic Information [My Copy] Journal of Molecular Evolution by Kenro Oshima, Hiromi Nishida posted to bioinformatics evolution firmicute genomics master mycoplasma phylogenetics by operon on 2007-08-14 13:43:32 as
	DarkHorse: a method for genome-wide prediction of horizontal gene transfer. [My Copy] Genome biology, Vol. 8, No. 2. (02 February 2007), R16. by Sheila Podell, Terry Gaasterland posted to genomics prokaryote bioinformatics evolution horizontal_transfer phylogenetics by operon on 2007-07-26 16:59:58 as along with 2 people eweaver karfunkel
	Phylogenetic Reconstruction of Orthology, Paralogy, and Conserved Synteny for Dog and Human [My Copy] PLoS Comput Biol, Vol. 2, No. 9. (29 September 2006), e133. by Leo Goodstadt, Chris P. Ponting posted to eukaryotic evolution genomics ortholog paralog phylogenetics synteny by operon on 2007-07-23 21:11:47 as along with 3 people and 2 groups aprasad avilella indigoviolet Ensembl Compara citations EisenLab
	Assessing performance of orthology detection strategies applied to eukaryotic genomes. [My Copy] PLoS ONE, Vol. 2 (2007) by F. Chen, A. J. Mackey, J. K. Vermunt, D. S. Roos posted to eukaryotic evolution optimization ortholog phylogenetics by operon on 2007-07-23 20:37:13 as along with 14 people and 3 groups richardbickerton treangen dquest cgaugain druvus icases rvosa indigoviolet stajich cjeans winterschlaefer bpcusack cerca natstreet EisenLab FAB-lab TNT

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evolution	913
master	794
transposon	515
phylogenetics	421
genomics	392
selection	239
bioinformatics	224
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mutation	209
software	180
mycoplasma	98
doctorate	87
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cell	13
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tools	1
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vertebrate	1
web_service	1

operon's library 2225 articles Export

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