operon's assembly [17 articles] Export

Recent papers added to operon's library classified by the tag assembly. You can also see everyone's assembly.

	The GNUMAP Algorithm: Unbiased Probabilistic Mapping of Oligonucleotides from Next-Generation Sequencing [My Copy] Bioinformatics (27 October 2009), btp614. by Nathan L. Clement, Quinn Snell, Mark J. Clement, et al.Peter C. Hollenhorst, Jahnvi Purwar, Barbara J. Graves, Bradley R. Cairns, W. Evan Johnson posted to software sequencing genomics bioinformatics assembly by operon on 2009-10-31 00:48:49 as along with 4 people darian heliopais n00c druvus
	Assisted assembly: how to improve a de novo genome assembly by using related species [My Copy] Genome Biology, Vol. 10, No. 8. (2009), R88. by Sante Gnerre, Eric Lander, Kerstin L. Toh, David Jaffe posted to method bioinformatics assembly by operon on 2009-09-30 00:56:51 as along with 20 people and 2 groups n00c davidmam klo fstrozzi kiekyon torfinnnome dakelley jamselem err129 djkt darian APRegier thegoose danmaclean stajich natstreet neils druvus GustavoLacerda avilella Mycology Journal picks
	PerM: efficient mapping of short sequencing reads with periodic full sensitive spaced seeds [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2514-2521. by Yangho Chen, Tade Souaiaia, Ting Chen posted to software method bioinformatics assembly by operon on 2009-09-27 16:52:09 as along with 10 people and 1 group Julien_Fayolle heliopais darian dswan fishtank polivares n00c torfinnnome druvus natstreet BergmanLab
	Gene-Boosted Assembly of a Novel Bacterial Genome from Very Short Reads [My Copy] PLoS Comput Biol In PLoS Comput Biol, Vol. 4, No. 9. (26 September 2008), e1000186. by Steven L. Salzberg, Daniel D. Sommer, Daniela Puiu, Vincent T. Lee posted to genomics assembly by operon on 2009-09-27 15:45:53 as along with 17 people and 5 groups skembel n00c michaelbarton azazello Thaverkamp dakelley sconlan GustavoLacerda treangen natstreet antonkratz druvus vaulot djkt Katje stajich semrich BergmanLab Papers recommended by the Roscoff Plankton Group iSEEM microbiology_nijmegen Mycology
	LookSeq: A browser-based viewer for deep sequencing data [My Copy] Genome Research, Vol. 19, No. 11. (29 November 2009), pp. 2125-2132. by Heinrich M. Manske, Dominic P. Kwiatkowski posted to visualization software genomics bioinformatics assembly by operon on 2009-08-16 00:59:23 as along with 28 people and 2 groups humburg hzoltan darian dakelley tonamswish inesdesantiago Thaverkamp idonaldson heliopais owhitney GustavoLacerda ngehlenborg sandfire fpattyn xianjun katholt stubrown orzenil guhjy kongl stajich n00c torfinnnome nuin kshameer neils druvus natstreet BergmanLab Mycology
	Maximum likelihood genome assembly. [My Copy] Journal of computational biology : a journal of computational molecular cell biology, Vol. 16, No. 8. (August 2009), pp. 1101-1116. by Paul Medvedev, Michael Brudno posted to algorithm assembly bioinformatics genomics software by operon on 2009-08-02 01:52:40 as along with 7 people dakelley nuin walshtp djkt n00c natstreet druvus
	SOAP2: an improved ultrafast tool for short read alignment [My Copy] Bioinformatics, Vol. 25, No. 15. (1 August 2009), pp. 1966-1967. by Ruiqiang Li, Chang Yu, Yingrui Li, et al.Tak-Wah Lam, Siu-Ming Yiu, Karsten Kristiansen, Jun Wang posted to algorithm alignment assembly bioinformatics genomics software by operon on 2009-07-28 15:08:23 as along with 28 people and 6 groups darian nuin hzoltan agbiotec torfinnnome natstreet cthachuk jforment GustavoLacerda adijr bozdagd stubrown polivares guhjy ollieredfernwork cassj adamjamesreid Stew jamselem dswan idonaldson TRHvidsten humburg djkt farhat n00c jmeppley druvus Bioinformatics Core Service BergmanLab Orengo Group Journal Picks Bioinformatics - CRUK Bioinformatics Journal picks
	SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing. [My Copy] Genome research, Vol. 17, No. 11. (November 2007), pp. 1697-1706. by J. C. Dohm, C. Lottaz, T. Borodina, H. Himmelbauer posted to assembly bioinformatics genomics method software by operon on 2009-06-30 23:56:45 as along with 16 people and 2 groups n00c robsyme dakelley acn druvus nmohelli natstreet timflutre stajich ghattem azazello GustavoLacerda niallhaslam flexer jwhitney iris42 DeNovoAssembly-SIMR Mycology
	The Sequence Alignment/Map format and SAMtools. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 16. (15 August 2009), pp. 2078-2079. by Heng Li, Bob Handsaker, Alec Wysoker, et al.Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin, 1000 Genome Project Data Processing Subgroup posted to assembly bioinformatics genomics method software by operon on 2009-06-30 23:56:41 as along with 29 people and 2 groups MarkFiers n00c darian cthachuk hzoltan seb1 heliopais urgi idonaldson GustavoLacerda stubrown cassj kshameer ciax polivares carlosjavierna jandot katholt jmcq guhjy orzenil jasontsai farhat AlexBateman chrisamiller nuin natstreet sandfire druvus BergmanLab Journal picks
	Efficient frequency-based de novo short-read clustering for error trimming in next-generation sequencing. [My Copy] Genome research, Vol. 19, No. 7. (4 July 2009), pp. 1309-1315. by Wei Qu, Shin-Ichi Hashimoto, Shinichi Morishita posted to assembly bioinformatics genomics method software by operon on 2009-06-30 23:56:35 as along with 9 people mpizbioinfo heliopais druvus n00c megraw nlapalu dakelley djkt natstreet
	Velvet: algorithms for de novo short read assembly using de Bruijn graphs. [My Copy] Genome research In Genome Research, Vol. 18, No. 5. (18 May 2008), pp. 821-829. by Daniel R. Zerbino, Ewan Birney posted to assembly bioinformatics genomics method software by operon on 2009-06-30 23:56:26 as along with 45 people and 3 groups claire_jubin danbolser humburg ajsferreira vplagnol bedo jwhitney cthachuk hzoltan azazello ajbattle jmanning2k n00c carlk pachorip APRegier jbhiatt jonilaserson jahwa jsatkosk sandfire thegoose2 katholt robsyme djkt hpaces AaronDarling mhz idoerg jmcq dswan dakelley jasontsai acn druvus natstreet nmohelli stajich farhat iris42 tharris Neeperando sharpton GustavoLacerda gdb Bioinformatics DeNovoAssembly-SIMR Mycology
	De novo bacterial genome sequencing: Millions of very short reads assembled on a desktop computer [My Copy] Genome Research, Vol. 18, No. 5. (10 May 2008), pp. 802-809. by David Hernandez, Patrice FranÃ§ois, Laurent Farinelli, Magne Ãsterã¥s, Jacques Schrenzel posted to assembly bioinformatics sequencing software by operon on 2009-06-30 23:55:39 as along with 15 people and 4 groups n00c GeeSharpMinor pachorip druvus dakelley acn nmohelli GustavoLacerda jmeppley stajich azazello Katje iris42 balicea Neeperando DeNovoAssembly-SIMR microbiology_nijmegen Mycology gatech-compgenomics
	ABySS: a parallel assembler for short read sequence data. [My Copy] Genome research, Vol. 19, No. 6. (1 June 2009), pp. 1117-1123. by Jared T. Simpson, Kim Wong, Shaun D. Jackman, Jacqueline E. Schein, Steven J. Jones, Inanç Birol posted to assembly bioinformatics genomics sequencing software by operon on 2009-06-30 23:55:22 as along with 27 people and 2 groups darian jfr cthachuk hzoltan ramonvidal orzenil pachorip GustavoLacerda jonilaserson polivares reyez jasontsai n00c humburg dakelley jessopher idonaldson robsyme neils natstreet AaronDarling druvus rpatward dswan stajich jbhiatt erikarner BergmanLab Mycology
	ALLPATHS: De novo assembly of whole-genome shotgun microreads [My Copy] Genome Research, Vol. 18, No. 5. (13 May 2008), pp. 810-820. by Jonathan Butler, Iain MacCallum, Michael Kleber, et al.Ilya A. Shlyakhter, Matthew K. Belmonte, Eric S. Lander, Chad Nusbaum, David B. Jaffe posted to assembly bioinformatics genomics method software by operon on 2009-06-30 23:55:03 as along with 23 people and 1 group ajsferreira n00c carlk jmanning2k APRegier pachorip jonilaserson thegoose2 natstreet AaronDarling mhz dakelley druvus stajich azazello hpaces tharris jwhitney iris42 Neeperando sharpton GustavoLacerda GeeSharpMinor Mycology
	Fast and accurate short read alignment with Burrows-Wheeler transform. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 14. (15 July 2009), pp. 1754-1760. by Heng Li, Richard Durbin posted to assembly bioinformatics genomics software by operon on 2009-06-29 21:16:51 as along with 35 people and 4 groups urgi agbiotec lianping hzoltan cthachuk maren bozdagd adijr heliopais jmanning2k GustavoLacerda stubrown jessopher guhjy katholt mkiyer jmcq idonaldson michaelbarton polivares darian orzenil cassj inesdesantiago TRHvidsten djkt ghattem n00c danmaclean ppgardne nuin rschulz natstreet druvus humburg BergmanLab SIMR bioinformatics Bioinformatics Journal picks
	CloudBurst: highly sensitive read mapping with MapReduce [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1363-1369. by Michael C. Schatz posted to assembly bioinformatics sequencing software by operon on 2009-05-20 15:36:02 as along with 33 people and 2 groups joshdsullivan cthachuk hzoltan jfr walshtp idonaldson orzenil heliopais dakelley bozdagd agbiotec jandot guhjy n00c cymacs semrich nuin AlexBateman fgibson rschulz dswan mitko djkt humburg jmeppley coela vagoskar svenrahmann natstreet brianb Neeperando druvus neils KCL & UCL Bioinformatics Bioinformatics
	MapView: visualization of short reads alignment on a desktop computer [My Copy] Bioinformatics, Vol. 25, No. 12. (15 June 2009), pp. 1554-1555. by Hua Bao, Hui Guo, Jinwei Wang, Renchao Zhou, Xuemei Lu, Suhua Shi posted to assembly bioinformatics sequencing software by operon on 2009-05-20 14:48:10 as along with 9 people and 1 group seb1 guhjy jmeppley dakelley n00c idonaldson dswan natstreet druvus Bioinformatics

Note: You may cite this page as: http://www.citeulike.org/user/operon/tag/assembly

evolution	933
master	794
transposon	528
phylogenetics	424
genomics	399
selection	239
bioinformatics	234
reduction	220
mutation	210
software	192
mycoplasma	103
doctorate	87
annotation	74
prokaryote	73
drosophila	65
retroelement	62
arthropod	60
protein	58
structure	56
algorithm	43
method	41
genometrics	40
horizontal_transfer	39
ortholog	35
dna	35
pathogenics	31
statistics	31
bacteria	31
database	31
immunology	31
repeats	30
symbiosis	30
genetics	29
codon_bias	29
rearrangements	28
sequencing	27
analysis	25
biotechnology	23
expression	23
clustering	22
molecular	20
transcription	20
gene	19
social	19
comparative	19
classification	19
systems_biology	17
bayes	17
similarity	17
assembly	17
insect	16
population	16
data_mining	15
biophysics	15
molecular_clock	14
microarray	14
modelling	14
ontology	14
alignment	14
ai	13
science	13
simulation	13
biodiversity	13
cell	13
search	12
chromosome	12
proteomics	12
computational	12
hardware	12
rna	11
human	11
functional	11
eukaryotic	11
network	10
homology	10
regulation	10
transcriptome	10
literature	10
visualization	9
metagenomics	9
dynamics	9
recombination	9
cancer	8
plant	7
duplication	7
molecule	7
enzymes	7
development	7
multivariate	7
docking	6
microbiology	6
adaptation	6
patterns	6
biofuels	6
3d	6
motif	6
membrane	6
programming	6
genome	5
repeat	5
sex	5
repair	5
microscopy	5
snp	5
synthesis	5
pseudogene	5
data	5
review	5
web	4
pharmacogenomics	4
hmm	4
drug_discovery	4
python	4
coalescence	4
interaction	4
virus	4
pathway	4
chemistry	4
strand	4
transposons	4
quantitative	4
methylation	4
model	4
fluorescence	4
population_genetics	4
cladistics	3
mite	3
alu	3
infection	3
tandem	3
diagnostics	3
promoter	3
neutralism	3
physics	3
methods	3
mcite	3
go	3
nanotechnology	3
quantum	3
graph	3
phylogenetic_analyses	3
prediction	3
biochemistry	3
firmicute	3
intron	3
qsar	3
motif_discovery	3
selectionism	3
text_mining	3
fret	3
biology	3
r	3
biotech	3
vaccine	3
paralog	3
health	3
proteome	3
est	2
motifs	2
thesis	2
screening	2
pcr	2
splicing	2
sequence	2
design	2
experimental	2
philosophy	2
genomic	2
mathematics	2
synteny	2
circadian	2
xml	2
cool	2
semantics	2
454	2
translation	2
folding	2
replication	2
genes	2
pharma	2
parallel	2
phylogeny	2
size	2
helitron	2
p6	2
metabolic	2
noncoding	2
svm	2
optimization	2
polymorphism	2
exon	2
2d	2
phylogenetic	2
haplotype	2
energy	2
fuelcell	2
scientists	2
gpgpu	2
divergence_times	2
research	2
projx	2
epigenomics	2
sine	2
theory	2
laser	1
high-throughput	1
database_search	1
hydrogen	1
vertebrate	1
array	1
lipoprotein	1
collaboration	1
constraints	1
spot	1
tree_topology	1
framework	1
thermodynamics	1
genotyping	1
imprinting	1
molecular_evolution	1
variability	1
web_service	1
noncoding_regions	1
protein_function	1
evolutionary_rates	1
large-scale	1
pedigree	1
medicine	1
chirality	1
symbiont	1
chaos	1
maximum-likelihood	1
parsing	1
graphs	1
alignment_methods	1
projy	1
signal	1
sensor	1
population_size	1
spectroscopy	1
education	1
gwa	1
revision_control	1
genetic_drift	1
tools	1
chromatin	1
psychology	1
mcmc	1
stress	1
probability_distribution	1
nlp	1
mechanotransduction	1
ligand	1
key	1
episome	1
genotypes	1
mutagenesis	1
taxonomy	1
phytoplasma	1
citation_count	1
phylogenetic_footprint	1
transcription_factors	1
metaproteomics	1
adaptive_evolution	1
subversion	1
tree_visualization	1
nucleosome	1
sage	1
hmms	1
behaviour	1
random_sampling	1
substitution_rates	1
retraction	1
human_genome	1
game	1
paper_ideas	1
botany	1
misc	1
stm	1
structural_genomics	1
bibtex	1
projk	1
nmr	1
gene_prediction	1
interference	1
hpc	1
integration	1
line	1
plasticity	1
variation	1
parsimony	1
proteins	1
receptor	1
microfluidic	1
ancient_dna	1
grammars	1
endophytes	1

operon's assembly [17 articles] Export

operon's tags