pansapiens's evolution [32 articles] Export

Recent papers added to pansapiens's library classified by the tag evolution. You can also see everyone's evolution.

	Phylogenetic Analysis and Gene Functional Predictions: Phylogenomics in Action [My Copy] Theoretical Population Biology, Vol. 61, No. 4. (01 June 2002), pp. 481-487. by J. Eisen posted to sequence phylogeny phylogenetics methods evolution bioinformatics by pansapiens on 2009-09-28 07:45:57 as
	The Closest BLAST Hit Is Often Not the Nearest Neighbor [My Copy] Journal of Molecular Evolution, Vol. 52, No. 6. (24 June 2001), pp. 540-542. by Liisa B. Koski, G. Brian Golding posted to sequence phylogeny phylogenetics methods evolution blast bioinformatics by pansapiens on 2009-09-28 07:18:35 as along with 6 people and 3 groups ana dayjm mycitation indigoviolet AaronDarling cerca structural_bioinformatics Bioinformatics EisenLab
	Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis. [My Copy] Genome research, Vol. 8, No. 3. (1 March 1998), pp. 163-167. by J. A. Eisen posted to sequence review phylogeny phylogenetics methods evolution bioinformatics by pansapiens on 2009-09-28 07:04:29 as along with 4 people AaronDarling druvus gjuggler sgoetz
	Protein sectors: evolutionary units of three-dimensional structure. [My Copy] Cell, Vol. 138, No. 4. (21 August 2009), pp. 774-786. by Najeeb Halabi, Olivier Rivoire, Stanislas Leibler, Rama Ranganathan posted to structure protein evolution correlated_mutations by pansapiens on 2009-09-22 05:42:53 as along with 10 people and 1 group yyfwuhan cmzmasek dgront robfsouza pablocarb vvoorr biomcgary dayjm jwm jbhiatt Marcotte_Lab
	Ortholog detection using the reciprocal smallest distance algorithm. [My Copy] Methods Mol Biol, Vol. 396 (2007), pp. 95-110. by D. P. Wall, T. Deluca posted to phylogeny orthologs evolution bioinformatics by pansapiens on 2009-09-03 23:32:47 as along with 4 people maximilianh dquest operon cerca
	When it comes to homology, bad habits die hard [My Copy] Trends in Biochemical Sciences (30 January 2009) by A. Marabotti, A. Facchiano posted to evolution homology literature protein sequence by pansapiens on 2009-01-31 22:33:59 as along with 4 people mmourez carlosjavierna fgibson reyez
	The Dynamics and Time Scale of Ongoing Genomic Erosion in Symbiotic Bacteria [My Copy] Science, Vol. 323, No. 5912. (16 January 2009), pp. 379-382. by Nancy A. Moran, Heather J. Mclaughlin, Rotem Sorek posted to bacteria endosymbiosis evolution genomics symbiosis by pansapiens on 2009-01-20 00:11:10 as along with 7 people and 2 groups kinestetika JeremyZucker emptyhb abizar behindtherabbit bpb djkt MetabolicModeling iSEEM
	Questioning the Ubiquity of Neofunctionalization [My Copy] PLoS Comput Biol, Vol. 5, No. 1. (2 January 2009), e1000252. by Todd A. Gibson, Debra S. Goldberg posted to evolution function neofunctionalization protein by pansapiens on 2009-01-06 20:58:09 as along with 7 people winterschlaefer JustinCrocker pinney VGreiff druvus cabbagesofdoom djkt
	Neutralism and selectionism: a network-based reconciliation. [My Copy] Nature reviews. Genetics, Vol. 9, No. 12. (29 December 2008), pp. 965-974. by A. Wagner posted to evolution protein by pansapiens on 2008-11-26 04:33:22 as along with 10 people gwallau operon chica ilyashl Petersarkies ccots lp2 renewang pkonings gjuggler
	Palaeotemperature trend for Precambrian life inferred from resurrected proteins [My Copy] Nature, Vol. 451, No. 7179. (7 February 2008), pp. 704-707. by Eric A. Gaucher, Sridhar Govindarajan, Omjoy K. Ganesh posted to biophysics evolution folding protein stability by pansapiens on 2008-11-03 04:25:03 as along with 2 people cactus biomcgary
	Can correlated mutations in protein domain families be used for protein design? [My Copy] Briefings in Bioinformatics, Vol. 2 (September 2001), pp. 279-88. by S. B. Nagl posted to computational-biology drug-resistance evolution hiv-1 humans microbial molecular mutation protein_engineering protein-engineering protein-structure tertiary zotero-import by pansapiens on 2008-08-13 06:29:35 as
	Origin of mitochondria by intracellular enslavement of a photosynthetic purple bacterium. [My Copy] Proc Biol Sci, Vol. 273, No. 1596. (7 August 2006), pp. 1943-1952. by T. Cavalier-Smith posted to endosymbiosis evolution mitochondria by pansapiens on 2006-07-26 02:09:53 as along with 1 person margamvm
	Using information theory to search for co-evolving residues in proteins [My Copy] Bioinformatics, Vol. 21, No. 22. (13 September 2005), pp. bti671-4124. by L. C. Martin, G. B. Gloor, S. D. Dunn, L. M. Wahl posted to alignment conservation evolution information_theory protein by pansapiens on 2006-06-30 05:26:15 as along with 1 person mgomes
	SIMPROT: Using an empirically determined indel distribution in simulations of protein evolution [My Copy] BMC Bioinformatics, Vol. 6, No. 1. (2005) by Andy Pang, Andrew Smith, Paulo Nuin, Elisabeth Tillier posted to bioinformatics evolution protein by pansapiens on 2006-06-09 12:23:39 as along with 2 people gjuggler martainn
	Statistical distributions of optimal global alignment scores of random protein sequences [My Copy] BMC Bioinformatics, Vol. 6, No. 1. (2005) by Hongxia Pang, Jiaowei Tang, Su S. Chen, Shiheng Tao posted to alignment bioinformatics evolution homology sequence by pansapiens on 2006-06-09 07:45:16 as
	Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution. [My Copy] Plant Cell, Vol. 16, No. 7. (July 2004), pp. 1679-1691. by G. Blanc, K. H. Wolfe posted to arabidopsis evolution gene_duplication redundancy by pansapiens on 2006-06-09 04:34:10 as along with 4 people and 1 group Schmidtc cmm echinotrix RamuAnandakrishnan FAB-lab
	Do Proteins Learn to Evolve? The Hopfield Network as a Basis for the Understanding of Protein Evolution [My Copy] Journal of Theoretical Biology, Vol. 202, No. 1. (07 January 2000), pp. 77-86. by Leighton Pritchard, Mark J. Dufton posted to evolution protein structure by pansapiens on 2006-05-29 04:58:20 as along with 3 people and 1 group LeightonP stevanspringer cmm FAB-lab
	Scoring residue conservation. [My Copy] Proteins, Vol. 48, No. 2. (1 August 2002), pp. 227-241. by W. S. Valdar posted to alignment bioinformatics conservation evolution methods protein review sequence by pansapiens on 2006-05-04 07:17:02 as along with 6 people and 2 groups barry bicko sriram_s cjeans sobolevnrm marti structural_bioinformatics Bioinformatics
	Darwinian Evolution Can Follow Only Very Few Mutational Paths to Fitter Proteins [My Copy] Science, Vol. 312, No. 5770. (7 April 2006), pp. 111-114. by Daniel M. Weinreich, Nigel F. Delaney, Mark A. Depristo, Daniel L. Hartl posted to enzyme evolution protein by pansapiens on 2006-05-01 07:31:28 as along with 14 people and 5 groups stevanspringer barry imouthesmp dayjm Einat marcius i41m nirfriedman cmm RowanBarrett ramensky Vaquero Ema bpcusack structural_bioinformatics Bioinformatics FAB-lab BioinfoCIPF SGU-CIPF
	The Evolutionary Rate of a Protein Is Influenced by Features of the Interacting Partners [My Copy] Molecular Biology and Evolution, Vol. 23, No. 4. (April 2006), pp. 784-789. by Takashi Makino, Takashi Gojobori posted to evolution interactions protein by pansapiens on 2006-04-04 05:25:35 as
	Evolution of circular permutations in multidomain proteins. [My Copy] Mol Biol Evol, Vol. 23, No. 4. (April 2006), pp. 734-743. by J. Weiner, E. Bornberg-Bauer posted to evolution protein by pansapiens on 2006-04-04 05:23:24 as along with 2 people martainn tny
	Subfunctionalization of duplicated genes as a transition state to neofunctionalization. [My Copy] BMC Evol Biol, Vol. 5, No. 1. (14 April 2005) by S. Rastogi, D. A. Liberles posted to duplication evolution neofunctionalization protein by pansapiens on 2005-11-07 06:27:18 as along with 2 people azazello dandaman
	Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution. [My Copy] Genetics, Vol. 169, No. 2. (February 2005), pp. 1157-1164. by X. He, J. Zhang posted to duplication evolution neofunctionalization protein by pansapiens on 2005-11-07 06:17:25 as along with 5 people clearbluespring azazello ushishir nirfriedman bluto
	Convergent neofunctionalization by positive Darwinian selection after ancient recurrent duplications of the xanthine dehydrogenase gene. [My Copy] Proc Natl Acad Sci U S A, Vol. 100, No. 23. (11 November 2003), pp. 13413-13417. by F. Rodríguez-Trelles, R. Tarrío, F. J. Ayala posted to duplication evolution neofunctionalization protein by pansapiens on 2005-11-07 06:09:16 as
	Exon shuffling and other ways of module exchange. [My Copy] Matrix Biol, Vol. 15, No. 5. (November 1996) by L. Patthy posted to domain evolution exon intron protein shuffling by pansapiens on 2005-08-26 02:32:26 as
	Introns and gene evolution. [My Copy] Genes Cells, Vol. 1, No. 6. (June 1996), pp. 493-505. by S. J. de Souza, M. Long, W. Gilbert posted to evolution exon intron shuffling by pansapiens on 2005-08-26 02:31:16 as
	Genetic redundancy caused by gene duplications and its evolution in networks of transcriptional regulators. [My Copy] Biol Cybern, Vol. 74, No. 6. (June 1996), pp. 557-567. by A. Wagner posted to evolution gene_duplication redundancy by pansapiens on 2005-08-26 02:29:39 as
	How old is your fold? [My Copy] Bioinformatics, Vol. 21 Suppl 1 (1 June 2005) by H. F. Winstanley, S. Abeln, C. M. Deane posted to evolution fold phylogeny protein by pansapiens on 2005-08-15 09:22:06 as along with 2 people and 2 groups ana cdeane structural_bioinformatics Bioinformatics
	Fold change in evolution of protein structures. [My Copy] J Struct Biol, Vol. 134, No. 2-3. (n 2001), pp. 167-185. by N. V. Grishin posted to evolution protein structure by pansapiens on 2005-03-28 07:31:53 as along with 7 people and 2 groups robfsouza tomhebbron matzke ana barry krishnaJCSG martainn structural_bioinformatics Bioinformatics
	Imprint of evolution on protein structures. [My Copy] Proc Natl Acad Sci U S A, Vol. 101, No. 9. (2 March 2004), pp. 2846-2851. by G. Tiana, B. E. Shakhnovich, N. V. Dokholyan, E. I. Shakhnovich posted to evolution lattice protein structure theory by pansapiens on 2005-03-23 05:39:15 as along with 2 people and 2 groups ana barry structural_bioinformatics Bioinformatics
	Understanding hierarchical protein evolution from first principles. [My Copy] J Mol Biol, Vol. 312, No. 1. (7 September 2001), pp. 289-307. by N. V. Dokholyan, E. I. Shakhnovich posted to evolution folding lattice protein structure theory by pansapiens on 2005-03-23 05:38:21 as along with 3 people and 2 groups mdimmic ana barry structural_bioinformatics Bioinformatics
	The relation between the divergence of sequence and structure in proteins. [My Copy] The EMBO journal, Vol. 5, No. 4. (April 1986), pp. 823-826. by C. Chothia, A. M. Lesk posted to evolution protein structure by pansapiens on 2005-03-23 04:38:38 as along with 13 people and 6 groups martainn ucbcjbm bertelsen semin sgoetz cen4ik ana jwm Einat marcius xdeupi ffranca insectopalo structural_bioinformatics Radiation_Damage Stressosome Bioinformatics BioinfoCIPF SGU-CIPF

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protein	213
zotero-import	132
membrane	108
structure	84
beta_barrel	42
omp85	37
evolution	32
modelling	32
bioinformatics	31
sam50	22
sam_complex	22
sequence	18
methods	15
nmr	15
protein_engineering	14
alignment	13
bacteria	13
review	13
dna	10
folding	9
mitochondria	9
prediction	9
dynamics	8
import	8
sam35sam37	8
crystallography	7
interactions	7
molbiol	7
mitochondrial	6
outer_membrane	6
software	6
expression	5
function	5
helix	5
homology	5
motif	5
phylogeny	5
purification	5
synthetic_biology	5
biology	4
blast	4
chaperone	4
disorder	4
fat_virus	4
genomics	4
lipid	4
neofunctionalization	4
obesity	4
pore	4
proteins	4
search	4
vdac	4
virus	4
assembly	3
autotransporter	3
comparison	3
computation	3
conformation	3
conservation	3
duplication	3
endosymbiosis	3
hmm	3
network	3
phylogenetics	3
porin	3
secretion	3
similarity	3
tools	3
tpr	3
transport	3
14-3-3	2
a2	2
bilayer	2
binding	2
casein	2
chaperones	2
chemistry	2
cloning	2
collaboration	2
correlated_mutations	2
database	2
domain	2
drug_design	2
electrostatic	2
engineering	2
exon	2
fold	2
gene_duplication	2
gram-negative	2
gram-positive	2
graph	2
intron	2
lattice	2
lipoprotein	2
liposome	2
macpf	2
md	2
mdm10	2
mdm12	2
milk	2
mmm1	2
multimer	2
peptide	2
periplasmic	2
protease	2
redundancy	2
science	2
shuffling	2
stability	2
statistics	2
structural	2
surface	2
taxonomy	2
theory	2
theromdynamics	2
two-partner	2
vectors	2
visualization	2
active	1
adhesins	1
afm	1
algorithm	1
amphiphilicity	1
analysis	1
analytical	1
ap4a	1
apoptosis	1
arabidopsis	1
aspartate	1
backbone	1
beta	1
beta-strand	1
bibliometrics	1
bicelle	1
biofuel	1
biophysics	1
biopython	1
celegans	1
cell_wall	1
channel	1
chemical_shift	1
cheminformatics	1
chloroplasts	1
circuits	1
citation	1
code	1
coiled-coil	1
cold	1
compartment	1
complex	1
computational	1
computational-biology	1
construct	1
counter	1
crystalization	1
culture	1
databases	1
design	1
development	1
differentiation	1
dipole	1
disease	1
drug	1
drug-resistance	1
drugs	1
ecoli	1
electrophysiology	1
eletrostatic	1
encapsulin	1
environment	1
enzyme	1
enzymes	1
er	1
exported	1
extremeophile	1
fimbriae	1
gpu	1
gut	1
histidine-kinase	1
hiv-1	1
hmmer	1
hsp70	1
human	1
humans	1
hydrogen_bonding	1
hydrolase	1
information_theory	1
inhibitors	1
inner_membrane	1
ion	1
isoform	1
j-domain	1
kinase	1
kinetics	1
large	1
ldao	1
library	1
ligand	1
ligand_binding	1
ligation	1
literature	1
loop	1
lysin	1
lytic	1
machine_learning	1
malaria	1
mathematics	1
metagenomics	1
metaxin	1
microbial	1
molecular	1
molecular_replacement	1
motifs	1
mutagenesis	1
mutation	1
normal_modes	1
of	1
online	1
open_source	1
orthologs	1
outer	1
overexpression	1
parasite	1
pca	1
pepstatin	1
peptidoglycan	1
perforin	1
peripheral	1
permeability	1
pilus	1
plasmodium	1
plastid	1
portal	1
probability	1
propeller	1
proteases	1
protein-engineering	1
protein-structure	1
protocols	1
quackery	1
rare_codons	1
refolding	1
regulation	1
repeat	1
repeat_proteins	1
repeats	1
restriction_enzyme	1
ribosome	1
rosetta	1
salt_bridge	1
secondary	1
secreted	1
sec-translocon	1
sequence_complexity	1
sequence_logo	1
sequencing	1
signaling	1
simulation	1
site	1
skp	1
snps	1
solid_state	1
sorting	1
stress	1
svm	1
symbiosis	1
targeting	1
tertiary	1
tetratricopeptide	1
therapy	1
thermophile	1
tom20	1
toxin	1
two-component	1
ultracentrifugation	1
unfolding	1
urea	1
vault	1
virulence	1
wd_repeat	1
web	1
web_based	1
yeast	1

pansapiens's evolution [32 articles] Export

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