CodonO: codon usage bias analysis within and across genomes. Export

@article{citeulike:1357235, abstract = {Synonymous codon usage biases are associated with various biological factors, such as gene expression level, gene length, gene translation initiation signal, protein amino acid composition, protein structure, tRNA abundance, mutation frequency and patterns, and GC compositions. Quantification of codon usage bias helps understand evolution of living organisms. A codon usage bias pipeline is demanding for codon usage bias analyses within and across genomes. Here we present a CodonO webserver service as a user-friendly tool for codon usage bias analyses across and within genomes in real time. The webserver is available at http//www.sysbiology.org/CodonO. Contact: wanhenry@yahoo.com.}, address = {Systems Biology Laboratory, Department of Microbiology, Miami University, Oxford, OH 45056, USA.}, author = {Angellotti, Michael C C. and Bhuiyan, Shafquat B B. and Chen, Guorong and Wan, Xiu-Feng F.}, citeulike-article-id = {1357235}, citeulike-linkout-0 = {http://view.ncbi.nlm.nih.gov/pubmed/17537810}, citeulike-linkout-1 = {http://www.hubmed.org/display.cgi?uids=17537810}, day = {30}, issn = {1362-4962}, journal = {Nucleic Acids Res}, keywords = {bias, codon}, month = {May}, posted-at = {2007-09-25 19:35:03}, priority = {2}, title = {CodonO: codon usage bias analysis within and across genomes.}, url = {http://view.ncbi.nlm.nih.gov/pubmed/17537810}, year = {2007} }

TY - JOUR ID - citeulike:1357235 L3 - citeulike-article-id:1357235 N2 - Synonymous codon usage biases are associated with various biological factors, such as gene expression level, gene length, gene translation initiation signal, protein amino acid composition, protein structure, tRNA abundance, mutation frequency and patterns, and GC compositions. Quantification of codon usage bias helps understand evolution of living organisms. A codon usage bias pipeline is demanding for codon usage bias analyses within and across genomes. Here we present a CodonO webserver service as a user-friendly tool for codon usage bias analyses across and within genomes in real time. The webserver is available at http//www.sysbiology.org/CodonO. Contact: wanhenry@yahoo.com. JF - Nucleic Acids Res SN - 1362-4962 AD - Systems Biology Laboratory, Department of Microbiology, Miami University, Oxford, OH 45056, USA. TI - CodonO: codon usage bias analysis within and across genomes. KW - bias KW - codon AU - Angellotti, Michael C AU - Bhuiyan, Shafquat B AU - Chen, Guorong AU - Wan, Xiu-Feng PY - 2007/05/30/ UR - http://view.ncbi.nlm.nih.gov/pubmed/17537810 ER -