paszkows's algorithm [11 articles] Export

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	Rotation Testing in Gene Set Enrichment Analysis for Small Direct Comparison Experiments [My Copy] Statistical Applications in Genetics and Molecular Biology, Vol. 8, No. 1. (January 2009) by Guro Dørum, Lars Snipen, Margrete Solheim, Solve Sæbø posted to algorithm enrichment gene-set-enrichment-analysis gsea permutation rotation statistical-testing statistics by paszkows on 2009-07-28 13:33:30 as
	Rotation tests [My Copy] Statistics and Computing, Vol. 15, No. 1. (1 January 2005), pp. 53-60. by Øyvind Langsrud posted to algorithm microarray permutation rotation significance statistical-testing statistics by paszkows on 2009-07-28 13:10:05 as
	Hit selection with false discovery rate control in genome-scale RNAi screens. [My Copy] Nucleic acids research, Vol. 36, No. 14. (August 2008), pp. 4667-4679. by X. D. Zhang, P. F. Kuan, M. Ferrer, et al.X. Shu, Y. C. Liu, A. T. Gates, P. Kunapuli, E. M. Stec, M. Xu, S. D. Marine, D. J. Holder, B. Strulovici, J. F. Heyse, A. S. Espeseth posted to algorithm bayesian fdr hit-selection rnai screening statistics by paszkows on 2009-04-23 15:33:21 as along with 3 people aviad_work aramesh2 guhjy
	PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes. [My Copy] Nature genetics, Vol. 34, No. 3. (July 2003), pp. 267-273. by Vamsi K. Mootha, Cecilia M. Lindgren, Karl-Fredrik F. Eriksson, et al.Aravind Subramanian, Smita Sihag, Joseph Lehar, Pere Puigserver, Emma Carlsson, Martin Ridderstråle, Esa Laurila, Nicholas Houstis, Mark J. Daly, Nick Patterson, Jill P. Mesirov, Todd R. Golub, Pablo Tamayo, Bruce Spiegelman, Eric S. Lander, Joel N. Hirschhorn, David Altshuler, Leif C. Groop posted to algorithm gene-expression gene-profiling gene-set-enrichment-analysis microarray statistical-testing statistics by paszkows on 2009-03-20 11:20:02 as along with 10 people and 2 groups jperkins yaredo ipark-kaist dragonrez maryee ealloza giovanni shikin magusina heliopais BioinfoCIPF GeschwindLab
	Visualization of genomic data with the Hilbert curve [My Copy] Bioinformatics, Vol. 25, No. 10. (15 May 2009), pp. 1231-1235. by Simon Anders posted to algorithm genome-browser hilbert-curve software visualization by paszkows on 2009-03-19 10:12:54 as along with 15 people and 1 group Yanno jfr jandot ewilban1 polivares inesdesantiago djkt behindtherabbit guhjy humburg Thaverkamp svenrahmann jmeppley idonaldson rdiaz BergmanLab
	Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles [My Copy] Proceedings of the National Academy of Sciences of the United States of America In Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550. by Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha, et al.Sayan Mukherjee, Benjamin L. Ebert, Michael A. Gillette, Amanda Paulovich, Scott L. Pomeroy, Todd R. Golub, Eric S. Lander, Jill P. Mesirov posted to algorithm enrichment gene-expression gene-profiling gene-selection gene-set-enrichment-analysis gsea significance statistical-testing statistics by paszkows on 2009-01-29 10:07:26 as along with 48 people and 4 groups mysickova buyske bertelsen Jporci gbloeb miskar giovenko greg dolchan pattersonee mhamidi jperkins zufar ptrobajo antonkratz yaredo tmmurali VGreiff daforerog ipark-kaist ajbattle jessopher askrajiv idonaldson ihpark chrisamiller dragonrez jfr balajis maryee xwbcn hpiwowar aviad_work ealloza jdiggans jeremymiller frohike hawkeyehammer schuylrp natstreet heliopais shikin waghsk roys ellakat srp33 sgoetz AbnerCYH Bioinformatics BioinfoCIPF GeschwindLab Indigene
	Testing significance relative to a fold-change threshold is a TREAT. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 6. (15 March 2009), pp. 765-771. by Davis J. McCarthy, Gordon K. Smyth posted to algorithm bioconductor fdr microarray r significance statistical-testing statistics by paszkows on 2009-01-29 09:50:59 as along with 12 people and 1 group shikin jfr VGreiff lwaldron rschulz kmdaily rdiaz heliopais dswan bertelsen guhjy renatomilani Bioinformatics
	Process Validation and Screen Reproducibility in High-Throughput Screening [My Copy] J Biomol Screen, Vol. 14, No. 1. (1 January 2009), pp. 66-76. by Isabel Coma, Liz Clark, Emilio Diez, et al.Gavin Harper, Jesus Herranz, Glenn Hofmann, Mark Lennon, Nicola Richmond, Manuel Valmaseda, Ricardo Macarron posted to algorithm high-throughput normalization pipeline robust-mean screening statistics validation by paszkows on 2009-01-27 11:04:25 as
	Bayesian optimal discovery procedure for simultaneous significance testing. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 5. by Jing Cao, Xian-Jin J. Xie, Song Zhang, Angelique Whitehurst, Michael A. White posted to algorithm fdr r significance statistical-testing statistics by paszkows on 2009-01-07 11:13:13 as along with 5 people bertelsen rdiaz guhjy lptolik pkonings
	GSEA-SNP: Applying Gene Set Enrichment Analysis to SNP data from genome-wide association studies [My Copy] Bioinformatics (14 October 2008), btn516. by Marit Holden, Shiwei Deng, Leszek Wojnowski, Bettina Kulle posted to algorithm association-mapping enrichment gene-set-enrichment-analysis gsea high-throughput r snp software statistics by paszkows on 2008-10-15 09:54:22 as along with 9 people and 1 group kimorley TRHvidsten jfr Zephyrus wimufi guhjy akmanning AbnerCYH sg45653 Roswell Cancer Crosstalk
	A probabilistic generative model for GO enrichment analysis [My Copy] Nucl. Acids Res. (1 August 2008), gkn434. by Yong Lu, Roni Rosenfeld, Itamar Simon, Gerard J. Nau, Ziv Bar-Joseph posted to algorithm enrichment fdr gene-expression gene-ontology go microarray statistics by paszkows on 2008-10-02 16:24:57 as along with 10 people jfr guhjy inesdesantiago yaredo rdiaz barriot waszak tmmurali raiyar jandot

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statistics	40
file-import-09-02-02	20
gene-expression	19
web-tool	18
microarray	18
enrichment	16
gene-ontology	14
statistical-testing	14
software	12
high-throughput	12
algorithm	11
go	11
gene-set-enrichment-analysis	9
fdr	9
database	8
r	7
meta-analysis	6
rnai	6
significance	6
review	6
screening	6
web-service	6
clustering	5
pipeline	5
gsea	5
contingency-table	5
normalization	4
pluripotency	4
permutation	4
das	4
gene-selection	4
validation	4
similarity	4
interrater-agreement	3
bioconductor	3
association-mapping	3
pathway	3
standard	3
stem-cell	3
gene-profiling	3
hit-selection	3
phenotype	3
time-course	3
principal-components-analysis	2
variable-weighting	2
pca	2
distance	2
categorical-data-analysis	2
visualization	2
qtl	2
chip-chip	2
mann-whitney-u	2
bayesian	2
genome-browser	2
least-squares	2
rotation	2
linear-model	2
sequence	2
cohens-kappa	2
semantic-similarity	2
sequence-alignment	2
embryonic-stem-cells	2
proteins	2
esirna	2
framework	2
community	2
yules-y	2
scowlp	1
weighted-euclidean	1
model	1
paf1	1
ebi	1
genotype	1
microelectronics	1
alignment	1
panther-database	1
excel	1
scop	1
rho	1
goa	1
tumor	1
local-alignment	1
hypergeometric	1
ultrametric-trees	1
dynamics	1
relative-difference	1
biomart	1
evolution	1
clustering-evaluation	1
silhouette	1
protein-interaction	1
web-20	1
correlation	1
oct4	1
rank-order-statistic	1
monte-carlo	1
hidden-markov-model	1
lexical-taxonomy	1
robust-mean	1
e-learning	1
caenorhabditis-elegans	1
heat-transfer	1
hilbert-curve	1
dynamic-programming	1
format	1
structure	1
internal-consistency	1
variable-importance	1
multivariate-association	1
kmeans	1
benjamini-hochberg	1
ora	1
discrimination	1
odds-ratio	1
mendel	1
cluster-stability	1
nanog	1
multiple-comparisons	1
snp	1
repeatability	1
protein-family	1
hierarchical-clustering	1
nucleotide-substitution	1
classification	1
simulation	1
sam	1
sema	1
dissimilarity	1
pfam	1
kinase	1
information	1

paszkows's algorithm [11 articles] Export

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