paszkows's gene-set-enrichment-analysis [9 articles] Export

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	Rotation Testing in Gene Set Enrichment Analysis for Small Direct Comparison Experiments [My Copy] Statistical Applications in Genetics and Molecular Biology, Vol. 8, No. 1. (January 2009) by Guro Dørum, Lars Snipen, Margrete Solheim, Solve Sæbø posted to algorithm enrichment gene-set-enrichment-analysis gsea permutation rotation statistical-testing statistics by paszkows on 2009-07-28 13:33:30 as
	Gene set enrichment analysis for non-monotone association and multiple experimental categories [My Copy] BMC Bioinformatics, Vol. 9 (14 November 2008), 481. by Rongheng, Leping Li posted to association-mapping gene-set-enrichment-analysis meta-analysis microarray pathway phenotype statistics by paszkows on 2009-03-20 11:27:45 as along with 7 people jfr heliopais tg150 guhjy imina lptolik barriot
	PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes. [My Copy] Nature genetics, Vol. 34, No. 3. (July 2003), pp. 267-273. by Vamsi K. Mootha, Cecilia M. Lindgren, Karl-Fredrik F. Eriksson, et al.Aravind Subramanian, Smita Sihag, Joseph Lehar, Pere Puigserver, Emma Carlsson, Martin Ridderstråle, Esa Laurila, Nicholas Houstis, Mark J. Daly, Nick Patterson, Jill P. Mesirov, Todd R. Golub, Pablo Tamayo, Bruce Spiegelman, Eric S. Lander, Joel N. Hirschhorn, David Altshuler, Leif C. Groop posted to algorithm gene-expression gene-profiling gene-set-enrichment-analysis microarray statistical-testing statistics by paszkows on 2009-03-20 11:20:02 as along with 10 people and 2 groups jperkins yaredo ipark-kaist dragonrez maryee ealloza giovanni shikin magusina heliopais BioinfoCIPF GeschwindLab
	Statistical concerns about the GSEA procedure. [My Copy] Nat Genet, Vol. 36, No. 7. (July 2004) by D. Damian, M. Gorfine posted to gene-set-enrichment-analysis by paszkows on 2009-03-20 11:16:49 as along with 3 people and 1 group ealloza schuylrp heliopais BioinfoCIPF
	GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists. [My Copy] BMC bioinformatics, Vol. 10 (03 February 2009), 48. by Eran Eden, Roy Navon, Israel Steinfeld, Doron Lipson, Zohar Yakhini posted to enrichment gene-ontology gene-set-enrichment-analysis high-throughput hypergeometric statistical-testing statistics web-tool by paszkows on 2009-02-04 16:09:30 as along with 8 people and 1 group Effie guhjy RamuAnandakrishnan kshameer renatomilani grahamc cmzmasek jmeppley NaCTeM
	Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles [My Copy] Proceedings of the National Academy of Sciences of the United States of America In Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550. by Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha, et al.Sayan Mukherjee, Benjamin L. Ebert, Michael A. Gillette, Amanda Paulovich, Scott L. Pomeroy, Todd R. Golub, Eric S. Lander, Jill P. Mesirov posted to algorithm enrichment gene-expression gene-profiling gene-selection gene-set-enrichment-analysis gsea significance statistical-testing statistics by paszkows on 2009-01-29 10:07:26 as along with 48 people and 4 groups mysickova buyske bertelsen Jporci gbloeb miskar giovenko greg dolchan pattersonee mhamidi jperkins zufar ptrobajo antonkratz yaredo tmmurali VGreiff daforerog ipark-kaist ajbattle jessopher askrajiv idonaldson ihpark chrisamiller dragonrez jfr balajis maryee xwbcn hpiwowar aviad_work ealloza jdiggans jeremymiller frohike hawkeyehammer schuylrp natstreet heliopais shikin waghsk roys ellakat srp33 sgoetz AbnerCYH Bioinformatics BioinfoCIPF GeschwindLab Indigene
	Computation of significance scores of unweighted Gene Set Enrichment Analyses [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007) by Andreas Keller, Christina Backes, Hans P. Lenhof posted to dynamic-programming enrichment gene-set-enrichment-analysis gsea statistical-testing statistics by paszkows on 2008-12-22 10:50:59 as along with 5 people and 1 group jfr ealloza shigepong GeeSharpMinor heliopais BioinfoCIPF
	GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (2008) by A. Keller, C. Backes, M. Al-Awadhi, et al.A. Gerasch, J. Küntzer, O. Kohlbacher, M. Kaufmann, H. P. Lenhof posted to enrichment gene-expression gene-ontology gene-set-enrichment-analysis gsea high-throughput meta-analysis microarray ora pathway pipeline web-tool by paszkows on 2008-12-22 10:46:29 as along with 7 people and 1 group guhjy jfr nuin dswan renatomilani druvus reyez Bioinformatics
	GSEA-SNP: Applying Gene Set Enrichment Analysis to SNP data from genome-wide association studies [My Copy] Bioinformatics (14 October 2008), btn516. by Marit Holden, Shiwei Deng, Leszek Wojnowski, Bettina Kulle posted to algorithm association-mapping enrichment gene-set-enrichment-analysis gsea high-throughput r snp software statistics by paszkows on 2008-10-15 09:54:22 as along with 9 people and 1 group kimorley TRHvidsten jfr Zephyrus wimufi guhjy akmanning AbnerCYH sg45653 Roswell Cancer Crosstalk

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statistics	40
file-import-09-02-02	20
gene-expression	19
web-tool	18
microarray	18
enrichment	16
gene-ontology	14
statistical-testing	14
software	12
high-throughput	12
algorithm	11
go	11
gene-set-enrichment-analysis	9
fdr	9
database	8
r	7
meta-analysis	6
rnai	6
significance	6
review	6
screening	6
web-service	6
clustering	5
pipeline	5
gsea	5
contingency-table	5
normalization	4
pluripotency	4
permutation	4
das	4
gene-selection	4
validation	4
similarity	4
interrater-agreement	3
bioconductor	3
association-mapping	3
pathway	3
standard	3
stem-cell	3
gene-profiling	3
hit-selection	3
phenotype	3
time-course	3
principal-components-analysis	2
variable-weighting	2
pca	2
distance	2
categorical-data-analysis	2
visualization	2
qtl	2
chip-chip	2
mann-whitney-u	2
bayesian	2
genome-browser	2
least-squares	2
rotation	2
linear-model	2
sequence	2
cohens-kappa	2
semantic-similarity	2
sequence-alignment	2
embryonic-stem-cells	2
proteins	2
esirna	2
framework	2
community	2
yules-y	2
scowlp	1
weighted-euclidean	1
model	1
paf1	1
ebi	1
genotype	1
microelectronics	1
alignment	1
panther-database	1
excel	1
scop	1
rho	1
goa	1
tumor	1
local-alignment	1
hypergeometric	1
ultrametric-trees	1
dynamics	1
relative-difference	1
biomart	1
evolution	1
clustering-evaluation	1
silhouette	1
protein-interaction	1
web-20	1
correlation	1
oct4	1
rank-order-statistic	1
monte-carlo	1
hidden-markov-model	1
lexical-taxonomy	1
robust-mean	1
e-learning	1
caenorhabditis-elegans	1
heat-transfer	1
hilbert-curve	1
dynamic-programming	1
format	1
structure	1
internal-consistency	1
variable-importance	1
multivariate-association	1
kmeans	1
benjamini-hochberg	1
ora	1
discrimination	1
odds-ratio	1
mendel	1
cluster-stability	1
nanog	1
multiple-comparisons	1
snp	1
repeatability	1
protein-family	1
hierarchical-clustering	1
nucleotide-substitution	1
classification	1
simulation	1
sam	1
sema	1
dissimilarity	1
pfam	1
kinase	1
information	1

paszkows's gene-set-enrichment-analysis [9 articles] Export

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