CiteULike: paulschlesinger's alanine [4 articles]

paulschlesinger's tags

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membrane	522
protein	282
apoptosis	209
simulation	154
peptide	122
structure	112
lipid	109
cholesterol	106
binding	100
mitochondria	86
channel	85
cell	76
review	69
bax	65
diffusion	65
interaction	63
bcl-2	62
membranes	61
dynamics	55
fcs	52
pore	51
surface	50
fusion	49
folding	46
bilayer	43
proteins	42
proton	42
activation	41
death	39
molecular	37
analysis	36
mitochondrial	36
transport	36
cells	35
hydrophobic	35
curvature	34
model	34
energy	33
kinetics	33
regulation	33
lateral	32
micelle	32
phase	31
formation	30
receptor	30
channels	28
cytochrome	28
peptides	28
thermodynamics	28
c	27
cardiolipin	27
water	27
domain	26
mechanism	25
tumor	25
bclxl	24
family	23
interactions	23
ion	23
transfer	23
acid	22
activity	22
effect	22
cancer	21
helix	21
liposome	21
toxin	21
bid	20
bim	20
permeability	20
tension	20
antimicrobial	19
vesicles	19
amyloid	18
bh3	18
bak	17
force	17
p53	17
ph	17
solution	17
calcium	16
fluorescence	16
function	16
melittin	16
metabolism	16
sterol	16
transition	16
insertion	15
modeling	15
oxysterol	15
aggregation	14
biology	14
fret	14
interfacial	14
k	14
rafts	14
single	14
vesicle	14
bcl-xl	13
coarse	13
fluctuations	13
fluorescent	13
free	13
monolayer	13
nmr	13
puma	13
size	13
vdac	13
complex	12
detergent	12
mcl-1	12
molecule	12
phospholipid	12
properties	12
transmembrane	12
volume	12
amino	11
atp	11
ceramide	11
conformational	11
enzyme	11
er	11
g	11
influenza	11
inhibitor	11
lysosome	11
orientation	11
pump	11
scattering	11
stability	11
two	11
yeast	11
acids	10
area	10
bilayers	10
chain	10
chloride	10
domains	10
fatty	10
inhibition	10
lipids	10
liposomes	10
micelles	10
microscopy	10
oligomerization	10
small	10
structural	10
theory	10
time	10
virus	10
voltage	10
angle	9
apolipoprotein	9
bacteria	9
caspase	9
cation	9
conformation	9
dimerization	9
disease	9
expression	9
flow	9
landscape	9
ligand	9
line	9
mutation	9
physics	9
pi	9
pressure	9
shape	9
stabilization	9
stress	9
strucutre	9
supported	9
systems	9
transporter	9
x-ray	9
actin	8
bad	8
brownian	8
correlation	8
crowding	8
cyclodextrin	8
effects	8
fluctuation	8
heterogeneity	8
in	8
interface	8
intracellular	8
kinase	8
movement	8
osteoclast	8
pathway	8
receptors	8
red	8
resistance	8
resonance	8
rhodanese	8
scale	8
signalling	8
spr	8
surfactant	8
targeting	8
tryptophan	8
active	7
association	7
atpase	7
behavior	7
carlo	7
cleavage	7
crystal	7
endothelial	7
entropy	7
evolution	7
field	7
gating	7
hydration	7
imaging	7
intramembrane	7
md	7
monte	7
motion	7
nanoparticle	7
nanoparticles	7
neutron	7
oxidase	7
packing	7
phospholipase	7
phospholipids	7
plasmon	7
pores	7
potassium	7
prion	7
selectivity	7
spectroscopy	7
thermal	7
viral	7
adp	6
alzheimer	6
amphipile	6
and	6
anion	6
assembly	6
beta	6
biacore	6
bond	6
calculation	6
charge	6
chemistry	6
comparison	6
complexes	6
composition	6
concentration	6
critical	6
cytoskeleton	6
der	6
distribution	6
fission	6
gene	6
giant	6
grain	6
grained	6
growth	6
helices	6
history	6
hiv	6
index	6
inhibitors	6
integration	6
intrinsically	6
lee08pdf	6
localization	6
mechanics	6
mode	6
na	6
nix	6
normal	6
order	6
particle	6
particles	6
permeabilization	6
phosphorylation	6
polymer	6
potential	6
ptp	6
refractive	6
scanning	6
self	6
solvent	6
sphingomyelin	6
state	6
stochastic	6
surfaces	6
temperature	6
ternary	6
therapy	6
unstructured	6
van	6
afm	5
apoptotic	5
bending	5
block	5
carrier	5
casimir	5
caspase-8	5
cl	5
cooperativity	5
cubic	5
degradation	5
dimer	5
disruption	5
distance	5
docking	5
drug	5
dsc	5
elastic	5
elasticity	5
electrostatic	5
endocytosis	5
exchange	5
fas	5
flip	5
flop	5
fluid	5
fluids	5
frap	5
glycine	5
guv	5
hydrogen	5
induced	5
inhibit	5
inhomogeneous	5
ising	5
langmuir	5
lipoprotein	5
liquid	5
long	5
m2	5
malaria	5
mesotropic	5
mice	5
mobility	5
models	5
multiple	5
nuclear	5
oligomers	5
osmotic	5
pc	5
perturbation	5
pfob	5
proline	5
proteases	5
proteolysis	5
quantum	5
quenching	5
recognition	5
rhomboid	5
salts	5
sds	5
sensitivity	5
separation	5
sequence	5
states	5
suppression	5
survival	5
synthesis	5
thermodynamic	5
transitions	5
translocation	5
waals	5
xray	5
zhang08pdf	5
action	4
adsorption	4
alanine	4
alpha	4
anti	4
approach	4
bile	4
biophysics	4
biosynthesis	4
bone	4
calorimetry	4
cardiac	4
cationic	4
changes	4
charged	4
chemical	4
clc	4
clc-0	4
commentary	4
constant	4
control	4
crac	4
cross	4
c-terminal	4
deformation	4
delivery	4
dependent	4
detergents	4
diabetes	4
disordered	4
dppc	4
droplets	4
dynamic	4
e	4
efflux	4
egfr	4
electron	4
electrostatics	4
em	4
energetics	4
factor	4
fibril	4
forces	4
gases	4
gated	4
globule	4
gramicidin	4
h	4
homology	4
hydrodynamic	4
hydrophobicity	4
identification	4
inclusions	4
incorporation	4
increment	4
induction	4
interfaces	4
ischemia	4
kim08pdf	4
kim09pdf	4
kinetic	4
lamellar	4
langevin	4
large	4
lattice	4
lifetime	4
like	4
lipase	4
lysis	4
macrophage	4
manuscript	4
measurement	4
mechanical	4
membrne	4
mg	4
molten	4
motif	4
of	4
omm	4
optical	4
organization	4
outer	4
oxygen	4
parasite	4
penetration	4
phagosome	4
phases	4
pick	4
protease	4
raft	4
rapid	4
reconstitution	4
region	4
release	4
residues	4
ripening	4
role	4
salt	4
saxs	4
signal	4
signaling	4
sites	4
space	4
spectra	4
statistical	4
sterols	4
surfactants	4
synthase	4
system	4
target	4
tat	4
tnf	4
toxicity	4
trans	4
vacuolar	4
vascular	4
wang09pdf	4
wu08pdf	4
xiap	4
zhang09pdf	4
a2	3
acyl	3
agonists	3
alamethicin	3
amiloid	3
amphipathic	3
amphiphile	3
amphiphiles	3
amphipiles	3
anesthetic	3
anions	3
arginine	3
asymmetric	3
atomic	3
attachment	3
backbone	3
bacterial	3
barriers	3
base	3
based	3
basis	3
bicelles	3
biochemistry	3
bk	3
bleb	3
blocker	3
blood	3
brain	3
budding	3
ca	3
cardiomyocyte	3
catalysis	3
cecropin	3
cellular	3
chains	3
change	3
chen08pdf	3
chloroquine	3
clearance	3
cluster	3
coefficients	3
colicin	3
compound	3
conductance	3
conserved	3
contact	3
correction	3
cryo	3
cytosol	3
defects	3
deficiency	3
deficient	3
delay	3
density	3
design	3
detection	3
determination	3
development	3
differentiation	3
diphtheria	3
displacement	3
drugs	3
dysfunction	3
electrical	3
ensemble	3
environment	3
escrt	3
exchanger	3
experimental	3
extracellular	3
file	3
fold	3
forming	3
gel	3
geometry	3
glycerol	3
golgi	3
gonzal08pdf	3
g-protein	3
groups	3
guvs	3
headgroup	3
hemolysis	3
hexagonal	3
hinge	3
hiv-1	3
hofmeister	3
huang08pdf	3
infection	3
inhomogeneity	3
insulin	3
integrin	3
intrinsic	3
inverted	3
ionization	3
ions	3
islet	3
ksca	3
lammellar	3
lee09pdf	3
li08pdf	3
liu09pdf	3
local	3
macromolecules	3
mammalian	3
marsh09pdf	3
mass	3
match	3
matrix	3
melting	3
membrnae	3
methods	3
microdomains	3
minimum	3
mismatch	3
mitochondira	3
mixed	3
mixtures	3
modulation	3
modulus	3
multicomponent	3
multiscale	3
nanopore	3
nanotube	3
natural	3
negative	3
news	3
npc1	3
ostwald	3
oxidation	3
oxidative	3
oxidized	3
oxysterols	3
pathways	3
perfluorocarbon	3
peripherial	3
pfc	3
phagocytosis	3
photoconversion	3
photon	3
pk	3
plasma	3
point	3
polarization	3
prediction	3
range	3
rbc	3
reaction	3
reconstruction	3
redox	3
regions	3
regualtion	3
remodeling	3
repair	3
response	3
rhodopsin	3
secretion	3
series	3
shear	3
side	3
site	3
smac	3
snare	3
snares	3
solubility	3
solubilization	3
src	3
stern	3
steroid	3
studies	3
study	3
substrate	3
subunit	3
sun08pdf	3
swapping	3
swelling	3
synthetic	3
thickness	3
tilt	3
transcription	3
translocator	3
trehalose	3
tyrosine	3
unfolding	3
unsaturation	3
uptake	3
vesicular	3
views	3
viscosity	3
vivo	3
volmer	3
wang08pdf	3
1	2
2	2
8	2
abc	2
absent	2
absorption	2
abt-737	2
acidic	2
acoustic	2
activate	2
activator	2
addition	2
aggregates	2
albumin	2
alcohols	2
alexan09pdf	2
allosteric	2
ammonia	2
amylod	2
anchored	2
anchoring	2
anesthetics	2
angiogenesis	2
angles	2
anisotropy	2
anomolous	2
antiapoptotic	2
anti-apoptotic	2
antibacterial	2
antigen	2
apotosis	2
application	2
assay	2
atom	2
autophagy	2
avb3	2
beam	2
beclin	2
bfl-1	2
bh4	2
bilyer	2
bind	2
biological	2
blebs	2
boltzmann	2
bond08pdf	2
bound	2
calmodulin	2
capacitance	2
cardiomyocytes	2
caspase-3	2
caspases	2
cations	2
caveolin	2
cavitation	2
cavity	2
cftr	2
characteristics	2
characterization	2
cheleythrine	2
chemotherapy	2
choe09pdf	2
cholera	2
clc-4	2
clic	2
clic1	2
cmc	2
coefficient	2
coil	2
coli	2
collapse	2
colloidal	2
computational	2
consumption	2
continuum	2
cooperative	2
coordinate	2
core	2
course	2
covalent	2
cramide	2
cross-correlation	2
crystallization	2
current	2
cyclophilin	2
cytolytic	2
cytoplasmic	2
data	2
day08pdf	2
defense	2
defensin	2
denaturation	2
dendritic	2
dependence	2
dewetting	2
diagram	2
dickey08pdf	2
difusion	2
dihedral	2
dimensions	2
dipole	2
direct	2
discoidal	2
disorder	2
disposition	2
disulfide	2
dna	2
dopc	2
driven	2
droplet	2
drosophila	2
dspc	2
e4	2
editorial	2
effector	2
egf	2
electric	2
electroformation	2
electroporation	2
endosome	2
endothelium	2
entanglement	2
enviroment	2
enzymes	2
epithelia	2
equation	2
equilibrium	2
ergosterol	2
esr	2
ester	2
ether	2
evaluation	2
experiment	2
failure	2
fast	2
feng09pdf	2
fine	2
fitting	2
fluorinated	2
fluorocarbon	2
fluorocarbons	2
foldamer	2
foramtion	2
fragment	2
functional	2
functions	2
gaba	2
gate	2
genes	2
gfp	2
glucose	2
glutamate	2
gpcr	2
gradient	2
guler09pdf	2
hax1	2
hdl	2
heart	2
heavy	2
helfrich	2
helical	2
her	2
heterogeneities	2
high	2
histone	2
hldl	2
hormone	2
host	2
hu08pdf	2
huang09pdf	2
human	2
hydrocarbon	2
hydroxyapatite	2
hypoxia	2
image	2
immunity	2
independent	2
inflammatory	2
inhibtors	2
integrins	2
interferon	2
intermediates	2
intermembrane	2
intermolecular	2
internal	2
ischemic	2
johanss09pdf	2
jurkat	2
kawai09pdf	2
khodad08pdf	2
kirkwood-buff	2
label	2
lange09pdf	2
lattic	2
leaflet	2
leak	2
lectin	2
lee09apdf	2
li09pdf	2
lifshitz	2
light	2
linear	2
linkage	2
lipd	2
lipopeptides	2
lipotoxicity	2
liu08pdf	2
locksh08pdf	2
lockshin	2
lysozyme	2
lytic	2
m	2
machinery	2
map	2
marangoni	2
matching	2
maturation	2
maximum	2
mdr	2
metals	2
method	2
microinjection	2
mimic	2
miscibility	2
mixture	2
modelling	2
modification	2
molecules	2
monomer	2
morphology	2
motifs	2
muller09pdf	2
multidrug	2
muscle	2
mutant	2
mvb	2
nadh	2
nak	2
nanoemulsions	2
native	2
necrosis	2
neimann	2
network	2
networks	2
neurons	2
nfkb	2
niemann	2
non	2
noncovalent	2
nonlammellar	2
not	2
noxa	2
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number	2
oil	2
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only	2
open	2
organelle	2
osmolytes	2
osteoblast	2
over	2
pa	2
palmitate	2
parameters	2
parenteral	2
partition	2
path	2
per	2
peroxidase	2
petras08pdf	2
peturbation	2
phage	2
philosophy	2
phosphate	2
phosphotidylserine	2
photooxidation	2
poisson-boltzmann	2
popc	2
poration	2
porin	2
post	2
power	2
precursors	2
presequence	2
probe	2
probes	2
process	2
prostate	2
proteosome	2
ps	2
pu09pdf	2
qens	2
rankl	2
ras	2
reactions	2
reduction	2
regulator	2
relationship	2
reperfusion	2
repulsive	2
resorption	2
rheology	2
rodrig08pdf	2
rostov08pdf	2
rotation	2
saddle	2
saposin	2
screen	2
sculpting	2
secretase	2
selection	2
separations	2
shih08pdf	2
shock	2
simulations	2
skin	2
slow	2
solute	2
solutions	2
solvation	2
solvents	2
sorting	2
specificity	2
squamous	2
stable	2
stapled	2
storm	2
strength	2
stroke	2
sun09pdf	2
synuclein	2
systematic	2
t	2
tail	2
talk	2
taylor09pdf	2
tbid	2
testing	2
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tethering	2
thinning	2
threshold	2
tm	2
to	2
topology	2
toxic	2
transbilayer	2
transduction	2
transformation	2
transgenic	2
treatment	2
t-tubule	2
tubules	2
tweezers	2
ultrasound	2
unfolded	2
unilamellar	2
unnatural	2
upreti08pdf	2
ussing	2
vesiculation	2
vitro	2
vldl	2
vpu	2
waal	2
warburg	2
wolfe09pdf	2
wong08pdf	2
xu08pdf	2
yamag09pdf	2
yao09pdf	2
you09pdf	2
yu09pdf	2
zhou09pdf	2
zn	2
0lsson05pdf	1
1985	1
1a	1
25-oh	1
2f2b-cells	1
3d	1
53	1
6	1
aaa-atpase	1
aaatpas	1
aaatpase	1
abad09pdf	1
abbas08pdf	1
ablation	1
abreu03pdf	1
accessibility	1
accumulation	1
acetylation	1
ach	1
acidfication	1
acidification	1
acidity	1
acridine	1
activaiton	1
activates	1
activators	1
additivity	1
adenine	1
adhesion	1
adhesions	1
adipocytes	1
ae2	1
aedans	1
aerbaj03pdf	1
affinity	1
afluid	1
agent	1
agonist	1
ahern08pdf	1
ahn09pdf	1
aif	1
ailer09pdf	1
akimov09pdf	1
alam09apdf	1
alam09pdf	1
alessa07pdf	1
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alignment	1
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alkaline	1
alkane	1
alkanols	1
all	1
alleva08pdf	1
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allosterically	1
allostery	1
almeid09pdf	1
almeida08pdf	1
aloptosis	1
altamir08pdf	1
alternate	1
alternating	1
altherosclerosis	1
alzheimers	1
amantadine	1
amator09pdf	1
amatore09pdf	1
ambrosin09pdf	1
amide	1
amine	1
amitai09pdf	1
amphilie	1
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amplification	1
amuloid	1
analog	1
analogue	1
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ander00pdf	1
ander01pdf	1
ander02apdf	1
anders09pdf	1
andersen	1
andre08pdf	1
anesthesia	1
anethetics	1
anglin09pdf	1
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annexin	1
annotation	1
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ant	1
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apoe	1
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arakaw09pdf	1
archeaa	1
arcisi09pdf	1
arkhip08pdf	1
arnoul08pdf	1
arouri08pdf	1
arsov09pdf	1
arthritis	1
artifact	1
arzoin08pdf	1
ashraf08pdf	1
aspiration	1
aspp	1
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assel08pdf	1
assemble	1
assignment	1
associative	1
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asthan04pdf	1
asymmetry	1
atherosclerosis	1
atomistic	1
atophagy	1
attractive	1
ausli09pdf	1
auth09pdf	1
autoimmune	1
autophagosome	1
autophagosomes	1
avbel09pdf	1
avidin	1
axonal	1
ayton09pdf	1
aytun08pdf	1
b1	1
bacillus	1
backov09pdf	1
bacteriorhodopsin	1
bae09pdf	1
bahar09pdf	1
baier09pdf	1
balakr09pdf	1
balali09pdf	1
balaz09pdf	1
baldwin09pdf	1
bali09pdf	1
balius09pdf	1
ballez09pdf	1
barbet09pdf	1
barik08pdf	1
barnard09pdf	1
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barth	1
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barysch09pdf	1
basic	1
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basu09pdf	1
bates07pdf	1
bates08pdf	1
baver09pdf	1
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beck08pdf	1
beclin-1	1
beel08pdf	1
behaior	1
behrin08pdf	1
beign09pdf	1
belhoc04pdf	1
beliko09pdf	1
benabu09pdf	1
benn94apdf	1
benne94pdf	1
bennet09pdf	1
bennun09pdf	1
bental96pdf	1
benzodiazapine	1
berez08pdf	1
berg09pdf	1
bergs09pdf	1
berko08pdf	1
bernado09pdf	1
berre05pdf	1
bertor02pdf	1
bets	1
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between	1
bhatta08pdf	1
bhatta09pdf	1
bhrf1	1
bialyer	1
bibtex-import	1
bickm09pdf	1
bieder08pdf	1
bier	1
bif	1
bik	1
bilen08pdf	1
billen08pdf	1
bilyers	1
bimolecular	1
biofilms	1
biogenesis	1
bioluminescence	1
biomolecules	1
biopysics	1
biotin	1
bishop88pdf	1
bivas02pdf	1
bjork05pdf	1
bjork08pdf	1
black07pdf	1
blain09pdf	1
blcl-2	1
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	Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine. [My Copy] Protein engineering, Vol. 13, No. 10. (October 2000), pp. 691-695. by K. Masumoto, T. Ueda, H. Motoshima, T. Imoto posted to mutation masumot00pdf lysozyme glycine dihedral angles alanine by paulschlesinger on 2009-10-27 23:28:45 as
	Probing the role of the conserved beta-II turn Pro-76/Gly-77 of mitochondrial cytochrome c. [My Copy] Biochemistry and cell biology = Biochimie et biologie cellulaire, Vol. 85, No. 3. (June 2007), pp. 366-374. by Karen M. Black, Carmichael J. Wallace posted to modulation dihedral cytochrome c black07pdf angle alanine by paulschlesinger on 2009-10-27 23:00:40 as
	Diverse Roles of Glycine Residues Conserved in Photoactive Yellow Proteins☆ [My Copy] Biophysical Journal, Vol. 94, No. 9. (01 May 2008), pp. 3620-3628. by Yasushi Imamoto, Sanae Tatsumi, Miki Harigai, Yoichi Yamazaki, Hironari Kamikubo, Mikio Kataoka posted to omamo08pdf mutation glycine conserved alanine by paulschlesinger on 2009-10-27 22:14:01 as
	Temperature and Pressure Dependence of Alanine Dipeptide Studied by Multibaric−Multithermal Molecular Dynamics Simulations [My Copy] J. Phys. Chem. B (30 August 2008) by Hisashi Okumura, Yuko Okamoto posted to alanine dinamics dipeptide simulation by paulschlesinger on 2008-09-04 00:59:56 as

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