CiteULike is a free online bibliography manager. Register and you can start organising your references online.
Tags

Constant pressure molecular dynamics simulation: The Langevin piston method

by: Scott E. Feller, Yuhong Zhang, Richard W. Pastor, Bernard R. Brooks
The Journal of Chemical Physics, Vol. 103, No. 11. (1995), pp. 4613-4621, doi:10.1063/1.470648  Key: citeulike:2599359

Formatted Citation


Show HTML

Likes (beta)

This copy of the article hasn't been liked by anyone yet.

View FullText article


Abstract

A new method for performing molecular dynamics simulations under constant pressure is presented. In the method, which is based on the extended system formalism introduced by Andersen, the deterministic equations of motion for the piston degree of freedom are replaced by a Langevin equation; a suitable choice of collision frequency then eliminates the unphysical ‘‘ringing’’ of the volume associated with the piston mass. In this way it is similar to the ‘‘weak coupling algorithm’’ developed by Berendsen and co‐workers to perform molecular dynamics simulation without piston mass effects. It is shown, however, that the weak coupling algorithm induces artifacts into the simulation which can be quite severe for inhomogeneous systems such as aqueous biopolymers or liquid/liquid interfaces.


pavanghatty's tags for this article

Citations (CiTO)

No CiTO relationships defined

X There are no reviews yet

X Find related articles from these CiteULike users

X Find related articles with these CiteULike tags

X Posting History


X Export records

Privacy Statement | Terms & Conditions
CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.