pcahan1's library 219 articles Export

	Spatial normalization of array-CGH data [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (2006), 264. by Pierre Neuvial, Philippe Hupe, Isabel Brito, et al.Stephane Liva, Elodie Manie, Caroline Brennetot, Francois Radvanyi, Alain Aurias, Emmanuel Barillot posted to hmm_manu by pcahan1 on 2006-12-11 14:48:29 as along with 2 people and 1 group stharward Garamonfok Bioinformatics
	Evolution of the regulators of G-protein signaling multigene family in mouse and human. [My Copy] Genomics, Vol. 79, No. 2. (February 2002), pp. 177-185. by D. A. Sierra, D. J. Gilbert, D. Householder, et al.N. V. Grishin, K. Yu, P. Ukidwe, S. A. Barker, W. He, T. G. Wensel, G. Otero, G. Brown, N. G. Copeland, N. A. Jenkins, T. M. Wilkie posted to capture phenome by pcahan1 on 2006-11-01 17:31:43 as
	Deficiency or inhibition of Gas6 causes platelet dysfunction and protects mice against thrombosis. [My Copy] Nat Med, Vol. 7, No. 2. (February 2001), pp. 215-221. by A. Angelillo-Scherrer, P. de Frutos, C. Aparicio, et al.E. Melis, P. Savi, F. Lupu, J. Arnout, M. Dewerchin, M. Hoylaerts, J. Herbert, D. Collen, B. Dahlbäck, P. Carmeliet posted to phenome pt by pcahan1 on 2006-11-01 17:19:38 as
	Soluble Axl is generated by ADAM10-dependent cleavage and associates with Gas6 in mouse serum. [My Copy] Mol Cell Biol, Vol. 25, No. 21. (November 2005), pp. 9324-9339. by V. Budagian, E. Bulanova, Z. Orinska, et al.E. Duitman, K. Brandt, A. Ludwig, D. Hartmann, G. Lemke, P. Saftig, S. Bulfone-Paus posted to phenome pt by pcahan1 on 2006-11-01 17:19:09 as
	The protein encoded by a growth arrest-specific gene (gas6) is a new member of the vitamin K-dependent proteins related to protein S, a negative coregulator in the blood coagulation cascade. [My Copy] Mol Cell Biol, Vol. 13, No. 8. (August 1993), pp. 4976-4985. by G. Manfioletti, C. Brancolini, G. Avanzi, C. Schneider posted to phenome pt by pcahan1 on 2006-11-01 17:18:57 as
	Role of Gas-6 in adipogenesis and nutritionally induced adipose tissue development in mice. [My Copy] Arterioscler Thromb Vasc Biol, Vol. 25, No. 5. (May 2005), pp. 1002-1007. by E. Maquoi, G. Vörös, P. Carmeliet, D. Collen, H. R. Lijnen posted to phenome pt by pcahan1 on 2006-11-01 17:18:45 as
	Vitamin K-dependent Gas6 activates ERK kinase and stimulates growth of cardiac fibroblasts. [My Copy] Biochem Biophys Res Commun, Vol. 319, No. 3. (2 July 2004), pp. 871-878. by J. Stenhoff, B. Dahlbäck, S. Hafizi posted to phenome pt by pcahan1 on 2006-11-01 17:18:34 as
	Nicotinic receptors regulate B lymphocyte activation and immune response. [My Copy] Eur J Pharmacol, Vol. 517, No. 3. (11 July 2005), pp. 246-251. by M. Skok, R. Grailhe, J. P. Changeux posted to baso phenome by pcahan1 on 2006-11-01 16:55:22 as
	Thirteen genes (Cebpb, E2f1, Tcf4, Cyp24, Pck1, Acra4, Edn3, Kcnb1, Mc3r, Ntsr, Cd40, Plcg1 and Rcad) that probably lie in the distal imprinting region of mouse chromosome 2 are not monoallelically expressed. [My Copy] Genet Res, Vol. 65, No. 2. (April 1995), pp. 83-93. by C. M. Williamson, E. R. Dutton, C. M. Abbott, C. V. Beechey, S. T. Ball, J. Peters posted to baso phenome by pcahan1 on 2006-11-01 16:54:45 as
	Spontaneous deletion of epilepsy gene orthologs in a mutant mouse with a low electroconvulsive threshold. [My Copy] Hum Mol Genet, Vol. 12, No. 9. (1 May 2003), pp. 975-984. by Y. Yang, B. J. Beyer, J. F. Otto, et al.T. P. O'Brien, V. A. Letts, H. S. White, W. N. Frankel posted to baso phenome by pcahan1 on 2006-11-01 16:54:26 as
	The lethal mutation of the mouse wasted (wst) is a deletion that abolishes expression of a tissue-specific isoform of translation elongation factor 1alpha, encoded by the Eef1a2 gene. [My Copy] Proc Natl Acad Sci U S A, Vol. 95, No. 8. (14 April 1998), pp. 4463-4468. by D. M. Chambers, J. Peters, C. M. Abbott posted to baso phenome by pcahan1 on 2006-11-01 16:46:14 as
	Cytokine and T-cell subset abnormalities in immunodeficient wasted mice. [My Copy] Mol Immunol, Vol. 31, No. 10. (July 1994), pp. 753-759. by C. R. Libertin, L. Ling-Indeck, M. Padilla, G. E. Woloschak posted to baso phenome by pcahan1 on 2006-11-01 16:45:32 as
	Hearing loss associated with the modifier of deaf waddler (mdfw) locus corresponds with age-related hearing loss in 12 inbred strains of mice. [My Copy] Hear Res, Vol. 154, No. 1-2. (April 2001), pp. 45-53. by Q. Y. Zheng, K. R. Johnson posted to hearing phenome by pcahan1 on 2006-11-01 15:35:36 as
	Mutations in a plasma membrane Ca2+-ATPase gene cause deafness in deafwaddler mice. [My Copy] Nat Genet, Vol. 19, No. 4. (August 1998), pp. 390-394. by V. A. Street, J. W. McKee-Johnson, R. C. Fonseca, B. L. Tempel, K. Noben-Trauth posted to hearing phenome by pcahan1 on 2006-11-01 15:33:02 as
	Null mutation in the gene encoding plasma membrane Ca2+-ATPase isoform 2 impairs calcium transport into milk. [My Copy] J Biol Chem, Vol. 279, No. 41. (8 October 2004), pp. 42369-42373. by T. A. Reinhardt, J. D. Lippolis, G. E. Shull, R. L. Horst posted to bw_in bw_out phenome by pcahan1 on 2006-11-01 15:30:52 as
	The Sycp1 loci of the mouse genome: successive retropositions of a meiotic gene during the recent evolution of the genus. [My Copy] Genomics, Vol. 44, No. 1. (15 August 1997), pp. 118-126. by J. Sage, L. Yuan, L. Martin, et al.M. G. Mattei, J. L. Guénet, J. G. Liu, C. Hoög, M. Rassoulzadegan, F. Cuzin posted to cc_index phenome by pcahan1 on 2006-10-31 23:40:05 as
	Germ cell-specific enhancer activity of a repeated element in a variable region of the mouse genome. [My Copy] Gene, Vol. 221, No. 1. (9 October 1998), pp. 85-92. by J. Sage, L. Martin, M. Rassoulzadegan, F. Cuzin posted to cc_index phenome by pcahan1 on 2006-10-31 23:38:25 as
	Loss of cadherin-11 adhesion receptor enhances plastic changes in hippocampal synapses and modifies behavioral responses. [My Copy] Mol Cell Neurosci, Vol. 15, No. 6. (June 2000), pp. 534-546. by T. Manabe, H. Togashi, N. Uchida, et al.S. C. Suzuki, Y. Hayakawa, M. Yamamoto, H. Yoda, T. Miyakawa, M. Takeichi, O. Chisaka posted to cc_index phenome by pcahan1 on 2006-10-31 23:35:19 as
	Graded and areal expression patterns of regulatory genes and cadherins in embryonic neocortex independent of thalamocortical input. [My Copy] J Neurosci, Vol. 19, No. 24. (15 December 1999), pp. 10877-10885. by Y. Nakagawa, J. E. Johnson, D. D. O'Leary posted to cc_index phenome by pcahan1 on 2006-10-31 23:34:29 as along with 1 person cassandragould
	Expression of cadherin-11 delineates boundaries, neuromeres, and nuclei in the developing mouse brain. [My Copy] Dev Dyn, Vol. 206, No. 4. (August 1996), pp. 455-462. by Y. Kimura, H. Matsunami, M. Takeichi posted to cc_index phenome by pcahan1 on 2006-10-31 23:30:34 as
	The transcription factor Pax6 is required for development of the diencephalic dorsal midline secretory radial glia that form the subcommissural organ. [My Copy] Mech Dev, Vol. 109, No. 2. (December 2001), pp. 215-224. by G. Estivill-Torrús, T. Vitalis, P. Fernández-Llebrez, D. J. Price posted to cc_index phenome by pcahan1 on 2006-10-31 23:29:55 as
	Cadherin-11 expressed in association with mesenchymal morphogenesis in the head, somite, and limb bud of early mouse embryos. [My Copy] Dev Biol, Vol. 169, No. 1. (May 1995), pp. 347-358. by Y. Kimura, H. Matsunami, T. Inoue, et al.K. Shimamura, N. Uchida, T. Ueno, T. Miyazaki, M. Takeichi posted to cc_index by pcahan1 on 2006-10-31 23:28:56 as
	Empirical validation of the S-Score algorithm in the analysis of gene expression data. [My Copy] BMC bioinformatics, Vol. 7 (2006) by Richard E. Kennedy, Kellie J. Archer, Michael F. Miles posted to exp by pcahan1 on 2006-09-22 01:08:43 as along with 1 person daforerog
	Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data [My Copy] Nucl. Acids Res., Vol. 33, No. 20. (10 November 2005), pp. e175-e175. by Manhong Dai, Pinglang Wang, Andrew D. Boyd, et al.Georgi Kostov, Brian Athey, Edward G. Jones, William E. Bunney, Richard M. Myers, Terry P. Speed, Huda Akil, Stanley J. Watson, Fan Meng posted to exp by pcahan1 on 2006-09-20 20:30:34 as along with 11 people and 2 groups rmk lwaldron giovenko frohike incovoma nicholso heliopais Montrachet shikin bertelsen waszak Bioinformatics GeneGo
	An integrated view of copy number and allelic alterations in the cancer genome using single nucleotide polymorphism arrays. [My Copy] Cancer Res, Vol. 64, No. 9. (1 May 2004), pp. 3060-3071. by X. Zhao, C. Li, J. G. Paez, et al.K. Chin, P. A. Jänne, T. H. Chen, L. Girard, J. Minna, D. Christiani, C. Leo, J. W. Gray, W. R. Sellers, M. Meyerson posted to hmm_manu by pcahan1 on 2006-09-19 20:45:55 as along with 3 people noushin jfr rdiaz
	Hidden Markov models approach to the analysis of array CGH data [My Copy] Journal of Multivariate Analysis In Special Issue on Multivariate Methods in Genomic Data Analysis, Vol. 90, No. 1. (July 2004), pp. 132-153. by Jane Fridlyand, Antoine M. Snijders, Dan Pinkel, Donna G. Albertson, Jain posted to hmm_manu by pcahan1 on 2006-09-19 20:36:45 as along with 2 people archroad OscarRueda
	Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids [My Copy] (01 July 1999) by Richard Durbin, Sean R. Eddy, Anders Krogh, Graeme Mitchison posted to hmm_manu by pcahan1 on 2006-09-19 20:02:54 as along with 15 people and 1 group adijr esyoun heliopais bicko derek_farn stanley ujh balajis indigoviolet moborg emranmohdtamil dullhunk rabio wenhan xiaobeizhao EisenLab
	Prediction of complete gene structures in human genomic DNA [My Copy] Journal of Molecular Biology, Vol. 268, No. 1. (25 April 1997), pp. 78-94. by C. Burge posted to hmm_manu by pcahan1 on 2006-09-19 20:01:55 as along with 13 people and 2 groups viren4388 rshe jmartin49 Ayest indigoviolet kaspermunch dullhunk dquest wenhan GustavoLacerda nicholso nklee bandrewfox Bioinformatics EisenLab
	Pfam: a comprehensive database of protein domain families based on seed alignments. [My Copy] Proteins, Vol. 28, No. 3. (July 1997), pp. 405-420. by E. L. Sonnhammer, S. R. Eddy, R. Durbin posted to hmm_manu by pcahan1 on 2006-09-19 20:01:37 as along with 7 people and 1 group thegoose2 tharris cjeans antonkratz ca3295 marti gulkur C. elegans / WormBase
	A tutorial on hidden Markov models and selected applications in speech recognition [My Copy] Proceedings of the IEEE In Proceedings of the IEEE, Vol. 77, No. 2. (06 August 2002), pp. 257-286. by L. R. Rabiner posted to hmm_manu by pcahan1 on 2006-09-19 19:55:06 as along with 53 people and 8 groups amoreno bklynbam ianhales pascanur mtecha roys wasteland93 tkollar matjes mthomure hawkes db344 ashleygeorge rodri mhp0814 yonatanf gkoenig muraken robotact albert_swart gulkur sergut ppeeling alexr mdhussein mcastillo daveh neveaire pool007 gonza_bp takahi jford neilc pratap bcroy tkravitz dominikschmidt sancho Alice2Nice zeppe karthik_ravikanti poluxmoon sachina maxp tgyork asterix77 yangxian ulmer julianpan rlichten wenhan huangsong tdahl searchingspeech2010 MiGen Project Autoregulation Biostatistics Computational-Genomics Bioinformatics Neuroscience MAML
	Isolation of a rat liver delta-aminolevulinate dehydrase (ALAD) cDNA clone: evidence for unequal ALAD gene dosage among inbred mouse strains. [My Copy] Proc Natl Acad Sci U S A, Vol. 83, No. 15. (August 1986), pp. 5568-5572. by T. R. Bishop, P. J. Cohen, S. H. Boyer, A. N. Noyes, L. P. Frelin posted to hmm_manu by pcahan1 on 2006-09-18 21:21:25 as
	BioHMM: a heterogeneous hidden Markov model for segmenting array CGH data. [My Copy] Bioinformatics, Vol. 22, No. 9. (1 May 2006), pp. 1144-1146. by J. C. Marioni, N. P. Thorne, S. Tavaré posted to hmm_manu by pcahan1 on 2006-09-18 21:13:52 as along with 3 people rdiaz OscarRueda jackjackjjj
	Integrating copy number polymorphisms into array CGH analysis using a robust HMM. [My Copy] Bioinformatics, Vol. 22, No. 14. (15 July 2006) by S. P. Shah, X. Xuan, R. J. Deleeuw, et al.M. Khojasteh, W. L. Lam, R. Ng, K. P. Murphy posted to hmm_manu by pcahan1 on 2006-09-18 21:12:38 as along with 4 people and 1 group rdiaz OscarRueda jackjackjjj frohike Bioinformatics
	Recent segmental duplications in the human genome. [My Copy] Science, Vol. 297, No. 5583. (9 August 2002), pp. 1003-1007. by J. A. Bailey, Z. Gu, R. A. Clark, et al.K. Reinert, R. V. Samonte, S. Schwartz, M. D. Adams, E. W. Myers, P. W. Li, E. E. Eichler posted to gru segdups by pcahan1 on 2006-09-11 21:40:33 as along with 5 people dakelley APRegier daed balicea bioguru2000
	Large-Scale Copy Number Polymorphism in the Human Genome [My Copy] Science, Vol. 305, No. 5683. (23 July 2004), pp. 525-528. by Jonathan Sebat, B. Lakshmi, Jennifer Troge, et al.Joan Alexander, Janet Young, Par Lundin, Susanne Maner, Hillary Massa, Megan Walker, Maoyen Chi, Nicholas Navin, Robert Lucito, John Healy, James Hicks, Kenny Ye, Andrew Reiner, T. Conrad Gilliam, Barbara Trask, Nick Patterson, Anders Zetterberg, Michael Wigler posted to gru segdups by pcahan1 on 2006-09-11 21:37:38 as along with 11 people and 2 groups stharward psique krokicki waszak mercaptan mrkrause rdiaz jeremymiller massivemayhem jpdemuth Ema Bioinformatics GeschwindLab
	Fine-scale structural variation of the human genome [My Copy] Nature Genetics, Vol. 37, No. 7. (15 May 2005), pp. 727-732. by Eray Tuzun, Andrew J. Sharp, Jeffrey A. Bailey, et al.Rajinder Kaul, Anne V. Morrison, Lisa M. Pertz, Eric Haugen, Hillary Hayden, Donna Albertson, Daniel Pinkel, Maynard V. Olson, Evan E. Eichler posted to gru segdups by pcahan1 on 2006-09-11 21:36:54 as along with 5 people APRegier waszak matthewsuderman bpb Neeperando
	Detection of large-scale variation in the human genome. [My Copy] Nature genetics, Vol. 36, No. 9. (September 2004), pp. 949-951. by A. John Iafrate, Lars Feuk, Miguel N. Rivera, et al.Marc L. Listewnik, Patricia K. Donahoe, Ying Qi, Stephen W. Scherer, Charles Lee posted to gru segdups by pcahan1 on 2006-09-11 17:13:38 as along with 7 people and 2 groups daforerog psique daed dchughes ealloza bioguru2000 Ema G4ID Genetics-of-Gambling
	Genome-wide detection of segmental duplications and potential assembly errors in the human genome sequence. [My Copy] Genome Biol, Vol. 4, No. 4. (2003) by J. Cheung, X. Estivill, R. Khaja, et al.J. R. MacDonald, K. Lau, L. C. Tsui, S. W. Scherer posted to gru segdups by pcahan1 on 2006-09-11 17:00:11 as along with 1 person dakelley
	Segmental duplications and copy-number variation in the human genome. [My Copy] American journal of human genetics, Vol. 77, No. 1. (July 2005), pp. 78-88. by A. J. Sharp, D. P. Locke, S. D. McGrath, et al.Z. Cheng, J. A. Bailey, R. U. Vallente, L. M. Pertz, R. A. Clark, S. Schwartz, R. Segraves, V. V. Oseroff, D. G. Albertson, D. Pinkel, E. E. Eichler posted to gru segdups by pcahan1 on 2006-09-11 16:54:26 as along with 6 people and 4 groups stharward dakelley daed balicea dchughes giovanni Bioinformatics G4ID GeschwindLab Genetics-of-Gambling
	Analysis of segmental duplications and genome assembly in the mouse. [My Copy] Genome Res, Vol. 14, No. 5. (May 2004), pp. 789-801. by J. A. Bailey, D. M. Church, M. Ventura, M. Rocchi, E. E. Eichler posted to cnv gru segdups by pcahan1 on 2006-09-08 14:00:59 as along with 1 person dakelley
	Recent segmental and gene duplications in the mouse genome. [My Copy] Genome Biol, Vol. 4, No. 8. (2003) by J. Cheung, M. D. Wilson, J. Zhang, et al.R. Khaja, J. R. MacDonald, H. H. Heng, B. F. Koop, S. W. Scherer posted to cnv gru segdups by pcahan1 on 2006-09-08 14:00:36 as along with 2 people dakelley miguel
	Enrichment of segmental duplications in regions of breaks of synteny between the human and mouse genomes suggest their involvement in evolutionary rearrangements. [My Copy] Hum Mol Genet, Vol. 12, No. 17. (1 September 2003), pp. 2201-2208. by L. Armengol, M. A. Pujana, J. Cheung, S. W. Scherer, X. Estivill posted to cnv gru segdups by pcahan1 on 2006-09-08 14:00:01 as along with 1 person nuin
	Murine segmental duplications are hot spots for chromosome and gene evolution. [My Copy] Genomics, Vol. 86, No. 6. (December 2005), pp. 692-700. by L. Armengol, T. Marquès-Bonet, J. Cheung, et al.R. Khaja, J. R. González, S. W. Scherer, A. Navarro, X. Estivill posted to cnv gru segdups by pcahan1 on 2006-09-08 13:58:59 as
	Molecular mechanisms for genomic disorders. [My Copy] Annu Rev Genomics Hum Genet, Vol. 3 (2002), pp. 199-242. by K. Inoue, J. R. Lupski posted to cnv gru by pcahan1 on 2006-09-08 13:52:56 as
	Balding hair follicle dermal papilla cells contain higher levels of androgen receptors than those from non-balding scalp. [My Copy] J Endocrinol, Vol. 156, No. 1. (January 1998), pp. 59-65. by N. A. Hibberts, A. E. Howell, V. A. Randall posted to ar bald prop qaz qaz3 by pcahan1 on 2006-08-24 04:48:24 as
	Cultured dermal papilla cells from androgen-dependent human hair follicles (e.g. beard) contain more androgen receptors than those from non-balding areas of scalp. [My Copy] J Endocrinol, Vol. 133, No. 1. (April 1992), pp. 141-147. by V. A. Randall, M. J. Thornton, A. G. Messenger posted to ar bald prop qaz qaz3 by pcahan1 on 2006-08-24 04:46:50 as
	Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. [My Copy] Nature, Vol. 411, No. 6836. (24 May 2001), pp. 494-498. by S. M. Elbashir, J. Harborth, W. Lendeckel, A. Yalcin, K. Weber, T. Tuschl posted to assoc bald prop qaz rnai by pcahan1 on 2006-08-24 03:12:25 as along with 2 people schmidtm zebkhan
	The culture of dermal papilla cells from human hair follicles. [My Copy] Br J Dermatol, Vol. 110, No. 6. (June 1984), pp. 685-689. by A. G. Messenger posted to bald dermal_papilla prop qaz by pcahan1 on 2006-08-24 02:29:39 as
	A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. [My Copy] Bioinformatics (Oxford, England), Vol. 19, No. 2. (22 January 2003), pp. 185-193. by B. M. Bolstad, R. A. Irizarry, M. Astrand, T. P. Speed posted to assoc bald exp methods_cb prop qaz by pcahan1 on 2006-08-24 02:25:04 as along with 22 people jperkins vplagnol brianb neils ipark-kaist shikin michaelbarton emptyhb noushin huiminC cassj Dax42 chad_davis RMGraze gjuggler filmsternchen qmwwallace joepickrell ghattem bertelsen vertikalist GeeSharpMinor
	Summaries of Affymetrix GeneChip probe level data [My Copy] Nucl. Acids Res., Vol. 31, No. 4. (15 February 2003), e15. by Rafael A. Irizarry, Benjamin M. Bolstad, Francois Collin, Leslie M. Cope, Bridget Hobbs, Terence P. Speed posted to bald exp methods_cb prop qaz by pcahan1 on 2006-08-24 02:24:27 as along with 17 people jperkins daforerog lwaldron shikin dswan huiminC RMGraze aviad_work vplagnol ghattem talponer heliopais wirawan waszak rschulz bertelsen srp33

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bald	92
qaz	55
prop	45
assoc	29
follicle	28
phenome	20
yeast	15
hmm_manu	13
gru	12
gene_copy_num	11
segdups	11
mcnv	9
cc_index	7
snp	7
haplotyping	6
baso	5
cnv	5
methods_cb	5
mpch	5
pt	5
ar	4
exp	4
expression	4
qtl-narrowing	4
review	3
bn	2
er	2
expression_genetics	2
hearing	2
methods_g	2
pharmacogenomics	2
qaz3	2
rnai	2
stem	2
systems_bio	2
tag	2
affy	1
apoptosis	1
apoptosis_blocker	1
bw_in	1
bw_out	1
cancer	1
capture	1
cross-species	1
culture	1
data	1
dermal_papilla	1
drugs	1
expression-genetics	1
genetic_alg	1
genetic_variation	1
haplotying	1
hmm	1
hr	1
integration	1
interactome	1
literature_mining	1
mb_methods	1
mouse	1
mouse_haplotype	1
obesity	1
pooling	1
psor	1
qaz2	1
re-analysis	1
recombination	1
smad4	1
software	1
systems_biology	1
vdr	1
zn	1

pcahan1's library 219 articles Export

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