phoenixzxl's specificity [22 articles] Export

Recent papers added to phoenixzxl's library classified by the tag specificity. You can also see everyone's specificity.

	Network-based prediction of human tissue-specific metabolism [My Copy] Nature Biotechnology In Nat Biotech, Vol. 26, No. 9. (17 August 2008), pp. 1003-1010. by Tomer Shlomi, Moran N. Cabili, Markus J. Herrgard, Bernhard O. Palsson, Eytan Ruppin posted to specificity network_inference by phoenixzxl on 2009-11-24 10:26:18 as along with 13 people alhufton grahamc yaredo Sonix jfr roys mdstobbe klo peterli ptrobajo renatomilani zwang guhjy
	Global Prediction of Tissue-Specific Gene Expression and Context-Dependent Gene Networks in <italic>Caenorhabditis elegans</italic> [My Copy] PLoS Comput Biol, Vol. 5, No. 6. (19 June 2009), e1000417. by Maria D. Chikina, Curtis Huttenhower, Coleen T. Murphy, Olga G. Troyanskaya posted to specificity vesicle_transport by phoenixzxl on 2009-07-02 03:59:27 as along with 4 people grahamc biomcgary roys oelemento
	Tissue specificity and the human protein interaction network. [My Copy] Molecular systems biology, Vol. 5 (7 April 2009) by Alice Bossi, Ben Lehner posted to network_dynamic network_ppi specificity by phoenixzxl on 2009-05-04 01:58:36 as along with 13 people jfr dolchan balicea poirel tmmurali diamantis coela frohike Kubke renatomilani TRHvidsten grahamc sjung
	Design of protein-interaction specificity gives selective bZIP-binding peptides [My Copy] Nature, Vol. 458, No. 7240. (16 April 2009), pp. 859-864. by Gevorg Grigoryan, Aaron W. Reinke, Amy E. Keating posted to coiled_coil protein_design specificity structure_aided by phoenixzxl on 2009-04-16 07:43:56 as along with 7 people kgutwin carlk kevinchannon pablocarb twatanab absterga jbhiatt
	Contextual Specificity in Peptide-Mediated Protein Interactions [My Copy] PLoS ONE, Vol. 3, No. 7. (2 July 2008), e2524. by Amelie Stein, Patrick Aloy posted to specificity by phoenixzxl on 2009-01-08 02:56:50 as along with 4 people aceol bpcusack neils zdai
	Characterization of domain-peptide interaction interface: a generic structure-based model to decipher the binding specificity of SH3 domains [My Copy] Mol Cell Proteomics (20 November 2008), M800450-MCP200. by Tingjun Hou, Zheng Xu, Wei Zhang, et al.William A. Mclaughlin, David A. Case, Yang Xu, Wei Wang posted to domain prediction_interface specificity structure_aided by phoenixzxl on 2008-11-25 01:20:19 as along with 2 people kgutwin zwang
	Optimization of specificity in a cellular protein interaction network by negative selection. [My Copy] Nature, Vol. 426, No. 6967. (11 December 2003), pp. 676-680. by A. Zarrinpar, S. H. Park, W. A. Lim posted to evolution specificity by phoenixzxl on 2008-07-31 07:59:32 as along with 4 people and 2 groups barry grahamc cjeans paolomarcatili structural_bioinformatics Bioinformatics
	A Genome-wide Ras-Effector Interaction Network. [My Copy] J Mol Biol (22 May 2007) by Christina Kiel, Mathilde Foglierini, Nico Kuemmerer, Pedro Beltrao, Luis Serrano posted to prediction_ddi specificity by phoenixzxl on 2008-06-28 08:58:28 as along with 1 person cjeans
	A theoretical framework for specificity in cell signaling [My Copy] Molecular Systems Biology, Vol. 1, No. 1. (18 October 2005), pp. msb4100031-E1-msb4100031-E5. by Natalia L. Komarova, Xiufen Zou, Qing Nie, Lee Bardwell posted to specificity by phoenixzxl on 2008-06-24 07:24:12 as along with 1 person and 1 group arne dIEMoSIRIS
	BADASP: predicting functional specificity in protein families using ancestral sequences. [My Copy] Bioinformatics, Vol. 21, No. 22. (15 November 2005), pp. 4190-4191. by R. J. Edwards, D. C. Shields posted to prediction_function specificity by phoenixzxl on 2008-06-24 07:23:42 as along with 1 person dlr
	Mathematical models of specificity in cell signaling. [My Copy] Biophys J, Vol. 92, No. 10. (15 May 2007), pp. 3425-3441. by L. Bardwell, X. Zou, Q. Nie, N. L. Komarova posted to specificity by phoenixzxl on 2008-06-24 07:22:37 as along with 3 people and 1 group jtaylor ibschwartz arne dIEMoSIRIS
	Automated design of specificity in molecular recognition. [My Copy] Nat Struct Biol, Vol. 10, No. 1. (January 2003), pp. 45-52. by J. J. Havranek, P. B. Harbury posted to coiled_coil protein_design specificity by phoenixzxl on 2008-06-24 02:54:54 as along with 2 people kgutwin bethbromley
	Design of multi-specificity in protein interfaces. [My Copy] PLoS computational biology, Vol. 3, No. 8. (1 August 2007), e164. by Elisabeth L. Humphris, Tanja Kortemme posted to prediction_interface specificity synthetic_biology by phoenixzxl on 2008-06-23 11:03:15 as along with 9 people and 3 groups bmduggan allmensch msuarezdiez jwm bicko Einat dpollard Scis0000002 marck structural_bioinformatics Bioinformatics EisenLab
	Specificity and Evolvability in Eukaryotic Protein Interaction Networks [My Copy] PLoS Computational Biology, Vol. 3, No. 2. (1 February 2007), e25. by Pedro Beltrao, Luis Serrano posted to network_evolution network_ppi specificity by phoenixzxl on 2008-06-23 10:57:55 as along with 1 person pedrobeltrao
	Structural specificity in coiled-coil interactions [My Copy] Current Opinion in Structural Biology, Vol. In Press, Corrected Proof by Gevorg Grigoryan, Amy E. Keating posted to coiled_coil specificity by phoenixzxl on 2008-06-17 02:24:31 as along with 7 people and 1 group martainn kgutwin oteri markchen marck zwang viktor21614 LOX-1 Receptor
	ModuleMiner - improved computational detection of cis-regulatory modules: are there different modes of gene regulation in embryonic development and adult tissues? [My Copy] Genome Biology, Vol. 9, No. 4. (2008), R66. by Peter Van Loo, Stein Aerts, Bernard Thienpont, Bart De Moor, Yves Moreau, Peter Marynen posted to specificity by phoenixzxl on 2008-04-08 10:00:09 as along with 6 people mox heliopais brant djkt natstreet maximilianh
	A high efficiency strategy for binding property characterization of peptide-binding domains. [My Copy] Mol Cell Proteomics, Vol. 5, No. 8. (August 2006), pp. 1368-1381. by E. Song, S. Gao, R. Tian, et al.S. Ma, H. Huang, J. Guo, Y. Li, L. Zhang, Y. Gao posted to specificity by phoenixzxl on 2008-03-31 08:38:31 as
	The Origins of Specificity in Polyketide Synthase Protein Interactions [My Copy] PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e186. by Mukund Thattai, Yoram Burak, Boris I. Shraiman posted to specificity by phoenixzxl on 2008-03-31 08:35:01 as along with 2 people zwang marck
	A novel structure-based encoding for machine-learning applied to the inference of SH3 domain specificity. [My Copy] Bioinformatics (Oxford, England), Vol. 22, No. 19. (1 October 2006), pp. 2333-2339. by E. Ferraro, A. Via, G. Ausiello, M. Helmer-Citterich posted to machine_learning prediction_ddi prediction_interface specificity by phoenixzxl on 2008-03-31 03:44:33 as along with 1 person HawkinsJohnC
	Multiple domains in Siz SUMO ligases contribute to substrate selectivity [My Copy] J Cell Sci, Vol. 119, No. 22. (15 November 2006), pp. 4749-4757. by Alison Reindle, Irina Belichenko, Gwendolyn R. Bylebyl, Xiaole L. Chen, Nishant Gandhi, Erica S. Johnson posted to specificity by phoenixzxl on 2008-03-19 01:45:42 as along with 1 person lusk
	Dimerization specificity of all 67 B-ZIP motifs in Arabidopsis thaliana: a comparison to Homo sapiens B-ZIP motifs. [My Copy] Nucleic Acids Res, Vol. 32, No. 11. (2004), pp. 3435-3445. by C. D. Deppmann, A. Acharya, V. Rishi, et al.B. Wobbes, S. Smeekens, E. J. Taparowsky, C. Vinson posted to coiled_coil specificity by phoenixzxl on 2008-03-19 01:42:24 as along with 2 people hplatero gwenknight
	Specificity in protein interactions and its relationship with sequence diversity and coevolution [My Copy] Proceedings of the National Academy of Sciences In Proceedings of the National Academy of Sciences, Vol. 104, No. 19. (8 May 2007), pp. 7999-8004. by Luke Hakes, Simon C. Lovell, Stephen G. Oliver, David L. Robertson posted to co-evolution specificity by phoenixzxl on 2008-03-19 01:33:32 as along with 15 people and 2 groups dfdong mgomes chica diamantis dullhunk marti stevanspringer bjorns cjeans zwang Garamonfok cursonivel1 tale winterschlaefer chrys FAB-lab cursonivel1

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evolution	48
network_ppi	36
review	35
network_analysis	34
insight	29
data_integration	29
prediction_interface	26
disease_drug	26
bayesian	26
simulation	25
machine_learning	23
prediction_ddi	22
prediction_ppi	22
specificity	22
network_dynamic	21
structure_aided	19
influenza	19
intereting	19
network_evolution	18
complex	18
domain	17
structure	16
tutorial	15
infect	15
co-evolution	14
dynamics	14
statistical	13
coiled_coil	13
synthetic_biology	13
prediction_function	13
network_inference	12
soft	12
cns	12
sequence_alignment	11
peruse	11
glycan	11
svm	11
gene_expression	10
r	9
science	9
system_biology	9
data	9
protein_design	8
network_motif	8
probability	8
go	7
ha	6
neurocomputing	6
essay	6
stochastic	6
assembly	5
vesicle_transport	4
tool	3
complex_system	3
snp	3
bayesian_network	3
microarray_data	3
prediction_interaction_more	3
prediction_structure	3
cooperativity	3
optimization	3
random_walks	3
book	2
norovirus	2
genome	1
mcmc	1
em	1

phoenixzxl's specificity [22 articles] Export

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