pmendes's Kell:DB [17 articles] Export Sort

Recent papers posted to pmendes's library by the author Kell:DB. You can also see everyone's Kell:DB.

Hide details

	A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology [My Copy] Nat Biotech, Vol. 26, No. 10. (09 October 2008), pp. 1155-1160. by Markus J. Herrgard, Neil Swainston, Paul Dobson, et al.Warwick B. Dunn, K. Yalcin Arga, Mikko Arvas, Nils Buthgen, Simon Borger, Roeland Costenoble, Matthias Heinemann, Michael Hucka, Nicolas Le Novere, Peter Li, Wolfram Liebermeister, Monica L. Mo, Ana P. Oliveira, Dina Petranovic, Stephen Pettifer, Evangelos Simeonidis, Kieran Smallbone, Irena Spasie, Dieter Weichart, Roger Brent, David S. Broomhead, Hans V. Westerhoff, Betul Kurdar, Merja Penttila, Edda Klipp, Bernhard O. Palsson, Uwe Sauer, Stephen G. Oliver, Pedro Mendes, Jens Nielsen, Douglas B. Kell posted to yeast systems-biology semantics sbml reconstruction modelling metabolism mcisb community_approach by pmendes on 2009-10-14 11:57:02 as along with 23 people and 2 groups dadiamah m_j windman83 jfr raiyar neilswainston irenas JeremyZucker chasmand schwartzjmc pinney pauldobson alaninmcr allysonlister zwang guhjy dbk michaelbarton ptrobajo neils dullhunk pengchy tmmurali MetabolicModeling BergmanLab
	Schemes of flux control in a model of Saccharomyces cerevisiae glycolysis. [My Copy] Eur J Biochem, Vol. 269, No. 16. (August 2002), pp. 3894-3904. by L. Pritchard, D. B. Kell posted to yeast used-gepasi simulation parameter-estimation modelling metabolism glycolysis by pmendes on 2009-10-14 11:54:13 as along with 6 people and 2 groups schwartzjmc peterli michaelbarton dbk LeightonP dullhunk streptomyces dbk-lab
	The Systems Biology Graphical Notation [My Copy] Nature Biotechnology, Vol. 27, No. 8. (07 August 2009), pp. 735-741. by Nicolas L. Novere, Michael Hucka, Huaiyu Mi, et al.Stuart Moodie, Falk Schreiber, Anatoly Sorokin, Emek Demir, Katja Wegner, Mirit I. Aladjem, Sarala M. Wimalaratne, Frank T. Bergman, Ralph Gauges, Peter Ghazal, Hideya Kawaji, Lu Li, Yukiko Matsuoka, Alice Villeger, Sarah E. Boyd, Laurence Calzone, Melanie Courtot, Ugur Dogrusoz, Tom C. Freeman, Akira Funahashi, Samik Ghosh, Akiya Jouraku, Sohyoung Kim, Fedor Kolpakov, Augustin Luna, Sven Sahle, Esther Schmidt, Steven Watterson, Guanming Wu, Igor Goryanin, Douglas B. Kell, Chris Sander, Herbert Sauro, Jacky L. Snoep, Kurt Kohn, Hiroaki Kitano posted to visualization systems-biology standards software signalling networks modelling metabolism gene-networks by pmendes on 2009-08-19 17:25:13 as along with 42 people and 3 groups agomez heliopais kshameer nuin singhsh greg tonamswish pablocarb josepe abc623 daforerog abhishek_tiwari robertrentzsch ngehlenborg pekrau thegoose bertelsen fgibson Borelli thomaskelder dullhunk polivares chasmand brianb roys torfinnnome guhjy Zephyrus lenov reyez allysonlister apocapoc renatomilani VGreiff druvus sjcockell jandot megraw leliavski frohike fpattyn jhyang Orengo Group Journal Picks Journal picks Neuroblastoma
	Iron behaving badly: inappropriate iron chelation as a major contributor to the aetiology of vascular and other progressive inflammatory and degenerative diseases [My Copy] BMC Medical Genomics, Vol. 2, No. 1. (2009), 2. by Douglas B. Kell posted to review iron by pmendes on 2009-08-17 22:12:25 as along with 5 people and 6 groups gemmalholliday dbk cchand dullhunk HEIRS dbk-lab HEIRS Oxidative Stress HEIRS Immunology and Autoimmune Diseases HEIRS Heavy Metal Toxicity HEIRS - Environmental Illness Research HEIRS Cellular Biology
	Progress being made on standards for use in data sharing [My Copy] Nature, Vol. 456, No. 7218. (05 November 2008), pp. 29-29. by Douglas B. Kell posted to sbml standards systems-biology by pmendes on 2009-05-07 10:54:22 as along with 3 people applebyb druvus dullhunk
	Automated manipulation of systems biology models using libSBML within Taverna workflows. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 2. (15 January 2008), pp. 287-289. by Peter Li, Tom Oinn, Stian Soiland, Douglas B. Kell posted to workflows web-services systems-biology sbml mcisb bioinformatics by pmendes on 2009-04-14 16:18:42 as along with 11 people and 1 group pekrau leemond31 Scis0000002 druvus guhjy chad_davis dullhunk fisherp bootsy dbk alanrw dbk-lab
	Something from nothing -- bridging the gap between constraint-based and kinetic modelling [My Copy] FEBS Journal, Vol. 274, No. 21. (November 2007), pp. 5576-5585. by Kieran Smallbone, Evangelos Simeonidis, David S. Broomhead, Douglas B. Kell posted to kinetics metabolism modelling by pmendes on 2008-06-26 14:17:15 as along with 5 people and 1 group abhishek_tiwari dadiamah schwartzjmc dbk peterli dbk-lab
	Proximate parameter tuning for biochemical networks with uncertain kinetic parameters [My Copy] Molecular BioSystems, Vol. 4, No. 1. (2008), pp. 74-97. by Stephen J. Wilkinson, Neil Benson, Douglas B. Kell posted to parameter-estimation used-copasi by pmendes on 2008-03-25 11:24:33 as
	Text mining and its potential applications in systems biology. [My Copy] Trends Biotechnol (11 October 2006) by Sophia Ananiadou, Douglas B B. Kell, Jun-Ichi I. Tsujii posted to systems-biology text-mining by pmendes on 2008-03-04 10:28:35 as along with 17 people and 3 groups artaban421 eesruiz liblab henk-cul guhjy irenas jfr yas dullhunk fisherp jacky957 daniel_schober dejori pablomendes TheresaNiederberger alanrw satre ImagCom - Biomedical Text Computing dbk-lab T_lab
	Channelling can decrease pool size. [My Copy] Eur J Biochem, Vol. 204, No. 1. (15 February 1992), pp. 257-266. by P. Mendes, D. B. Kell, H. V. Westerhoff posted to mendes metabolic-channelling metabolism modelling simulation used-gepasi by pmendes on 2008-02-29 17:44:37 as along with 1 person and 2 groups dbk streptomyces dbk-lab
	On the role of enzyme kinetic parameters in determining the effectiveness with which channelling can decrease the size of a metabolite pool. [My Copy] Acta Biotheor, Vol. 41, No. 1-2. (June 1993), pp. 63-73. by P. Mendes, D. B. Kell posted to mendes metabolic-channelling metabolism modelling simulation used-gepasi by pmendes on 2008-02-29 17:43:05 as along with 1 person and 2 groups dbk streptomyces dbk-lab
	A series of cases in which metabolic channelling can decrease the pool size at constant net flux in a simple dynamic channel. [My Copy] Biochem Soc Trans, Vol. 23, No. 2. (May 1995) by P. Mendes, D. B. Kell, H. V. Westerhoff posted to mendes metabolic-channelling metabolism modelling simulation by pmendes on 2008-02-29 17:42:34 as along with 1 person and 2 groups dbk streptomyces dbk-lab
	On the analysis of the inverse problem of metabolic pathways using artificial neural networks. [My Copy] Biosystems, Vol. 38, No. 1. (1996), pp. 15-28. by P. Mendes, D. B. Kell posted to kinetics mendes modelling neural-networks reverse-engineering simulation used-gepasi by pmendes on 2008-02-29 17:41:33 as along with 1 person and 2 groups dbk streptomyces dbk-lab
	Why and when channelling can decrease pool size at constant net flux in a simple dynamic channel. [My Copy] Biochim Biophys Acta, Vol. 1289, No. 2. (15 March 1996), pp. 175-186. by P. Mendes, D. B. Kell, H. V. Westerhoff posted to mendes metabolic-channelling metabolism modelling simulation used-gepasi by pmendes on 2008-02-29 17:40:42 as along with 1 person and 2 groups dbk streptomyces dbk-lab
	MEG (Model Extender for Gepasi): a program for the modelling of complex, heterogeneous, cellular systems. [My Copy] Bioinformatics, Vol. 17, No. 3. (March 2001), pp. 288-289. by P. Mendes, D. B. Kell posted to gepasi mendes modelling simulation by pmendes on 2008-02-29 17:34:11 as along with 3 people and 2 groups camster dbk LeightonP streptomyces dbk-lab
	A proposed framework for the description of plant metabolomics experiments and their results [My Copy] Nature Biotechnology, Vol. 22, No. 12. (06 December 2004), 1601. by Helen Jenkins, Nigel Hardy, Manfred Beckmann, et al.John Draper, Aileen R. Smith, Janet Taylor, Oliver Fiehn, Royston Goodacre, Raoul J. Bino, Robert Hall, Joachim Kopka, Geoffrey A. Lane, B. Markus Lange, Jang R. Liu, Pedro Mendes, Basil J. Nikolau, Stephen G. Oliver, Norman W. Paton, Sue Rhee, Ute Roessner-Tunali, Kazuki Saito, Jørn Smedsgaard, Lloyd W. Sumner, Trevor Wang, Sean Walsh, Eve S. Wurtele, Douglas B. Kell posted to mendes metabolomics standards by pmendes on 2008-02-29 17:11:24 as along with 9 people and 2 groups dbk irenas betainverse LeightonP andytseng agileproteomics BIBLIOma dullhunk katerinakal streptomyces dbk-lab
	The markup is the model: Reasoning about systems biology models in the Semantic Web era [My Copy] Journal of Theoretical Biology, Vol. 252, No. 3. (07 June 2008), pp. 538-543. by Douglas B. Kell, Pedro Mendes posted to semantics mendes mcisb heinrich by pmendes on 2008-02-29 16:43:01 as along with 5 people dagmar guhjy dullhunk fisherp alanrw

Note: You may cite this page as: http://www.citeulike.org/user/pmendes/author/Kell:DB

Sort by:
Order:	Default Ascending Descending
Empty fields:	Default First Last

modelling	62
simulation	45
mendes	41
metabolism	40
kinetics	30
systems-biology	23
gene-networks	17
theory	16
parameter-estimation	15
review	13
used-copasi	13
metabolomics	13
mca	12
transcriptomics	12
software	12
optimization	11
yeast	10
algorithm	10
bioinformatics	9
standards	9
reverse-engineering	9
stochastic	8
used-gepasi	8
visualization	7
metabolic-channelling	7
sbml	7
enzyme-kinetics	7
networks	6
database	5
signalling	4
gepasi	4
boolean	4
computer-archeology	4
network-structure	4
protein-protein	3
gene-expression-metabolism	3
mcisb	3
copasi	3
semantics	3
proteomics	3
oscillations	3
medicago	3
glycolysis	3
workflows	2
text-mining	2
cooperativity	2
reconstruction	2
particle-swarm	2
pentose-phosphate-pathway	2
elementary-modes	2
web-services	2
machine-learning	2
nonlinear-dynamics	2
crowding	2
heinrich	2
metabolic-engineering	2
progress-curves	2
data-mining	1
component-based	1
numerical-analysis	1
lsoda	1
msi	1
data-integration	1
transcription	1
hill	1
ascorbate	1
comparison	1
neural-networks	1
modularity	1
editorial	1
scale-free	1
noise	1
fba	1
hemaglobin	1
iron	1
community_approach	1
yap	1
is-in-biomodels	1
petri-nets	1
partial-correlation	1
evolution-strategy	1
bst	1
erythrocyte	1
software-development	1
meeting-report	1
glx	1
project-management	1
immunology	1
discrete	1
circadian-clock	1
book	1
ontology	1
inhibition	1
clustering	1
extreme-pathways	1
correlation	1
evolutionary-algorithm	1
multi-scale	1
human	1
gene-expression	1

pmendes's Kell:DB [17 articles] Export Sort

pmendes's tags