pradiptaray's library 131 articles Export

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	ChIP\|[ndash]\|seq: advantages and challenges of a maturing technology [My Copy] Nature Reviews Genetics, Vol. 10, No. 10. (08 September 2009), pp. 669-680. by Peter J. Park posted to chip-seq by pradiptaray on 2009-10-02 18:49:14 as along with 22 people and 6 groups dchughes RyuOgawa heliopais giovenko inesdesantiago dakelley clearbluespring akundaje rdiaz kimorley leliavski humburg reyez qayub fenghezi tonamswish robertrentzsch polivares idonaldson rschulz cvaldes danmaclean Journal picks Orengo Group Journal Picks JLab BergmanLab CTCF Chromatin
	ChIP-seq: welcome to the new frontier [My Copy] Nat Meth, Vol. 4, No. 8. (01 August 2007), pp. 613-614. by Elaine R. Mardis posted to chip-seq by pradiptaray on 2009-10-02 16:14:47 as along with 5 people ewilban1 giovenko zhlei sleepingcell slevy03
	Local DNA Topography Correlates with Functional Noncoding Regions of the Human Genome [My Copy] Science, Vol. 324, No. 5925. (17 April 2009), pp. 389-392. by Stephen C. J. Parker, Loren Hansen, Hatice O. Abaan, Thomas D. Tullius, Elliott H. Margulies posted to topography tfbs structure motif evolution enhancer by pradiptaray on 2009-09-30 21:55:16 as along with 38 people and 6 groups daveGerrard operon sujaikumar antonkratz roys gjuggler benjaminsb gdb hagechouchin443 tomtullius scjparker psique orzenil emptyhb ilyashl coela VGreiff APRegier myzhang pkonings akundaje athma absterga rpatward timflutre stajich bpcusack jbhiatt djkt dhlbh friendpine dpollard inesdesantiago JustinCrocker aprasad maximilianh idonaldson kshundyak BergmanLab Mycology structural_bioinformatics RockmanLab EisenLab cis-regulatory-evolution
	Divergence of Transcription Factor Binding Sites Across Related Yeast Species [My Copy] Science, Vol. 317, No. 5839. (10 August 2007), pp. 815-819. by Anthony R. Borneman, Tara A. Gianoulis, Zhengdong D. Zhang, et al.Haiyuan Yu, Joel Rozowsky, Michael R. Seringhaus, Lu Y. Wang, Mark Gerstein, Michael Snyder posted to yeast tfbs motif evolution duplication divergence by pradiptaray on 2009-09-30 21:53:18 as along with 22 people and 2 groups gdb fenghezi dbensasson caseybrown bryankr aalibes chad_davis dpollard djkt mikaelhuss lusk cjeans sujaikumar zwang GustavoLacerda Jporci maximilianh cisevol njcitulike emptyhb nklee anka EisenLab cis-regulatory-evolution
	Functional Architecture and Evolution of Transcriptional Elements That Drive Gene Coexpression [My Copy] Science, Vol. 317, No. 5844. (14 September 2007), pp. 1557-1560. by Christopher D. Brown, David S. Johnson, Arend Sidow posted to tfbs motif evolution crm architecture by pradiptaray on 2009-09-30 21:52:13 as along with 10 people and 2 groups dpollard djkt joepickrell zwang Garamonfok Stew mimulus_99 maximilianh cisevol emptyhb EisenLab cis-regulatory-evolution
	M are better than one: an ensemble-based motif finder and its application to regulatory element prediction [My Copy] Bioinformatics, Vol. 25, No. 7. (1 April 2009), pp. 868-874. by Chen Yanover, Mona Singh, Elena Zaslavsky posted to tfbs motif ensemble by pradiptaray on 2009-09-30 21:33:50 as along with 5 people TRHvidsten djkt druvus mhamada maximilianh
	MotifCut: regulatory motifs finding with maximum density subgraphs [My Copy] Bioinformatics, Vol. 22, No. 14. (15 July 2006), pp. e150-157. by Eugene Fratkin, Brian T. Naughton, Douglas L. Brutlag, Serafim Batzoglou posted to tfbs motif clustering by pradiptaray on 2009-09-30 21:31:20 as along with 3 people and 1 group wowalz indigoviolet yevishere EisenLab
	Binding Site Graphs: A New Graph Theoretical Framework for Prediction of Transcription Factor Binding Sites [My Copy] PLoS Comput Biol, Vol. 3, No. 5. (11 May 2007), e90. by Timothy E. Reddy, Charles DeLisi, Boris E. Shakhnovich posted to tfbs motif genomics clustering by pradiptaray on 2009-09-30 21:22:10 as along with 7 people and 1 group nklee aalibes dpollard medic0747 GustavoLacerda mircea marti EisenLab
	MAVID: Constrained Ancestral Alignment of Multiple Sequences [My Copy] Genome Research, Vol. 14, No. 4. (1 April 2004), pp. 693-699. by Nicolas Bray, Lior Pachter posted to alignment constrained msa pachtor by pradiptaray on 2009-05-23 05:28:12 as along with 5 people nuin treangen operon jmeppley Neeperando
	Phylogeny based discovery of regulatory elements. [My Copy] BMC Bioinformatics, Vol. 7 (2006) by J. Gertz, J. C. Fay, B. A. Cohen posted to crm footprinting hky85 motif phylogeny pwm regulation tfbs by pradiptaray on 2009-05-23 05:26:04 as along with 4 people and 2 groups druvus indigoviolet dquest cisevol EisenLab cis-regulatory-evolution
	Functional Analysis of Gene Duplications in Saccharomyces cerevisiae [My Copy] Genetics, Vol. 175, No. 2. (1 February 2007), pp. 933-943. by Yuanfang Guan, Maitreya J. Dunham, Olga G. Troyanskaya posted to crm duplication motif regulation tfbs yeast by pradiptaray on 2009-05-23 05:23:56 as along with 4 people and 1 group TaqSys csaveanu carlk cisevol cis-regulatory-evolution
	Evolution of Transcription Factor Binding Sites in Mammalian Gene Regulatory Regions: Conservation and Turnover [My Copy] Mol Biol Evol, Vol. 19, No. 7. (1 July 2002), pp. 1114-1121. by Emmanouil T. Dermitzakis, Andrew G. Clark posted to evolution mammal motif tfbs turnover by pradiptaray on 2009-03-25 15:33:34 as along with 6 people and 2 groups fenghezi provero adepace cisevol emptyhb xili03 EisenLab cis-regulatory-evolution
	Comparative analyses of multi-species sequences from targeted genomic regions [My Copy] Nature, Vol. 424, No. 6950. (14 August 2003), pp. 788-793. by J. W. Thomas, J. W. Touchman, R. W. Blakesley, et al.G. G. Bouffard, S. M. Beckstrom-Sternberg, E. H. Margulies, M. Blanchette, A. C. Siepel, P. J. Thomas, J. C. Mcdowell, B. Maskeri, N. F. Hansen, M. S. Schwartz, R. J. Weber, W. J. Kent, D. Karolchik, T. C. Bruen, R. Bevan, D. J. Cutler, S. Schwartz, L. Elnitski, J. R. Idol, A. B. Prasad, S. Q. Lee-Lin, V. V. B. Maduro, T. J. Summers, M. E. Portnoy, N. L. Dietrich, N. Akhter, K. Ayele, B. Benjamin, K. Cariaga, C. P. Brinkley, S. Y. Brooks, S. Granite, X. Guan, J. Gupta, P. Haghighi, S. L. Ho, M. C. Huang, E. Karlins, P. L. Laric, R. Legaspi, M. J. Lim, Q. L. Maduro, C. A. Masiello, S. D. Mastrian, J. C. Mccloskey, R. Pearson, S. Stantripop, E. E. Tiongson, J. T. Tran, C. Tsurgeon, J. L. Vogt, M. A. Walker, K. D. Wetherby, L. S. Wiggins, A. C. Young, L. H. Zhang, K. Osoegawa, B. Zhu, B. Zhao, C. L. Shu, P. J. De Jong, C. E. Lawrence, A. F. Smit, A. Chakravarti, D. Haussler, P. Green, W. Miller, E. D. Green posted to comparative empirical evolution selection species by pradiptaray on 2009-03-25 15:18:07 as along with 5 people and 1 group stharward aprasad radek adepace AaronDarling EisenLab
	Comparative Genomics and Adaptive Selection of the ATP-Binding Cassette (ABC) Transporter Family in Caenorhabditis Species. [My Copy] Genetics (28 December 2006) by Zhongying Zhao, James H H. Thomas, Nansheng Chen, Jonathan A A. Sheps, David L L. Baillie posted to evolution selection by pradiptaray on 2008-10-28 15:13:07 as along with 3 people and 1 group thegoose2 tharris zhlei C. elegans / WormBase
	Frequent Gain and Loss of Functional Transcription Factor Binding Sites [My Copy] PLoS Computational Biology, Vol. 3, No. 5. (1 May 2007), e99. by Scott W. Doniger, Justin C. Fay posted to evolution motif by pradiptaray on 2008-10-28 15:11:50 as along with 11 people and 2 groups fenghezi lusk JustinCrocker brant dpollard sebastien_vigneau zwang maximilianh cisevol xili03 emptyhb EisenLab cis-regulatory-evolution
	A Maximum Likelihood Method for Detecting Directional Evolution in Protein Sequences and its Application to Influenza A Virus. [My Copy] Molecular biology and evolution (29 May 2008) by Sergei L L. Kosakovsky Pond, Art F Y F. Poon, Andrew J J. Leigh Brown, Simon D W D. Frost posted to evolution selection by pradiptaray on 2008-10-28 15:10:34 as along with 3 people and 1 group stajich zwang phoenixzxl Mycology
	Evolution of Function in the "Two Dinucleotide Binding Domains" Flavoproteins [My Copy] PLoS Comput Biol, Vol. 3, No. 7. (20 July 2007), e121. by Sunil Ojha, Elaine C. Meng, Patricia C. Babbitt posted to evolution function by pradiptaray on 2008-10-28 15:09:23 as along with 5 people and 2 groups anuragsethi barry Einat zwang mdimon structural_bioinformatics Bioinformatics
	Life-history traits drive the evolutionary rates of mammalian coding and noncoding genomic elements [My Copy] Proceedings of the National Academy of Sciences (11 December 2007), 0705658104. by Sergey I. Nikolaev, Juan I. Montoya-Burgos, Konstantin Popadin, et al.Leila Parand, Elliott H. Margulies, National, Stylianos E. Antonarakis posted to evolution by pradiptaray on 2008-10-28 15:08:25 as along with 5 people and 1 group djkt cjeans zwang cisevol aprasad cis-regulatory-evolution
	Epistasis between deleterious mutations and the evolution of recombination [My Copy] Trends in Ecology & Evolution, Vol. In Press, Corrected Proof by Roger D. Kouyos, Olin K. Silander, Sebastian Bonhoeffer posted to evolution recombination by pradiptaray on 2008-10-28 15:07:26 as along with 3 people and 2 groups dchughes zwang xingxu G4ID Genetics-of-Gambling
	Lifespan Regulation by Evolutionarily Conserved Genes Essential for Viability. [My Copy] PLoS Genet, Vol. 3, No. 4. (6 April 2007) by Sean P P. Curran, Gary Ruvkun posted to evolution by pradiptaray on 2008-10-28 15:04:15 as along with 5 people and 2 groups thegoose2 Zephyrus tharris johncumbers zwang R.E.A.D C. elegans / WormBase
	Probabilistic Phylogenetic Inference with Insertions and Deletions [My Copy] PLoS Comput Biol, Vol. 4, No. 9. (2008), e1000172. by Elena Rivas, Sean R. Eddy posted to evolution phylogenetics by pradiptaray on 2008-10-28 15:02:32 as along with 11 people and 1 group BioNica mhamada treangen zwang nuin timflutre druvus djkt aprasad gjuggler emptyhb iSEEM
	Evolution of genes and genomes on the Drosophila phylogeny [My Copy] Nature, Vol. 450, No. 7167. (08 November 2007), pp. 203-218. posted to drosophila evolution gene by pradiptaray on 2008-10-28 15:01:33 as along with 35 people and 5 groups nuttpo daveGerrard Anachff GustavoLacerda mqbphcw3 rpetrenko gwallau chica jlncdr aprasad gjuggler lizbiogen jbsaltz druvus pengchy operon tmmurali indigoviolet djkt timflutre stajich zwang Garamonfok lp2 CharlesM hpaces caseybrown emptyhb urgi noor PetrovLab isimpson balicea cisevol hdopazo Bioinformatics EisenLab Mycology BergmanLab Drosophila-Genetics-Genomics-2008
	Understanding the limits to generalizability of experimental evolutionary models [My Copy] Nature, Vol. 455, No. 7210. (2008), pp. 220-223. by Samantha E. Forde, Robert E. Beardmore, Ivana Gudelj, Sinan S. Arkin, John N. Thompson, Laurence D. Hurst posted to evolution by pradiptaray on 2008-10-28 15:01:01 as along with 10 people and 1 group qwermish jasonn DanHodson druvus Zephyrus Ema zwang Katje skoddet tmmurali Roswell Cancer Crosstalk
	Molecular basis for evolving modularity in the yeast protein interaction network. [My Copy] PLoS computational biology, Vol. 3, No. 11. (1 November 2007), e226. by Ariel Fernández posted to evolution network by pradiptaray on 2008-10-28 15:00:05 as along with 6 people saket tomhebbron zwang niallhaslam Ema phoenixzxl
	Positive Selection in the Human Genome: From Genome Scans to Biological Significance [My Copy] Annual Review of Genomics and Human Genetics, Vol. 9, No. 1. (2008), pp. 143-160. by Joanna L. Kelley, Willie J. Swanson posted to evolution selection by pradiptaray on 2008-10-28 14:59:24 as along with 4 people ilyashl diamantis gjuggler zwang
	Phylogeny-Aware Gap Placement Prevents Errors in Sequence Alignment and Evolutionary Analysis [My Copy] Science, Vol. 320, No. 5883. (20 June 2008), pp. 1632-1635. by Ari Loytynoja, Nick Goldman posted to phylogeny by pradiptaray on 2008-10-28 14:58:20 as along with 28 people and 3 groups operon TRHvidsten BioNica cmzmasek timflutre alexeid marti bpcusack hpaces dinnes gjuggler djkt ArtemPankin phoenixzxl jago marck imtechnology aprasad zwang bmaust bpb michaelbarton Schmidtc AbnerCYH gulsacan emptyhb jlgreen nuin Khavkin's lab iSEEM Green Lab
	The evolutionary dynamics of the Saccharomyces cerevisiae protein interaction network after duplication [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 3. (22 January 2008), pp. 950-954. by Aviva Presser, Michael B. Elowitz, Manolis Kellis, Roy Kishony posted to duplication evolution network by pradiptaray on 2008-10-28 14:57:26 as along with 10 people carlk ellarond saket leemond31 robfsouza loukialili cjeans zwang roys phoenixzxl
	Phylogenetic analysis of condensation domains in NRPS sheds light on their functional evolution [My Copy] BMC Evolutionary Biology, Vol. 7 (16 May 2007), 78. by Chrstian Rausch, Ilka Hoof, Tilmann Weber, Wolfgang Wohlleben, Daniel H. Huson posted to domain evolution protein by pradiptaray on 2008-10-28 14:56:58 as along with 1 person zwang
	A cis-acting regulatory mutation causes premature hair graying and susceptibility to melanoma in the horse [My Copy] Nat Genet, Vol. 40, No. 8. (2008), pp. 1004-1009. by Rosengren, Anna Golovko, Elisabeth Sundstrom, et al.Ino Curik, Johan Lennartsson, Monika H. Seltenhammer, Thomas Druml, Matthew Binns, Carolyn Fitzsimmons, Gabriella Lindgren, Kaj Sandberg, Roswitha Baumung, Monika Vetterlein, Sara Stromberg, Manfred Grabherr, Claire Wade, Kerstin Lindblad-Toh, Fredrik Ponten, Carl-Henrik Heldin, Johann Solkner, Leif Andersson posted to crm by pradiptaray on 2008-10-01 17:22:38 as along with 1 person oelemento
	Selective Constraints in Experimentally Defined Primate Regulatory Regions [My Copy] PLoS Genet, Vol. 4, No. 8. (2008), e1000157. by Daniel J. Gaffney, Ran Blekhman, Jacek Majewski posted to crm evolution primate selection by pradiptaray on 2008-08-15 21:51:51 as along with 10 people and 2 groups daveGerrard xianjun madreach alhufton djkt bpcusack aprasad caseybrown maximilianh cisevol BergmanLab cis-regulatory-evolution
	Evolutionary analysis of the cis-regulatory region of the spicule matrix gene SM50 in strongylocentrotid sea urchins. [My Copy] Developmental biology, Vol. 315, No. 2. (15 March 2008), pp. 567-578. by J. Walters, E. Binkley, R. Haygood, L. A. Romano posted to crm evolution motif purpuratus regulation sea sm50 tfbs urchin by pradiptaray on 2008-08-07 16:38:42 as along with 1 person emptyhb
	Evolutionary analysis of the well characterized endo16 promoter reveals substantial variation within functional sites — PNAS [My Copy] PNAS, Vol. 102, No. 24. (June 2005), pp. 8591-8596. by J. P. Balhoff, Gregory A. Wray posted to crm endo16 evolution motif purpuratus sea tfbs urchin by pradiptaray on 2008-08-07 16:36:47 as
	Conservation of Endo16 expression in sea urchins despite evolutionary divergence in both cis and trans-acting components of transcriptional regulation. [My Copy] Development, Vol. 130, No. 17. (September 2003), pp. 4187-4199. by L. A. Romano, G. A. Wray posted to crm endo16 purpuratus regulation sea urchin by pradiptaray on 2008-08-07 16:34:02 as along with 2 people and 1 group maximilianh adepace EisenLab
	Quantitative functional interrelations within the cis-regulatory system of the S. purpuratus Endo16 gene [My Copy] Development, Vol. 122, No. 12. (1 December 1996), pp. 4045-4056. by C. H. Yuh, J. G. Moore, E. H. Davidson posted to crm endo16 interrelation purpuratus quantitative sea urchin by pradiptaray on 2008-08-07 16:28:13 as
	Discovery of novel transcription factor binding sites by statistical overrepresentation. [My Copy] Nucleic Acids Res, Vol. 30, No. 24. (15 December 2002), pp. 5549-5560. by S. Sinha, M. Tompa posted to motif overrepresentation regulation tfbs by pradiptaray on 2008-08-07 16:24:03 as along with 11 people wowalz GustavoLacerda kaarsinogen dquest xiaobeizhao smiddha GeeSharpMinor xi03 xili03 ep161302 wenhan
	Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes. [My Copy] Nucleic Acids Res, Vol. 29, No. 3. (1 February 2001), pp. 774-782. by L. McCue, W. Thompson, C. Carmack, et al.M. P. Ryan, J. S. Liu, V. Derbyshire, C. E. Lawrence posted to bacteria footprinting motif phylogeny prokaryote regulation tfbs by pradiptaray on 2008-08-07 16:23:07 as along with 4 people and 1 group azazello dquest adepace nklee EisenLab
	Transcriptional Control in the Segmentation Gene Network of Drosophila [My Copy] PLoS Biol, Vol. 2, No. 9. (31 August 2004), e271. by Mark D. Schroeder, Michael Pearce, John Fak, et al.HongQing Fan, Ulrich Unnerstall, Eldon Emberly, Nikolaus Rajewsky, Eric D. Siggia, Ulrike Gaul posted to drosophila gene_network motif network regulation by pradiptaray on 2008-08-07 16:19:52 as along with 8 people and 5 groups daveGerrard indigoviolet dpollard adepace wrowell emptyhb dlmace balicea BergmanLab TranscriptionalRegulationWithThermodynamicModels EisenLab Cline_lab UH - Computational Biology
	Population genetic and phylogenetic evidence for positive selection on regulatory mutations at the factor VII locus in humans. [My Copy] Genetics, Vol. 167, No. 2. (June 2004), pp. 867-877. by M. W. Hahn, M. V. Rockman, N. Soranzo, D. B. Goldstein, G. A. Wray posted to evolution genetics human population regulation selection species by pradiptaray on 2008-08-07 16:17:06 as along with 3 people and 1 group provero cisevol balicea cis-regulatory-evolution
	A survey of DNA motif finding algorithms. [My Copy] BMC bioinformatics, Vol. 8 Suppl 7, No. Suppl 7. (2007) by Modan K. Das, Ho-Kwok K. Dai posted to motif regulation search survey by pradiptaray on 2008-08-07 16:14:30 as along with 17 people and 2 groups Dulce lusk wowalz svenrahmann isimpson daveGerrard coldmeadow druvus Stew emptyhb dquest nklee maximilianh yevishere csdhwang brant xili03 BergmanLab Bioinformatics - CRUK
	DNA Familial Binding Profiles Made Easy: Comparison of Various Motif Alignment and Clustering Strategies [My Copy] PLoS Computational Biology, Vol. 3, No. 3. (1 March 2007), e61. by Shaun Mahony, Philip E. Auron, Panayiotis V. Benos posted to evolution motif pwm regulation specificity by pradiptaray on 2008-08-07 16:12:34 as along with 4 people aalibes zwang nklee heliopais
	Molecular coevolution within a Drosophila clock gene. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 95, No. 8. (14 April 1998), pp. 4475-4480. by A. A. Peixoto, J. M. Hennessy, I. Townson, et al.G. Hasan, M. Rosbash, R. Costa, C. P. Kyriacou posted to coding coevolution drosophila genetics region by pradiptaray on 2008-08-07 16:07:30 as
	Origins of the Coalescent: 1974-1982 [My Copy] Genetics, Vol. 156, No. 4. (1 December 2000), pp. 1461-1463. by J. F. C. Kingman posted to coalescent genetics phylogeny by pradiptaray on 2008-08-06 16:22:39 as along with 2 people ilyashl timflutre
	Inferring the Demographic History and Rate of Adaptive Substitution in Drosophila [My Copy] PLoS Genetics, Vol. 2, No. 10. (1 October 2006), e166. by Haipeng Li, Wolfgang Stephan posted to drosophila evolution phylogeography selection by pradiptaray on 2008-07-16 18:03:20 as along with 1 person jri
	Gene Duplication and Adaptive Evolution of Digestive Proteases in Drosophila arizonae Female Reproductive Tracts [My Copy] PLoS Genet, Vol. 3, No. 8. (2007), e148. by Erin S. Kelleher, Willie J. Swanson, Therese A. Markow posted to arizonae drosophila duplication evolution selection by pradiptaray on 2008-07-16 16:55:47 as
	Rampant Adaptive Evolution in Regions of Proteins with Unknown Function in Drosophila simulans. [My Copy] PLoS ONE, Vol. 2, No. 10. (2007) by A. K. Holloway, D. J. Begun posted to drosophila evolution selection simulans snp by pradiptaray on 2008-07-16 16:51:39 as along with 1 person and 1 group stajich EisenLab
	Phylogenetic detection of recombination with a Bayesian prior on the distance between trees. [My Copy] PloS one, Vol. 3, No. 7. (July 2008), e2651. by Leonardo de Oliveira d. e. . O. Martins, Elcio Leal, Hirohisa Kishino posted to bayesian phylogeny recombination by pradiptaray on 2008-07-10 05:43:30 as along with 2 people nnnagara leomrtns
	Resurrection of DNA Function <italic>In Vivo</italic> from an Extinct Genome [My Copy] PLoS ONE, Vol. 3, No. 5. (21 May 2008), e2240. by Andrew J. Pask, Richard R. Behringer, Marilyn B. Renfree posted to extinct pcr regulation by pradiptaray on 2008-07-08 21:23:26 as along with 3 people and 1 group vikramjind Scis0000002 cisevol cis-regulatory-evolution
	Structural Extremes in a Cretaceous Dinosaur [My Copy] PLoS ONE, Vol. 2, No. 11. (21 November 2007), e1230. by Paul C. Sereno, Jeffrey A. Wilson, Lawrence M. Witmer, et al.John A. Whitlock, Abdoulaye Maga, Oumarou Ide, Timothy A. Rowe posted to character cladistics dinosaur phylogeny by pradiptaray on 2008-07-08 21:18:33 as
	Development and application of a phylogenomic toolkit: Resolving the evolutionary history of Madagascar's lemurs [My Copy] Genome Res., Vol. 18, No. 3. (1 March 2008), pp. 489-499. by Julie E. Horvath, David W. Weisrock, Stephanie L. Embry, et al.Isabella Fiorentino, James P. Balhoff, Peter Kappeler, Gregory A. Wray, Huntington F. Willard, Anne D. Yoder posted to cladistics lemur phylogenomics phylogeny by pradiptaray on 2008-07-04 11:33:18 as
	Biogeographic Evolution of Madagascar's Microendemic Biota [My Copy] Science, Vol. 312, No. 5776. (19 May 2006), pp. 1063-1065. by Lucienne Wilme, Steven M. Goodman, Jorg U. Ganzhorn posted to phylogeography by pradiptaray on 2008-07-04 11:30:54 as along with 1 person and 1 group cmm FAB-lab

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evolution	71
selection	34
phylogeny	19
crm	18
drosophila	18
motif	18
regulation	14
tfbs	13
genomics	12
human	11
coevolution	10
phylogeography	8
snp	7
cladistics	6
comparative	6
duplication	5
primate	5
alignment	4
hmm	4
purpuratus	4
rate	4
sea	4
urchin	4
ecology	3
endo16	3
genetics	3
grn	3
network	3
noncoding	3
species	3
test	3
vertebrate	3
yeast	3
ancestor	2
body	2
chimpanzee	2
chip-seq	2
clustering	2
darwin	2
finch	2
footprinting	2
gene	2
kreitman	2
plan	2
pwm	2
recombination	2
signalling	2
transposition	2
whole_genome	2
adh	1
annotation	1
architecture	1
arizonae	1
bacillus	1
bacteria	1
bayesian	1
bias	1
birdsong	1
bmp4	1
cetacea	1
character	1
chordate	1
coalescent	1
coding	1
coestimation	1
constrained	1
copy_number	1
cytoskeleton	1
definition	1
dinosaur	1
divergence	1
domain	1
elements	1
empirical	1
enhancer	1
ensemble	1
epigenetics	1
extinct	1
extremes	1
function	1
game_theory	1
gene_network	1
genography	1
genome	1
genotyping	1
hippopotamus	1
hky85	1
hsp70	1
influenza	1
insect	1
interrelation	1
lemur	1
malagasy	1
mammal	1
melanogaster	1
microarray	1
microsatellite	1
misidentification	1
ml	1
mobile	1
molecular	1
mrna	1
msa	1
neanderthal	1
overlap	1
overrepresentation	1
pachtor	1
pathway	1
pcr	1
phylogenetics	1
phylogenomics	1
plasmodium	1
population	1
prokaryote	1
protein	1
quantitative	1
region	1
rna	1
salix	1
sargasso	1
search	1
segmental_duplication	1
sequencing	1
sexual	1
shotgun	1
simulans	1
sm50	1
speciation	1
species_sampling	1
specificity	1
splicing	1
spurious	1
statistical_significance	1
structure	1
survey	1
tool	1
topography	1
transition	1
transposable	1
transposon	1
transversion	1
turnover	1
ultraconservation	1
ultraconserved	1
vav	1
whale	1
worm	1

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