ptrobajo's expression [90 articles] Export

Recent papers added to ptrobajo's library classified by the tag expression. You can also see everyone's expression.

	Harnessing gene expression to identify the genetic basis of drug resistance [My Copy] Molecular Systems Biology, Vol. 5 (13 October 2009) by Bo-Juen Chen, Helen C. Causton, Denesy Mancenido, Noel L. Goddard, Ethan O. Perlstein, Dana Pe'er posted to yeast resistance phenotype genotype gene expression drug causal by ptrobajo on 2009-10-14 21:06:11 as along with 4 people dswan ashishanand phoenixzxl frohike
	MicroRNA target prediction by expression analysis of host genes [My Copy] Genome Research, Vol. 19, No. 3. (16 March 2009), pp. 481-490. by Vincenzo A. Gennarino, Marco Sardiello, Raffaella Avellino, et al.Nicola Meola, Vincenza Maselli, Santosh Anand, Luisa Cutillo, Andrea Ballabio, Sandro Banfi posted to microrna microarray expression anti-correlation by ptrobajo on 2009-09-30 21:27:09 as along with 16 people and 2 groups danaiancu gbloeb guhjy tonamswish gennarino heliopais megraw tmmurali jfr samgj valeriehilgers Zephyrus pengchy giovenko daforerog ealloza microRNA Roswell Cancer Crosstalk
	mRNA expression profiles show differential regulatory effects of microRNAs between estrogen receptor-positive and estrogen receptor-negative breast cancer. [My Copy] Genome biology, Vol. 10, No. 9. (1 September 2009), R90. by Chao Cheng, Xuping Fu, Pedro Alves, Mark Gerstein posted to multimodal mrna microrna expression cancer breast by ptrobajo on 2009-09-21 14:07:55 as along with 5 people and 1 group frohike tonamswish megraw Schmidtc heliopais microRNA
	Detecting Disease-Specific Dysregulated Pathways Via Analysis of Clinical Expression Profiles [My Copy] Research in Computational Molecular Biology (2008), pp. 347-359. by Igor Ulitsky, Richard Karp, Ron Shamir posted to pathways expression disease-specific differential by ptrobajo on 2009-09-17 21:48:48 as along with 2 people poirel akshayk
	Capturing Heterogeneity in Gene Expression Studies by Surrogate Variable Analysis [My Copy] PLoS Genet, Vol. 3, No. 9. (28 September 2007), e161. by Jeffrey T. Leek, John D. Storey posted to microarray heterogeneity gene expression covariate by ptrobajo on 2009-09-17 21:39:15 as along with 5 people greg engelhardt jfr lp2 guhjy
	MMG: a probabilistic tool to identify submodules of metabolic pathways. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 8. (15 April 2008), pp. 1078-1084. by Guido Sanguinetti, Josselin Noirel, Phillip C. Wright posted to pathway npc module model mixture graph expression differential by ptrobajo on 2009-09-17 15:50:24 as along with 7 people pauldobson roys bertelsen ihpark guhjy tmmurali mdstobbe
	Hotelling's T2 multivariate profiling for detecting differential expression in microarrays [My Copy] Bioinformatics, Vol. 21, No. 14. (15 July 2005), pp. 3105-3113. by Yan Lu, Peng-Yuan Liu, Peng Xiao, Hong-Wen Deng posted to multivariate microarray hotelling expression differential by ptrobajo on 2009-09-17 15:36:58 as along with 3 people kemalpak tonamswish dquest
	Microarray based diagnosis profits from better documentation of gene expression signatures. [My Copy] PLoS computational biology, Vol. 4, No. 2. (1 February 2008), e22. by Dennis Kostka, Rainer Spang posted to signature microarray gene expression diagnosis annotation by ptrobajo on 2009-09-17 15:12:15 as along with 2 people jfr giovanni
	Analyzing gene expression data in terms of gene sets: methodological issues [My Copy] Bioinformatics, Vol. 23, No. 8. (15 April 2007), pp. 980-987. by Jelle J. Goeman, Peter Buhlmann posted to review geneset gene expression by ptrobajo on 2009-09-17 14:56:57 as along with 19 people and 3 groups hzoltan zufar srp33 bertelsen jperkins VGreiff tonamswish ipark-kaist aramesh2 ydhwang shikin raiyar ghattem jfr ealloza shigepong heliopais guhjy diging_data SIMR bioinformatics BioinfoCIPF BTS-PT-AS-CS
	Gene expression signatures, clinicopathological features, and individualized therapy in breast cancer. [My Copy] JAMA : the journal of the American Medical Association, Vol. 299, No. 13. (2 April 2008), pp. 1574-1587. by Chaitanya R. Acharya, David S. Hsu, Carey K. Anders, et al.Ariel Anguiano, Kelly H. Salter, Kelli S. Walters, Richard C. Redman, Sascha A. Tuchman, Cynthia A. Moylan, Sayan Mukherjee, William T. Barry, Holly K. Dressman, Geoffrey S. Ginsburg, Kelly P. Marcom, Katherine S. Garman, Gary H. Lyman, Joseph R. Nevins, Anil Potti posted to therapy signature gene expression cancer by ptrobajo on 2009-09-17 10:38:35 as along with 4 people bertelsen Zephyrus jfr guhjy
	Exploring the functional landscape of gene expression: directed search of large microarray compendia. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 20. (15 October 2007), pp. 2692-2699. by Matthew A. Hibbs, David C. Hess, Chad L. Myers, Curtis Huttenhower, Kai Li, Olga G. Troyanskaya posted to query gene expression compendium by ptrobajo on 2009-09-17 10:21:34 as along with 5 people and 1 group thegoose2 tharris guhjy tmmurali rdiaz Bioinformatics
	A gene expression network model of type 2 diabetes links cell cycle regulation in islets with diabetes susceptibility. [My Copy] Genome research, Vol. 18, No. 5. (17 May 2008), pp. 706-716. by Mark P. Keller, YounJeong Choi, Ping Wang, et al.Dawn Belt B. Davis, Mary E. Rabaglia, Angie T. Oler, Donald S. Stapleton, Carmen Argmann, Kathy L. Schueler, Steve Edwards, H. Adam Steinberg, Elias Chaibub Neto, Robert Kleinhanz, Scott Turner, Marc K. Hellerstein, Eric E. Schadt, Brian S. Yandell, Christina Kendziorski, Alan D. Attie posted to tissue network milka islet gene expression diabetes by ptrobajo on 2009-09-17 10:18:26 as along with 4 people druvus brianb frohike caseybrown
	A novel stepwise analysis procedure of genome-wide expression profiles identifies transcript signatures of thiamine genes as classifiers of mitochondrial mutants. [My Copy] Yeast (Chichester, England), Vol. 25, No. 2. (February 2008), pp. 129-140. by L. M. Eijssen, P. J. Lindsey, R. Peeters, et al.R. L. Westra, R. G. van Eijsden, M. Bolotin-Fukuhara, H. J. Smeets, R. F. Vlietinck posted to protein nazanin mutant mitochondrial knockout gene function expression by ptrobajo on 2009-09-17 09:46:03 as
	Integration of biological networks and gene expression data using Cytoscape. [My Copy] Nature protocols, Vol. 2, No. 10. (27 September 2007), pp. 2366-2382. by Melissa S. Cline, Michael Smoot, Ethan Cerami, et al.Allan Kuchinsky, Nerius Landys, Chris Workman, Rowan Christmas, Iliana Avila-Campilo, Michael Creech, Benjamin Gross, Kristina Hanspers, Ruth Isserlin, Ryan Kelley, Sarah Killcoyne, Samad Lotia, Steven Maere, John Morris, Keiichiro Ono, Vuk Pavlovic, Alexander R. Pico, Aditya Vailaya, Peng-Liang L. Wang, Annette Adler, Bruce R. Conklin, Leroy Hood, Martin Kuiper, Chris Sander, Ilya Schmulevich, Benno Schwikowski, Guy J. Warner, Trey Ideker, Gary D. Bader posted to network gene expression education cytoscape by ptrobajo on 2009-09-17 09:34:30 as along with 19 people and 1 group daveGerrard greg badi tonamswish daforerog bertelsen Cortel cswinburne giovenko isimpson emmackinnon yaredo Stew guhjy jfr shikin shung thomaskelder AlexanderPico GeneGo
	Learning module networks from genome-wide location and expression data [My Copy] FEBS Letters, Vol. 578, No. 3. (17 December 2004), pp. 297-304. by Xiaojiang Xu, Lianshui Wang, Dafu Ding posted to network module expression cls-anton chip-chip by ptrobajo on 2009-09-13 20:55:36 as
	Simplified ontologies allowing comparison of developmental mammalian gene expression [My Copy] Genome Biology, Vol. 8, No. 10. (25 October 2007), R229. by Adele Kruger, Oliver Hofmann, Piero Carninci, Yoshihide Hayashizaki, Winston Hide posted to ontology gene expression cross-species by ptrobajo on 2009-09-13 20:04:54 as along with 2 people annacarina07 hpaces
	GEM-TREND: a web tool for gene expression data mining toward relevant network discovery. [My Copy] BMC genomics, Vol. 10, No. 1. (3 September 2009), 411. by Chunlai Feng, Michihiro Araki, Ryo Kunimoto, et al.Akiko Tamon, Hiroki Makiguchi, Satoshi Niijima, Gozoh Tsujimoto, Yasushi Okuno posted to query network mining geo gene expression compendium by ptrobajo on 2009-09-11 20:24:05 as along with 6 people and 1 group guhjy daforerog pengchy dswan sotacam barriot Bioinformatics
	Meta-coexpression conservation analysis of microarray data: a "subset" approach provides insight into brain-derived neurotrophic factor regulation [My Copy] BMC Genomics, Vol. 10, No. 1. (8 September 2009), 420. by Tamara A. Pavlidis, Pavlos Pavlidis, Tonis Timmusk posted to subset rat mouse human expression cross-species brain by ptrobajo on 2009-09-11 12:12:59 as along with 2 people sophiya neils
	Methods for analyzing deep sequencing expression data: constructing the human and mouse promoterome with deepCAGE data [My Copy] Genome Biology, Vol. 10, No. 7. (22 July 2009), R79. by Piotr Balwierz, Piero Carninci, Carsten Daub, et al.Jun Kawai, Yoshihide Hayashizaki, Werner Van Belle, Christian Beisel, Erik van Nimwegen posted to normalization noise methodology herman expression deep-sequencing cage by ptrobajo on 2009-09-06 21:03:10 as along with 7 people vingron orzenil maximilianh inesdesantiago djkt guhjy dolchan
	A Computational Screen for Regulators of Oxidative Phosphorylation Implicates SLIRP in Mitochondrial RNA Homeostasis [My Copy] PLoS Genet, Vol. 5, No. 8. (14 August 2009), e1000590. by Joshua M. Baughman, Roland Nilsson, Vishal M. Gohil, Daniel H. Arlow, Zareen Gauhar, Vamsi K. Mootha posted to transcription phosphorylaytion oxidative mitochondrial gene factor expression compendium by ptrobajo on 2009-09-06 20:37:50 as
	Interpreting expression data with metabolic flux models: predicting Mycobacterium tuberculosis mycolic acid production. [My Copy] PLoS computational biology, Vol. 5, No. 8. (28 August 2009), e1000489. by Caroline Colijn, Aaron Brandes, Jeremy Zucker, et al.Desmond S. Lun, Brian Weiner, Maha R. Farhat, Tan-Yun Y. Cheng, D. Branch Moody, Megan Murray, James E. Galagan posted to network miranda metabolic gene flux expression by ptrobajo on 2009-09-04 21:24:51 as along with 1 person JeremyZucker
	Reduction of colonic inflammation in HLA-B27 transgenic rats by feeding Marie Ménard apples, rich in polyphenols. [My Copy] The British journal of nutrition (22 July 2009), pp. 1-9. by Cinzia Castagnini, Cristina Luceri, Simona Toti, et al.Elisabetta Bigagli, Giovanna Caderni, Angelo P. Femia, Lisa Giovannelli, Maura Lodovici, Vanessa Pitozzi, Maddalena Salvadori, Luca Messerini, Rocio Martin, Erwin G. Zoetendal, Stan Gaj, Lars Eijssen, Chris T. Evelo, Catherine M. Renard, Alain Baron, Piero Dolara posted to gene expression biorange-matching by ptrobajo on 2009-08-27 09:18:24 as
	An integrated bioinformatics approach to improve two-color microarray quality-control: impact on biological conclusions. [My Copy] Genes & nutrition, Vol. 4, No. 2. (June 2009), pp. 123-127. by Rachel I. van Haaften, Cristina Luceri, Arie van Erk, Chris T. Evelo posted to gene expression biorange-matching by ptrobajo on 2009-08-27 09:10:07 as along with 2 people and 1 group shikin guhjy BiGCaT Bioinformatics
	Suppression of inflammatory signaling in monocytes from patients with coronary artery disease. [My Copy] Journal of molecular and cellular cardiology, Vol. 46, No. 2. (February 2009), pp. 177-185. by Stephan H. Schirmer, Joost O. Fledderus, Anja M. van der Laan, et al.Tineke C. van der Pouw-Kraan, Perry D. Moerland, Oscar L. Volger, Josefien M. Baggen, Michael Böhm, Jan J. Piek, Anton J. Horrevoets, Niels van Royen posted to pathway gene expression biorange-matching by ptrobajo on 2009-08-27 08:55:29 as
	Analysis of gene expression identifies differentially expressed genes and pathways associated with lymphatic dissemination in patients with adenocarcinoma of the esophagus. [My Copy] Annals of surgical oncology, Vol. 15, No. 12. (1 December 2008), pp. 3459-3470. by S. M. Lagarde, P. E. Ver Loren van Themaat, P. D. Moerland, et al.L. A. Gilhuijs-Pederson, F. J. Ten Kate, P. H. Reitsma, A. H. van Kampen, A. H. Zwinderman, F. Baas, J. J. van Lanschot posted to pathway gene expression biorange-matching by ptrobajo on 2009-08-27 08:54:32 as
	Boosting and Microarray Data [My Copy] Mach. Learn., Vol. 52, No. 1-2. (2003), pp. 31-44. by Philip M. Long, Vinsensius B. Vega posted to boosting expression herman microarray by ptrobajo on 2009-08-01 10:32:35 as
	Gene expression signatures that predict radiation exposure in mice and humans. [My Copy] PLoS medicine, Vol. 4, No. 4. (3 April 2007), e106. by Holly K. Dressman, Garrett G. Muramoto, Nelson J. Chao, et al.Sarah Meadows, Dawn Marshall, Geoffrey S. Ginsburg, Joseph R. Nevins, John P. Chute posted to cross-species expression gene lukas radiation by ptrobajo on 2009-06-15 08:57:04 as
	Gene Expression Signatures of Radiation Response Are Specific, Durable and Accurate in Mice and Humans [My Copy] PLoS ONE, Vol. 3, No. 4. (2 April 2008), e1912. by Sarah K. Meadows, Holly K. Dressman, Garrett G. Muramoto, et al.Heather Himburg, Alice Salter, Zhengzheng Wei, Geoff Ginsburg, Nelson J. Chao, Joseph R. Nevins, John P. Chute posted to cross-species expression gene lukas radiation signature by ptrobajo on 2009-06-15 08:52:51 as
	Uncovering a Macrophage Transcriptional Program by Integrating Evidence from Motif Scanning and Expression Dynamics [My Copy] PLoS Comput Biol, Vol. 4, No. 3. (21 March 2008), e1000021. by Stephen A. Ramsey, Sandy L. Klemm, Daniel E. Zak, et al.Kathleen A. Kennedy, Vesteinn Thorsson, Bin Li, Mark Gilchrist, Elizabeth S. Gold, Carrie D. Johnson, Vladimir Litvak, Garnet Navarro, Jared C. Roach, Carrie M. Rosenberger, Alistair G. Rust, Natalya Yudkovsky, Alan Aderem, Ilya Shmulevich posted to expression factor gene macrophage series stephan time transcription by ptrobajo on 2009-06-09 12:03:04 as along with 3 people and 1 group nicholasflann isimpson talponer Jarman Lab
	A Differential Wiring Analysis of Expression Data Correctly Identifies the Gene Containing the Causal Mutation [My Copy] PLoS Comput Biol, Vol. 5, No. 5. (1 May 2009), e1000382. by Nicholas J. Hudson, Antonio Reverter, Brian P. Dalrymple posted to differential expression factor network transcription coexpression by ptrobajo on 2009-05-04 14:38:00 as along with 10 people rdiaz guhjy tmmurali Borelli giovanni cabbagesofdoom roys chrisamiller dswan dolchan
	Three methods for optimization of cross-laboratory and cross-platform microarray expression data. [My Copy] Nucleic Acids Res, Vol. 35, No. 10. (2007) by P. Stafford, M. Brun posted to classification cross-validation expression herman microarray by ptrobajo on 2009-04-08 08:01:03 as along with 4 people heliopais guhjy jfr bertelsen
	Repeatability of published microarray gene expression analyses. [My Copy] Nature genetics, Vol. 41, No. 2. (28 February 2009), pp. 149-155. by John P. Ioannidis, David B. Allison, Catherine A. Ball, et al.Issa Coulibaly, Xiangqin Cui, Aedín C. Culhane, Mario Falchi, Cesare Furlanello, Laurence Game, Giuseppe Jurman, Jon Mangion, Tapan Mehta, Michael Nitzberg, Grier P. Page, Enrico Petretto, Vera van Noort posted to expression microarray repeatibility review by ptrobajo on 2009-03-20 13:49:43 as along with 21 people and 1 group hzoltan heliopais ericrpaquet guhjy greg frohike TRHvidsten giovenko jfr rdiaz zufar floatingpoint felsani nuin daforerog cabbagesofdoom dswan Zephyrus inesdesantiago djkt paszkows Roswell Cancer Crosstalk
	Quality assessment and data analysis for microRNA expression arrays. [My Copy] Nucleic acids research, Vol. 37, No. 2. (1 February 2009), e17. by D. Sarkar, R. Parkin, S. Wyman, et al.A. Bendoraite, C. Sather, J. Delrow, A. K. Godwin, C. Drescher, W. Huber, R. Gentleman, M. Tewari posted to expression marcel microarray microrna normalization by ptrobajo on 2009-03-04 21:34:04 as along with 6 people and 2 groups jfr Stew nuin baldigroup guhjy giovenko microRNA Bioinformatics - CRUK
	Cross-species comparison of genome-wide expression patterns [My Copy] Genome Biology, Vol. 5, No. 7. (2004) by Xianghong Zhou, Greg Gibson posted to cross-species expression review genome-wide by ptrobajo on 2008-12-07 21:24:01 as
	Investigating the correspondence between transcriptomic and proteomic expression profiles using coupled cluster models [My Copy] Bioinformatics, Vol. 24, No. 24. (15 December 2008), pp. 2894-2900. by Simon Rogers, Mark Girolami, Walter Kolch, et al.Katrina M. Waters, Tao Liu, Brian Thrall, H. Steven Wiley posted to clustering expression proteomics transcriptomics by ptrobajo on 2008-12-04 22:39:10 as along with 9 people donalddunbar TRHvidsten jfr mpitman dswan allysonlister sjcockell rdiaz guhjy
	Comparative analysis indicates regulatory neofunctionalization of yeast duplicates [My Copy] Genome Biology, Vol. 8, No. 4. (05 April 2007), R50. by Itay Tirosh, Naama Barkai posted to correlation cross-species expression gene by ptrobajo on 2008-12-04 17:27:11 as along with 5 people and 2 groups azazello adepace stajich cisevol ajpowell EisenLab cis-regulatory-evolution
	Evidence for a role of developmental genes in the origin of obesity and body fat distribution. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 17. (25 April 2006), pp. 6676-6681. by S. Gesta, M. Blüher, Y. Yamamoto, et al.A. W. Norris, J. Berndt, S. Kralisch, J. Boucher, C. Lewis, C. R. Kahn posted to cross-species expression fat gene human mouse obesity by ptrobajo on 2008-11-24 20:41:57 as along with 2 people xinhonglim cybaer1
	Multi-objective evolutionary biclustering of gene expression data [My Copy] Pattern Recognition, Vol. 39, No. 12. (December 2006), pp. 2464-2477. by S. Mitra, H. Banka posted to biclustering evolutionary expression gene herman by ptrobajo on 2008-11-20 08:38:53 as
	Identifying differential correlation in gene/pathway combinations [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (18 November 2008), 488. by Rosemary Braun, Leslie Cope, Giovanni Parmigiani posted to differential expression gene geneset pathway by ptrobajo on 2008-11-19 08:57:29 as along with 11 people dolchan dipenps zufar jfr shikin mdstobbe imina rdiaz renatomilani lptolik barriot
	The properties of high-dimensional data spaces: implications for exploring gene and protein expression data [My Copy] Nat Rev Cancer, Vol. 8, No. 1. (01 January 2008), pp. 37-49. by Robert Clarke, Habtom W. Ressom, Antai Wang, et al.Jianhua Xuan, Minetta C. Liu, Edmund A. Gehan, Yue Wang posted to classification education expression by ptrobajo on 2008-11-07 15:06:08 as along with 17 people and 1 group Zephyrus aviad_work ipark-kaist isimpson Scis0000002 baizhang bertelsen jfr guhjy tmmurali dwf frohike cjeans nedwards shikin blackm0k brianb Bioinformatics
	Prediction of radiation sensitivity using a gene expression classifier. [My Copy] Cancer research, Vol. 65, No. 16. (15 August 2005), pp. 7169-7176. by J. F. Torres-Roca, S. Eschrich, H. Zhao, et al.G. Bloom, J. Sung, S. McCarthy, A. B. Cantor, A. Scuto, C. Li, S. Zhang, R. Jove, T. Yeatman posted to expression gene lukas radiation regression sensitivity by ptrobajo on 2008-10-30 21:23:32 as
	Key issues in conducting a meta-analysis of gene expression microarray datasets. [My Copy] PLoS medicine, Vol. 5, No. 9. (30 September 2008), e184. by Adaikalavan Ramasamy, Adrian Mondry, Chris C. Holmes, Douglas G. Altman posted to expression gene meta-analysis review by ptrobajo on 2008-10-29 21:30:32 as along with 11 people and 1 group zufar greg frohike lwaldron daforerog Zephyrus shikin druvus guhjy aviad_work jfr Roswell Cancer Crosstalk
	Causal inference in biomolecular pathways using a Bayesian network approach and an Implicit method [My Copy] Journal of Theoretical Biology, Vol. In Press, Corrected Proof by Ben, Afif Masmoudi, Ahmed Rebai posted to bayesian expression microarray network pathway by ptrobajo on 2008-10-26 21:33:47 as along with 1 person jxl
	Expression-based Pathway Signature Analysis (EPSA): Mining publicly available microarray data for insight into human disease. [My Copy] BMC medical genomics, Vol. 1, No. 1. (20 October 2008) by Jessica D. Tenenbaum, Michael G. Walker, Paul J. Utz, Atul J. Butte posted to compendium disease expression signature pathway by ptrobajo on 2008-10-26 20:20:39 as along with 9 people dolchan ipark-kaist jfr zufar daforerog imina guhjy huiminC oelemento
	Determinants of protein abundance and translation efficiency in S. cerevisiae. [My Copy] PLoS computational biology, Vol. 3, No. 12. (21 December 2007), e248. by Tamir Tuller, Martin Kupiec, Eytan Ruppin posted to abundance expression model protein by ptrobajo on 2008-10-23 14:48:24 as
	Conservation of Expression and Sequence of Metabolic Genes Is Reflected by Activity Across Metabolic States. [My Copy] PLoS Comput Biol, Vol. 2, No. 8. (18 August 2006) by Yonatan Bilu, Tomer Shlomi, Naama Barkai, Eytan Ruppin posted to conservation expression metabolic sequence by ptrobajo on 2008-10-22 21:26:21 as along with 3 people and 2 groups JeremyZucker nickluscombe edwardmorrissey EBI-regulation MetabolicModeling
	Coordination of Growth Rate, Cell Cycle, Stress Response, and Metabolic Activity in Yeast. [My Copy] Mol Biol Cell (24 October 2007) by Matthew J J. Brauer, Curtis Huttenhower, Edoardo M M. Airoldi, et al.Rachel Rosenstein, John C C. Matese, David Gresham, Viktor M M. Boer, Olga G G. Troyanskaya, David Botstein posted to expression gene nazanin peroxisome yeast by ptrobajo on 2008-10-17 21:36:12 as along with 2 people dbenn roys
	Dissection of transient oxidative stress response in Saccharomyces cerevisiae by using DNA microarrays. [My Copy] Molecular biology of the cell, Vol. 13, No. 8. (August 2002), pp. 2783-2794. by M. G. Koerkamp, M. Rep, H. J. Bussemaker, et al.G. P. Hardy, A. Mul, K. Piekarska, C. A. Szigyarto, J. M. De Mattos, H. F. Tabak posted to expression gene microarray nazanin peroxisome yeast by ptrobajo on 2008-10-17 21:22:04 as
	Genome-wide analysis of signaling networks regulating fatty acid-induced gene expression and organelle biogenesis. [My Copy] The Journal of cell biology, Vol. 181, No. 2. (21 April 2008), pp. 281-292. by R. A. Saleem, B. Knoblach, F. D. Mast, et al.J. J. Smith, J. Boyle, C. M. Dobson, R. Long-O'Donnell, R. A. Rachubinski, J. D. Aitchison posted to biogenesis expression gene nazanin peroxisome signaling yeast by ptrobajo on 2008-10-17 21:16:21 as
	Transcriptome profiling to identify genes involved in peroxisome assembly and function. [My Copy] The Journal of cell biology, Vol. 158, No. 2. (22 July 2002), pp. 259-271. by J. J. Smith, M. Marelli, R. H. Christmas, et al.F. J. Vizeacoumar, D. J. Dilworth, T. Ideker, T. Galitski, K. Dimitrov, R. A. Rachubinski, J. D. Aitchison posted to expression gene nazanin peroxisome yeast by ptrobajo on 2008-10-17 21:09:35 as

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network	153
microarray	119
expression	90
cross-species	87
gene	80
pathway	73
miranda	60
geneset	58
nazanin	58
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mouse	50
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herman	28
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wouter	25
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seldi	24
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dragan	21
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milka	15
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knockout	13
sara	13
systems	13
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bayesian	12
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array	2
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asthma	2
atherosclerosis	2
background	2
batch	2
biogenesis	2
bioinformatics	2
bypass	2
canonical	2
carsten	2
celegans	2
clinical	2
clique	2
combination	2
combinatorial	2
concept	2
condition	2
confidence	2
connectivity	2
copy	2
correction	2
cross-hybridization	2
cyc	2
deconvolution	2
diagnosis	2
dna	2
domain	2
enzyme	2
epistasis	2
epxression	2
e-qtl	2
evolution	2
evolutionary	2
fat	2
fdr	2
frequent	2
fruitfly	2
go	2
gsea	2
guidelines	2
hierarchical	2
homology	2
hotelling	2
immune	2
immunology	2
interactome	2
interpretation	2
interval	2
itemset	2
kinetic	2
lasso	2
lda	2
list	2
macrophage	2
measurement	2
metagene	2
metastasis	2
method	2
methodology	2
miape	2
micorarray	2
mirna	2
molecular	2
molecule	2
mutant	2
next-generation	2
number	2
organization	2
ovarian	2
overlap	2
pathvisio	2
pca	2
peptide	2
phenome	2
plant	2
pooling	2
prior	2
protocol	2
reaction	2
reannotation	2
reduction	2
resistance	2
ribosomal	2
rnai	2
rodent	2
rosetta	2
r-package	2
service	2
similarity	2
small	2
spike-in	2
standards	2
statistical	2
subcellular	2
synthetic	2
syntren	2
system	2
testing	2
tiling	2
transitive	2
unlabeled	2
variation	2
wikipathways	2
zebrafish	2
70-gene	1
abundance	1
acgh	1
acid	1
adaptive	1
adipocyte	1
adult	1
aging	1
algorithm	1
alternating	1
amplification	1
angiogenic	1
animal	1
anova	1
anti-correlation	1
anton-cls	1
application	1
approximation	1
arrayexpress	1
atlas	1
attribute	1
backpropagation	1
bayes	1
bicluster	1
biclustering	1
bigg	1
bimodality	1
biomart	1
biopax	1
blast	1
blosum62	1
cadmium	1
cage	1
candidate	1
capture	1
cardiac	1
case-control	1
causal	1
cervical	1
chemogenomics	1
chemosensitivity	1
chimera	1
chimpanzee	1
chip-chip	1
chip-seq	1
chromosome	1
classificatiion	1
cluster	1
cnv	1
code	1
coding	1
coevolution	1
co-expression	1
collateral	1
combinatorics	1
community	1
completeness	1
complex	1
compound	1
connection	1
conservation	1
conserved	1
constraint	1
context	1
context-specific	1
covariate	1
crm	1
crohn	1
curation	1
cytokine	1
cytoscape	1
dave	1
decision	1
deletions	1
detection	1
dictionary	1
diet	1
dietary	1
dimension	1
direct	1
dirichlet	1
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discriminatory	1
disorder	1
efficient	1
egfr	1
eigengene	1
element	1
elementary	1
em	1
e-map	1
empirical	1
endocytosis	1
ensemble	1
er	1
error	1
ethics	1
eukaryote	1
exon	1
expectation	1
experiment	1
fatty	1
feedback	1
flux	1
fly	1
focusing	1
fto	1
fuzzy	1
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gapdh	1
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gaussian	1
gel	1
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genomics	1
geometric	1
gerben	1
glioma	1
global	1
glucose	1
glucosykceramide	1
grammer	1
grid	1
groningen	1
group	1
gui	1
hapmap	1
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hexamer	1
hidden	1
hierarchy	1
histone	1
hmm	1
hnf	1
hub	1
humna	1
hypergraph	1
identifier	1
imaging	1
inbred_strains	1
individual	1
ineractome	1
insulin_resistance	1
interferon	1
intrinsic	1
islet	1
isoelectric	1
item	1
jamboree	1
joint	1
juvenile	1
kholodenko	1
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laser	1
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ligand	1
line	1
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literature	1
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logic	1
lps	1
lung	1
lupus	1
macaques	1
machine	1
mammalian	1
maqc	1
markov	1
matching	1
maximization	1
measure	1
mechanistic	1
metabolite	1

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