ptrobajo's human [41 articles] Export

Recent papers added to ptrobajo's library classified by the tag human. You can also see everyone's human.

	Looking at Cerebellar Malformations through Text-Mined Interactomes of Mice and Humans [My Copy] PLoS Comput Biol, Vol. 5, No. 11. (6 November 2009), e1000559. by Ivan Iossifov, Raul Rodriguez-Esteban, Ilya Mayzus, Kathleen J. Millen, Andrey Rzhetsky posted to text mouse mining interactome human cross-species brain br45 by ptrobajo on 2009-11-20 13:52:39 as
	The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes. [My Copy] Genome research, Vol. 19, No. 7. (4 July 2009), pp. 1316-1323. by Kim D. Pruitt, Jennifer Harrow, Rachel A. Harte, et al.Craig Wallin, Mark Diekhans, Donna R. Maglott, Steve Searle, Catherine M. Farrell, Jane E. Loveland, Barbara J. Ruef, Elizabeth Hart, Marie-Marthe M. Suner, Melissa J. Landrum, Bronwen Aken, Sarah Ayling, Robert Baertsch, Julio Fernandez-Banet, Joshua L. Cherry, Val Curwen, Michael Dicuccio, Manolis Kellis, Jennifer Lee, Michael F. Lin, Michael Schuster, Andrew Shkeda, Clara Amid, Garth Brown, Oksana Dukhanina, Adam Frankish, Jennifer Hart, Bonnie L. Maidak, Jonathan Mudge, Michael R. Murphy, Terence Murphy, Jeena Rajan, Bhanu Rajput, Lillian D. Riddick, Catherine Snow, Charles Steward, David Webb, Janet A. Weber, Laurens Wilming, Wenyu Wu, Ewan Birney, David Haussler, Tim Hubbard, James Ostell, Richard Durbin, David Lipman posted to protein mouse human gene cross-species consensus coding by ptrobajo on 2009-10-14 20:45:28 as along with 4 people and 1 group megraw timhubbard idonaldson ppgardne Journal picks
	A methodology for the analysis of differential coexpression across the human lifespan [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (22 September 2009), 306. by Jesse Gillis, Paul Pavlidis posted to human differential compendium coexpression by ptrobajo on 2009-09-27 20:25:52 as
	Conserved Expression Patterns Predict microRNA Targets [My Copy] PLoS Comput Biol, Vol. 5, No. 9. (25 September 2009), e1000513. by William Ritchie, Megha Rajasekhar, Stephane Flamant, John E. J. Rasko posted to mouse microrna human cross-species coexpression by ptrobajo on 2009-09-26 21:22:06 as along with 11 people and 1 group jperkins heliopais gdb samgj ealloza toni_marco neils al2na TRHvidsten djkt cisevol microRNA
	Comparison of human and rat uterine leiomyomata: identification of a dysregulated mammalian target of rapamycin pathway. [My Copy] Cancer research, Vol. 69, No. 15. (1 August 2009), pp. 6171-6178. by Judy S. Crabtree, Scott A. Jelinsky, Heather A. Harris, et al.Sung E. Choe, Monette M. Cotreau, Michelle L. Kimberland, Ewa Wilson, Kathryn A. Saraf, Wei Liu, Adrienne S. McCampbell, Bhuvanesh Dave, Russell R. Broaddus, Eugene L. Brown, Wenling Kao, Jerauld S. Skotnicki, Magid Abou-Gharbia, Richard C. Winneker, Cheryl L. Walker posted to rat pahtway microarray human geneset cross-species by ptrobajo on 2009-09-21 22:27:22 as
	A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat. [My Copy] BMC bioinformatics, Vol. 8 (20 April 2007), 132. by Rudi Alberts, Peter Terpstra, Menno Hardonk, et al.Leonid V. Bystrykh, Gerald de Haan, Rainer Breitling, Jan-Peter P. Nap, Ritsert C. Jansen posted to reannotation rat mouse human affymetrix by ptrobajo on 2009-09-17 10:52:09 as along with 4 people heliopais guhjy jfr ghattem
	Host immune system gene targeting by a viral miRNA. [My Copy] Science (New York, N.Y.), Vol. 317, No. 5836. (20 July 2007), pp. 376-381. by Noam Stern-Ginossar, Naama Elefant, Albert Zimmermann, et al.Dana G. Wolf, Nivin Saleh, Moshe Biton, Elad Horwitz, Zafnat Prokocimer, Mark Prichard, Gabriele Hahn, Debra Goldman-Wohl, Caryn Greenfield, Simcha Yagel, Hartmut Hengel, Yael Altuvia, Hanah Margalit, Ofer Mandelboim posted to microrna viral system model markov immune human hidden by ptrobajo on 2009-09-17 10:34:24 as along with 3 people and 2 groups mtagaya wsjames eskay Bioinformatics Oxford Virology
	Human disease classification in the postgenomic era: a complex systems approach to human pathobiology. [My Copy] Molecular systems biology, Vol. 3 (10 July 2007) by Joseph Loscalzo, Isaac Kohane, Albert-Laszlo L. Barabasi posted to systems human disease classification by ptrobajo on 2009-09-17 10:23:18 as along with 9 people and 2 groups Scis0000002 zufar Yanno kentsis jfr yas dchughes zwang nolodie G4ID Genetics-of-Gambling
	A human phenome-interactome network of protein complexes implicated in genetic disorders [My Copy] Nature Biotechnology, Vol. 25, No. 3. (07 March 2007), pp. 309-316. by Kasper Lage, E. Olof Karlberg, Zenia M. Storling, et al.Pall I. Olason, Anders G. Pedersen, Olga Rigina, Anders M. Hinsby, Zeynep Tumer, Flemming Pociot, Niels Tommerup, Yves Moreau, Soren Brunak posted to phenome ineractome human genetic disorder disease by ptrobajo on 2009-09-12 22:04:03 as along with 14 people and 1 group seb1 daforerog saket carlk yyby daed guhjy kuhn jfr ealloza JBEgwa01 grahamc cjeans jiny BioinfoCIPF
	Mapping similarities in mTOR pathway perturbations in mouse lupus nephritis models and human lupus nephritis. [My Copy] Arthritis research & therapy, Vol. 10, No. 6. (03 November 2008), R127. by Padmalatha S. Reddy, Holly M. Legault, Joseph P. Sypek, et al.Mark J. Collins, Elizabeth Goad, Samuel J. Goldman, Wei Liu, Stuart Murray, Andrew J. Dorner, Margot O'Toole posted to pathway mouse lupus human cross-species by ptrobajo on 2009-09-11 21:15:41 as
	Meta-coexpression conservation analysis of microarray data: a "subset" approach provides insight into brain-derived neurotrophic factor regulation [My Copy] BMC Genomics, Vol. 10, No. 1. (8 September 2009), 420. by Tamara A. Pavlidis, Pavlos Pavlidis, Tonis Timmusk posted to subset rat mouse human expression cross-species brain by ptrobajo on 2009-09-11 12:12:59 as along with 2 people sophiya neils
	Meta-analysis approach identifies candidate genes and associated molecular networks for type-2 diabetes mellitus. [My Copy] BMC genomics, Vol. 9 (30 June 2008), 310. by Axel Rasche, Hadi Al-Hasani, Ralf Herwig posted to network mouse human diabetes cross-species by ptrobajo on 2009-09-11 09:40:52 as along with 3 people daforerog amromeo guhjy
	A Mouse Model for the Metabolic Effects of the Human Fat Mass and Obesity Associated FTO Gene [My Copy] PLoS Genet, Vol. 5, No. 8. (14 August 2009), e1000599. by Chris Church, Sheena Lee, Eleanor A. L. Bagg, et al.James S. McTaggart, Robert Deacon, Thomas Gerken, Angela Lee, Lee Moir, Jasmin Mecinović, Mohamed M. Quwailid, Christopher J. Schofield, Frances M. Ashcroft, Roger D. Cox posted to obesity mutation mouse human fto cross-species by ptrobajo on 2009-09-06 20:39:01 as
	Comparative analysis of gene regulation by the transcription factor PPARalpha between mouse and human. [My Copy] PloS one, Vol. 4, No. 8. (2009) by Maryam Rakhshandehroo, Guido Hooiveld, Michael Müller, Sander Kersten posted to transcription ppar mouse milka microarray human factor cross-species by ptrobajo on 2009-09-04 21:10:21 as
	Smoothened Mutation Confers Resistance to a Hedgehog Pathway Inhibitor in Medulloblastoma [My Copy] Science (2 September 2009), 1179386. by Robert L. Yauch, Gerrit J. P. Dijkgraaf, Bruno Alicke, et al.Thomas Januario, Christina P. Ahn, Thomas Holcomb, Kanan Pujara, Jeremy Stinson, Christopher A. Callahan, Tracy Tang, J. Fernando Bazan, Zhengyan Kan, Somasekar Seshagiri, Christine L. Hann, Stephen E. Gould, Jennifer A. Low, Charles M. Rudin, Frederic J. de Sauvage posted to mutation mouse human cross-species cancer by ptrobajo on 2009-09-04 21:08:38 as along with 3 people carelcad jessopher renatomilani
	Comparative systems biology of human and mouse as a tool to guide the modeling of human placental pathology. [My Copy] Molecular systems biology, Vol. 5 (16 June 2009) by Brian Cox, Max Kotlyar, Andreas I. Evangelou, et al.Vladimir Ignatchenko, Alex Ignatchenko, Kathie Whiteley, Igor Jurisica, S. Lee Adamson, Janet Rossant, Thomas Kislinger posted to proteomics placenta mouse human cross-species by ptrobajo on 2009-08-28 16:05:23 as along with 1 person mingzhi
	Exploring the human genome with functional maps. [My Copy] Genome research, Vol. 19, No. 6. (1 June 2009), pp. 1093-1106. by Curtis Huttenhower, Erin M. Haley, Matthew A. Hibbs, et al.Vanessa Dumeaux, Daniel R. Barrett, Hilary A. Coller, Olga G. Troyanskaya posted to network integration human functional by ptrobajo on 2009-08-25 13:58:40 as along with 9 people jfr daforerog fenghezi shikin idoerg guhjy pinney grahamc pkonings
	Human and mouse switch-like genes share common transcriptional regulatory mechanisms for bimodality [My Copy] BMC Genomics, Vol. 9, No. 1. (23 December 2008), 628. by Adam Ertel, Aydin Tozeren posted to bimodality cross-species human mouse by ptrobajo on 2009-08-03 08:58:29 as
	Towards better mouse models: enhanced genotypes, systemic phenotyping and envirotype modelling [My Copy] Nature Reviews Genetics, Vol. 10, No. 6., pp. 371-380. by Johannes Beckers, Wolfgang Wurst, Martin H. de Angelis posted to cross-species genotype human model mouse phenotype by ptrobajo on 2009-06-02 21:40:05 as
	Cross-species comparison of human and mouse intestinal polyps reveals conserved mechanisms in adenomatous polyposis coli (APC)-driven tumorigenesis. [My Copy] The American journal of pathology, Vol. 172, No. 5. (May 2008), pp. 1363-1380. by C. Gaspar, J. Cardoso, P. Franken, et al.L. Molenaar, H. Morreau, G. Möslein, J. Sampson, J. M. Boer, R. X. de Menezes, R. Fodde posted to cross-species human microarray mouse tumor by ptrobajo on 2009-05-21 07:31:09 as
	Understanding human metabolic physiology: a genome-to-systems approach [My Copy] Trends in Biotechnology, Vol. 27, No. 1. (14 January 2009), pp. 37-44. by M. Mo, B. Palsson posted to human jamboree metabolic miranda network review by ptrobajo on 2009-03-19 15:56:53 as along with 5 people mingzhi schwartzjmc agonzale guhjy dullhunk
	Species-Specific Transcription in Mice Carrying Human Chromosome 21 [My Copy] Science (11 September 2008), 1160930. by Michael D. Wilson, Nuno L. Barbosa-Morais, Dominic Schmidt, et al.Caitlin M. Conboy, Lesley Vanes, Victor L. Tybulewicz, Elizabeth M. Fisher, Simon Tavare, Duncan T. Odom posted to chimera chromosome cross-species human mouse transcription by ptrobajo on 2008-12-01 10:08:28 as along with 19 people and 2 groups ajaymalik cassj jbhiatt GustavoLacerda ivanek kaarsinogen jmjimenez jessopher isimpson dlobo djkt strands caseybrown erel10 Zephyrus sebastien_vigneau Stew bpcusack emptyhb GEB Roswell Cancer Crosstalk
	Evidence for a role of developmental genes in the origin of obesity and body fat distribution. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 17. (25 April 2006), pp. 6676-6681. by S. Gesta, M. Blüher, Y. Yamamoto, et al.A. W. Norris, J. Berndt, S. Kralisch, J. Boucher, C. Lewis, C. R. Kahn posted to cross-species expression fat gene human mouse obesity by ptrobajo on 2008-11-24 20:41:57 as along with 2 people xinhonglim cybaer1
	GRB14, GPD1, and GDF8 as potential network collaborators in weight loss-induced improvements in insulin action in human skeletal muscle [My Copy] Physiol. Genomics, Vol. 27, No. 2. (11 October 2006), pp. 114-121. by Jung-Jun Park, Jason R. Berggren, Matthew W. Hulver, Joseph A. Houmard, Eric P. Hoffman posted to bypass cross-species human microarray obesity by ptrobajo on 2008-11-24 13:53:20 as
	The conserved transcriptome in human and rodent male gametogenesis [My Copy] PNAS, Vol. 104, No. 20. (15 May 2007), pp. 8346-8351. by Frederic Chalmel, Antoine D. Rolland, Christa Niederhauser-Wiederkehr, et al.Sanny S. Chung, Philippe Demougin, Alexandre Gattiker, James Moore, Jean-Jacques Patard, Debra J. Wolgemuth, Bernard Jegou, Michael Primig posted to cross-species gametogenesis human mouse transcriptomics by ptrobajo on 2008-11-10 22:29:49 as along with 2 people and 2 groups dchughes usagi-kirin G4ID Genetics-of-Gambling
	An oncogenic KRAS2 expression signature identified by cross-species gene-expression analysis [My Copy] Nature Genetics, Vol. 37, No. 1. (19 December 2004), 48. by Alejandro Sweet-Cordero, Sayan Mukherjee, Aravind Subramanian, et al.Han You, Jeffrey J. Roix, Christine Ladd-Acosta, Jill Mesirov, Todd R. Golub, Tyler Jacks posted to cross-species enrichment geneset human mouse signature by ptrobajo on 2008-10-30 21:27:11 as along with 3 people and 1 group jfr ealloza srp33 BioinfoCIPF
	Cross-species oncogenomics in cancer gene identification. [My Copy] Cell, Vol. 125, No. 7. (30 June 2006), pp. 1230-1233. by D. Peeper, A. Berns posted to cancer cross-species human mouse by ptrobajo on 2008-10-30 21:18:12 as
	Multiple Oncogenic Pathway Signatures Show Coordinate Expression Patterns in Human Prostate Tumors [My Copy] PLoS ONE, Vol. 3, No. 3. (19 March 2008), e1816. by Chad J. Creighton posted to cross-species human microarray mouse tumor by ptrobajo on 2008-10-30 20:52:53 as along with 2 people ipark-kaist jfr
	Protein networks markedly improve prediction of subcellular localization in multiple eukaryotic species [My Copy] Nucl. Acids Res. (4 October 2008), gkn619. by Kiyoung Lee, Han-Yu Chuang, Andreas Beyer, et al.Min-Kyung Sung, Won-Ki Huh, Bonghee Lee, Trey Ideker posted to fly human localization nazanin network protein yeast by ptrobajo on 2008-10-27 14:34:31 as along with 6 people tienholin carlk brianb neils grahamc giovenko
	The mouse ascending: perspectives for human-disease models [My Copy] Nature Cell Biology, Vol. 9, No. 9., pp. 993-999. by Nadia Rosenthal, Steve Brown posted to cross-species disease human mouse by ptrobajo on 2008-10-20 22:19:08 as
	Sequence-based discovery of the human and rodent peroxisomal proteome. [My Copy] Applied bioinformatics, Vol. 4, No. 2. (2005), pp. 93-104. by I. V. Kurochkin, T. Nagashima, A. Konagaya, C. Schönbach posted to human localization nazanin peroxisome rodent by ptrobajo on 2008-10-17 21:45:20 as
	The mouse as a model for human biology: a resource guide for complex trait analysis [My Copy] Nature Reviews Genetics, Vol. 8, No. 1., pp. 58-69. by Luanne L. Peters, Raymond F. Robledo, Carol J. Bult, Gary A. Churchill, Beverly J. Paigen, Karen L. Svenson posted to cross-species human mouse review trait by ptrobajo on 2008-10-17 13:32:09 as along with 2 people guhjy mcgannd
	InnateDB: facilitating systems-level analyses of the mammalian innate immune response [My Copy] Mol Syst Biol, Vol. 4 (2008) by David J. Lynn, Geoffrey L. Winsor, Calvin Chan, et al.Nicolas Richard, Matthew R. Laird, Aaron Barsky, Jennifer L. Gardy, Fiona M. Roche, Timothy H. Chan, Naisha Shah, Raymond Lo, Misbah Naseer, Jaimmie Que, Melissa Yau, Michael Acab, Dan Tulpan, Matthew D. Whiteside, Avinash Chikatamarla, Bernadette Mah, Tamara Munzner, Karsten Hokamp, Robert E. Hancock, Fiona S. Brinkman posted to cross-species human immune mouse response systems by ptrobajo on 2008-10-17 13:22:52 as
	GENETICS: It's the Sequence, Stupid! [My Copy] Science, Vol. 322, No. 5900. (17 October 2008), pp. 380-381. by Hilary A. Coller, Leonid Kruglyak posted to cross-species factor human mouse transcription tissue-specific by ptrobajo on 2008-10-17 11:08:43 as along with 10 people and 4 groups siebert GustavoLacerda Zephyrus cisevol isimpson dlobo bpcusack reyez djkt marck Roswell Cancer Crosstalk cis-regulatory-evolution BergmanLab GEB
	Prediction of human disease genes by human-mouse conserved coexpression analysis. [My Copy] PLoS computational biology, Vol. 4, No. 3. (March 2008) by Ugo Ala, Rosario Michael M. Piro, Elena Grassi, et al.Christian Damasco, Lorenzo Silengo, Martin Oti, Paolo Provero, Ferdinando Di Cunto posted to conserved cross-species disease expression human mouse prioritization by ptrobajo on 2008-10-06 10:16:46 as along with 6 people jeremymiller fisherp provero jfr guhjy wenhui
	Identification of conserved gene expression features between murine mammary carcinoma models and human breast tumors [My Copy] Genome Biology, Vol. 8, No. 5. (10 May 2007), R76. by Jason Herschkowitz, Karl Simin, Victor Weigman, et al.Igor Mikaelian, Jerry Usary, Zhiyuan Hu, Karen Rasmussen, Laundette Jones, Shahin Assefnia, Subhashini Chandrasekharan, Michael Backlund, Yuzhi Yin, Andrey Khramtsov, Roy Bastein, John Quackenbush, Robert Glazer, Powel Brown, Jeffrey Green, Levy Kopelovich, Priscilla Furth, Juan Palazzo, Olufunmilayo Olopade, Philip Bernard, Gary Churchill, Terry Van Dyke, Charles Perou posted to cancer cross-species human microarray mouse by ptrobajo on 2008-07-14 21:52:03 as along with 1 person frohike
	A map of human protein interactions derived from co-expression of human mRNAs and their orthologs [My Copy] Mol Syst Biol, Vol. 4 (15 April 2008) by Arun K. Ramani, Zhihua Li, G. Traver Hart, Mark W. Carlson, Daniel R. Boutz, Edward M. Marcotte posted to compendium cross-species human interaction microarray ortholog protein-protein by ptrobajo on 2008-06-18 11:04:47 as along with 11 people and 2 groups kgutwin windman83 druvus jeremymiller tmmurali biomcgary phoenixzxl zwang giovanni grahamc ardalby KeatingJClub OPIG
	Combined Analysis of Murine and Human Microarrays and ChIP Analysis Reveals Genes Associated with the Ability of MYC To Maintain Tumorigenesis [My Copy] PLoS Genet, Vol. 4, No. 6. (6 June 2008), e1000090. by Chi-Hwa Wu, Debashis Sahoo, Constadina Arvanitis, Nicole Bradon, David L. Dill, Dean W. Felsher posted to cross-species factor human microarray mouse myc transcription by ptrobajo on 2008-06-18 09:07:56 as along with 1 person tibbitts
	A neutral model of transcriptome evolution. [My Copy] PLoS biology, Vol. 2, No. 5. (May 2004) by Philipp Khaitovich, Gunter Weiss, Michael Lachmann, et al.Ines Hellmann, Wolfgang Enard, Bjoern Muetzel, Ute Wirkner, Wilhelm Ansorge, Svante Pääbo posted to affymetrix chimpanzee cross-species human sara by ptrobajo on 2008-05-08 15:12:41 as along with 1 person daveGerrard
	Identification of distinct molecular phenotypes in acute megakaryoblastic leukemia by gene expression profiling [My Copy] Proceedings of the National Academy of Sciences, Vol. 103, No. 9. (28 February 2006), pp. 3339-3344. by Jean-Pierre Bourquin, Aravind Subramanian, Claudia Langebrake, et al.Dirk Reinhardt, Olivier Bernard, Paola Ballerini, Andre Baruchel, Helene Cave, Nicole Dastugue, Henrik Hasle, Gertjan L. Kaspers, Michel Lessard, Lucienne Michaux, Paresh Vyas, Elisabeth van Wering, Christian M. Zwaan, Todd R. Golub, Stuart H. Orkin posted to cross-species gsea human mouse by ptrobajo on 2008-04-05 22:31:41 as
	Novel insights into the relationships between dendritic cell subsets in human and mouse revealed by genome-wide expression profiling [My Copy] Genome Biology, Vol. 9 (24 January 2008), R17. by Scott H. Robbins, Thierry Walzer, Doulaye Dembele, et al.Christelle Thibault, Axel Defays, Gilles Bessou, Huichun Xu, Eric Vivier, Maclean Sellars, Philippe Pierre, Franck R. Sharp, Susan Chan, Philippe Kastner, Marc Dalod posted to cross-species expression gene human immunology mouse by ptrobajo on 2008-04-04 22:26:29 as

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histone	1
hmm	1
hnf	1
hub	1
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identifier	1
imaging	1
inbred_strains	1
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insulin_resistance	1
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intrinsic	1
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item	1
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measure	1
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