raiyar's network [48 articles] Export

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	Mapping Gene Associations in Human Mitochondria using Clinical Disease Phenotypes [My Copy] PLoS Comput Biol, Vol. 5, No. 4. (24 April 2009), e1000374. by Curt Scharfe, Henry H. Lu, Jutta K. Neuenburg, et al.Edward A. Allen, Guan-Cheng Li, Thomas Klopstock, Tina M. Cowan, Gregory M. Enns, Ronald W. Davis posted to disease interaction mitochondria network phenotype prediction by raiyar on 2009-06-03 13:13:34 as along with 2 people ptrobajo guhjy
	A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology [My Copy] Nat Biotech, Vol. 26, No. 10. (09 October 2008), pp. 1155-1160. by Markus J. Herrgard, Neil Swainston, Paul Dobson, et al.Warwick B. Dunn, Yalcin K. Arga, Mikko Arvas, Nils Buthgen, Simon Borger, Roeland Costenoble, Matthias Heinemann, Michael Hucka, Nicolas Le Novere, Peter Li, Wolfram Liebermeister, Monica L. Mo, Ana P. Oliveira, Dina Petranovic, Stephen Pettifer, Evangelos Simeonidis, Kieran Smallbone, Irena Spasie, Dieter Weichart, Roger Brent, David S. Broomhead, Hans V. Westerhoff, Betul Kurdar, Merja Penttila, Edda Klipp, Bernhard O. Palsson, Uwe Sauer, Stephen G. Oliver, Pedro Mendes, Jens Nielsen, Douglas B. Kell posted to metabolic network resource systems yeast by raiyar on 2009-05-10 16:12:38 as along with 22 people and 2 groups m_j pmendes windman83 jfr neilswainston irenas JeremyZucker chasmand schwartzjmc pinney pauldobson alaninmcr allysonlister zwang guhjy dbk michaelbarton ptrobajo neils dullhunk pengchy tmmurali MetabolicModeling BergmanLab
	A network solution [My Copy] Nature, Vol. 455, No. 7214. (October 2008), pp. 730-731. by Adriano Henney, Giulio Superti-Furga posted to interest medicine network review systems by raiyar on 2008-12-16 14:05:16 as along with 4 people Yanno reyez alexknight dullhunk
	Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 43. (28 October 2008), pp. 16653-16658. by Scott J. Dixon, Yaroslav Fedyshyn, Judice L. Y. Koh, et al.T. S. Keshava Prasad, Charly Chahwan, Gordon Chua, Kiana Toufighi, Anastasija Baryshnikova, Jacqueline Hayles, Kwang-Lae Hoe, Dong-Uk Kim, Han-Oh Park, Chad L. Myers, Akhilesh Pandey, Daniel Durocher, Brenda J. Andrews, Charles Boone posted to evolution fg2008 ht interaction network sl yeast by raiyar on 2008-12-16 13:59:00 as along with 4 people sp20040 biomcgary robfsouza bpcusack
	Identifying transcription factor functions and targets by phenotypic activation. [My Copy] Proc Natl Acad Sci U S A, Vol. 103, No. 32. (8 August 2006), pp. 12045-12050. by G. Chua, Q. D. Morris, R. Sopko, et al.M. D. Robinson, O. Ryan, E. T. Chan, B. J. Frey, B. J. Andrews, C. Boone, T. R. Hughes posted to expression motif network regulation tf transcription yeast by raiyar on 2008-11-06 10:41:59 as along with 4 people and 1 group siebert indigoviolet koller hplatero EisenLab
	Structure and function of a transcriptional network activated by the MAPK Hog1. [My Copy] Nature genetics (19 October 2008) by Andrew P P. Capaldi, Tommy Kaplan, Ying Liu, et al.Naomi Habib, Aviv Regev, Nir Friedman, Erin K K. O'Shea posted to analysis example model network projmt regulation yeast by raiyar on 2008-11-03 16:54:00 as along with 4 people roys jbhiatt renatomilani tmmurali
	Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. [My Copy] Cell, Vol. 115, No. 5. (26 November 2003), pp. 629-640. by V. K. Mootha, J. Bunkenborg, J. V. Olsen, et al.M. Hjerrild, J. R. Wisniewski, E. Stahl, M. S. Bolouri, H. N. Ray, S. Sihag, M. Kamal, N. Patterson, E. S. Lander, M. Mann posted to disease expression integration methodspaper mitochondria mouse network proteomics regulation by raiyar on 2008-10-01 13:09:33 as
	Identification of mitochondrial disease genes through integrative analysis of multiple datasets [My Copy] Methods, Vol. 46, No. 4. (December 2008), pp. 248-255. by Raeka S. Aiyar, Julien Gagneur, Lars M. Steinmetz edited by Gerald Shadel posted to analysis basis disease human integration methodspaper mitochondria network parts-list prediction review statistics systems tac2 by raiyar on 2008-09-22 22:47:52 as
	Evolutionary Rate in the Protein Interaction Network [My Copy] Science, Vol. 296, No. 5568. (26 April 2002), pp. 750-752. by Hunter B. Fraser, Aaron E. Hirsh, Lars M. Steinmetz, Curt Scharfe, Marcus W. Feldman posted to evolution ht interaction network proteomics yeast by raiyar on 2008-09-05 13:35:21 as along with 10 people pablocarb mgomes qluo renewang marcio dragonrez bjorns timflutre tale friendpine
	Capturing cellular machines by systematic screens of protein complexes. [My Copy] Trends Microbiol, Vol. 14, No. 8. (August 2006), pp. 336-339. by J. Gagneur, L. David, L. M. Steinmetz posted to analysis ht integration interaction network proteomics yeast by raiyar on 2008-09-05 13:33:03 as along with 1 person nm
	Combining guilt-by-association and guilt-by-profiling to predict Saccharomyces cerevisiae gene function. [My Copy] Genome biology, Vol. 9 Suppl 1 (2008) by W. Tian, L. V. Zhang, M. Taşan, et al.F. D. Gibbons, O. D. King, J. Park, Z. Wunderlich, J. M. Cherry, F. P. Roth posted to genomics integration methodspaper network prediction tool yeast ym2008 by raiyar on 2008-09-05 13:04:56 as
	Drug Target Identification Using Side-Effect Similarity [My Copy] Science, Vol. 321, No. 5886. (11 July 2008), pp. 263-266. by Monica Campillos, Michael Kuhn, Anne-Claude Gavin, Lars J. Jensen, Peer Bork posted to analysis chemgen compound example genomics ht interaction network prediction target by raiyar on 2008-08-11 16:21:27 as along with 17 people anthropomorphism npt11tpn mitko mingzhi TRHvidsten dullhunk jfr zimbo1 bpcusack jmuhlich aheilbut larsjuhljensen tmmurali askrajiv reyez roys ajaymalik
	Systematic pathway analysis using high-resolution fitness profiling of combinatorial gene deletions [My Copy] Nat Genet, Vol. 39, No. 2. (07 January 2007), pp. 199-206. by Robert P. St Onge, Ramamurthy Mani, Julia Oh, et al.Michael Proctor, Eula Fung, Ronald W. Davis, Corey Nislow, Frederick P. Roth, Guri Giaever posted to analysis chemgen deletion genomics haploinsufficiency ht network pathway systems yeast by raiyar on 2008-08-11 16:05:28 as along with 8 people gwenknight nzm ajbattle aalibes tmmurali wnpx Ao_Li2007 gwcarter
	Moving toward a system genetics view of disease. [My Copy] Mamm Genome (26 July 2007) by Solveig K. Sieberts, Eric E. Schadt posted to expression genetic network qtl review statistics systems by raiyar on 2008-06-23 15:14:34 as along with 7 people and 2 groups flbarroso daforerog roys guhjy dchughes jo_davies lp2 G4ID Genetics-of-Gambling
	Walking the interactome for prioritization of candidate disease genes. [My Copy] American journal of human genetics, Vol. 82, No. 4. (April 2008), pp. 949-958. by Sebastian Köhler, Sebastian Bauer, Denise Horn, Peter N. Robinson posted to disease genetic interaction methodspaper network prediction by raiyar on 2008-06-23 15:12:21 as along with 6 people daforerog saket jfr kluck daed guhjy
	Protein networks in disease. [My Copy] Genome research, Vol. 18, No. 4. (1 April 2008), pp. 644-652. by Trey Ideker, Roded Sharan posted to disease ellstalk methodspaper network personalgenomics prediction proteomics by raiyar on 2008-06-19 15:46:55 as along with 27 people shikin carlk isimpson chica saket zufar kaarsinogen giovenko guhjy balicea tmmurali Borelli jwdietrich frohike bootsy nedwards roys mclarenv phoenixzxl brianb schuylrp jfr paolomarcatili gracio thomaskelder ptrobajo zwang
	Global Mapping of the Yeast Genetic Interaction Network [My Copy] Science, Vol. 303, No. 5659. (6 February 2004), pp. 808-813. by Amy H. Tong, Guillaume Lesage, Gary D. Bader, et al.Huiming Ding, Hong Xu, Xiaofeng Xin, James Young, Gabriel F. Berriz, Renee L. Brost, Michael Chang, YiQun Chen, Xin Cheng, Gordon Chua, Helena Friesen, Debra S. Goldberg, Jennifer Haynes, Christine Humphries, Grace He, Shamiza Hussein, Lizhu Ke, Nevan Krogan, Zhijian Li, Joshua N. Levinson, Hong Lu, Patrice Menard, Christella Munyana, Ainslie B. Parsons, Owen Ryan, Raffi Tonikian, Tania Roberts, Anne-Marie Sdicu, Jesse Shapiro, Bilal Sheikh, Bernhard Suter, Sharyl L. Wong, Lan V. Zhang, Hongwei Zhu, Christopher G. Burd, Sean Munro, Chris Sander, Jasper Rine, Jack Greenblatt, Matthias Peter, Anthony Bretscher, Graham Bell, Frederick P. Roth, Grant W. Brown, Brenda Andrews, Howard Bussey, Charles Boone posted to basis deletion genetic genomics interaction methodspaper network yeast by raiyar on 2008-04-21 22:13:09 as along with 30 people and 2 groups kentz colmryan meanerelk rdowell TheresaNiederberger dakelley kinop nzm roys ajbattle czeller ldfu pcahan1 lfriedl lyongu luispedro opheliav tabu Chue nirfriedman nickluscombe koller patrycjam patrycja_missiuro jiny chasmand tresch Takayuki ksiek carlk kdl EBI-regulation
	Guilt by association: contextual information in genome analysis. [My Copy] Genome Res, Vol. 10, No. 8. (August 2000), pp. 1074-1077. by L. Aravind posted to genomics interaction methodspaper network by raiyar on 2008-04-21 22:04:14 as along with 3 people and 1 group ujh lfriedl bluto kdl
	Variations in DNA elucidate molecular networks that cause disease. [My Copy] Nature, Vol. 452, No. 7186. (27 March 2008), pp. 429-435. by Yanqing Chen, Jun Zhu, Pek Yee Y. Lum, et al.Xia Yang, Shirly Pinto, Douglas J. MacNeil, Chunsheng Zhang, John Lamb, Stephen Edwards, Solveig K. Sieberts, Amy Leonardson, Lawrence W. Castellini, Susanna Wang, Marie-France F. Champy, Bin Zhang, Valur Emilsson, Sudheer Doss, Anatole Ghazalpour, Steve Horvath, Thomas A. Drake, Aldons J. Lusis, Eric E. Schadt posted to disease expression genetic human methodspaper model network qtl systems by raiyar on 2008-04-15 13:10:34 as along with 22 people and 2 groups mnishimu Zephyrus biomcgary daforerog roys druvus nicklynch semrich brianb jbsaltz djkt lp2 jo_davies shikin caseybrown ptrobajo guhjy echinotrix natstreet sanchezbuelna jfr chrisamiller 4th_floor_JC GeneGo
	A predictive model for transcriptional control of physiology in a free living cell. [My Copy] Cell, Vol. 131, No. 7. (28 December 2007), pp. 1354-1365. by Richard Bonneau, Marc T. Facciotti, David J. Reiss, et al.Amy K. Schmid, Min Pan, Amardeep Kaur, Vesteinn Thorsson, Paul Shannon, Michael H. Johnson, J. Christopher Bare, William Longabaugh, Madhavi Vuthoori, Kenia Whitehead, Aviv Madar, Lena Suzuki, Tetsuya Mori, Dong-Eun E. Chang, Jocelyne Diruggiero, Carl H. Johnson, Leroy Hood, Nitin S. Baliga posted to methodspaper model network prediction by raiyar on 2008-04-11 17:03:14 as along with 11 people ptrobajo adampah lawraga edwardmorrissey guhjy tmmurali oelemento emptyhb megraw roys Borelli
	Broad network-based predictability of Saccharomyces cerevisiae gene loss-of-function phenotypes. [My Copy] Genome biology, Vol. 8, No. 12. (2007) by Kriston L. McGary, Insuk Lee, Edward M. Marcotte posted to bioinformatics complex_trait disease genomics methodspaper model mutant network prediction yeast by raiyar on 2008-02-18 11:01:55 as along with 6 people benjaminsb jiny cjeans biomcgary barriot entropy
	Gene network inference via structural equation modeling in genetical genomics experiments. [My Copy] Genetics, Vol. 178, No. 3. (3 March 2008), pp. 1763-1776. by B. Liu, A. de la Fuente, I. Hoeschele posted to bioinformatics expression model network qtl regulation statistics yeast by raiyar on 2008-02-06 11:39:14 as along with 8 people and 1 group roys Scis0000002 orzenil dpollard xingxu caseybrown smgomez guhjy EisenLab
	Consolidating the set of known human protein-protein interactions in preparation for large-scale mapping of the human interactome [My Copy] Genome Biology, Vol. 6, No. 5. (2005), R40. by Arun Ramani, Razvan Bunescu, Raymond Mooney, Edward Marcotte posted to bioinformatics human interaction methodspaper network prediction textmining by raiyar on 2008-01-28 13:58:50 as along with 19 people and 5 groups fesousa ggallone yaredo setar tmmurali dragonrez okarsligil lfriedl ccots balajis maryee brant opheliav davidandrzej wnpx rlhsiao bundschu mikaelhuss grahamc Complex Networks Jarman Lab kdl Bioinformatics generif_paper
	An improved map of conserved regulatory sites for Saccharomyces cerevisiae [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (7 March 2006), 113. by Kenzie Macisaac, Ting Wang, D. Benjamin Gordon, David Gifford, Gary Stormo, Ernest Fraenkel posted to analysis bioinformatics network regulation sgtcnih yeast by raiyar on 2008-01-16 19:19:26 as along with 9 people roys idonaldson tuck eckart_bindewald cconboy lusk nklee barwil kristallreiner
	Reverse engineering of regulatory networks in human B cells. [My Copy] Nat Genet (20 March 2005) by Katia Basso, Adam A A. Margolin, Gustavo Stolovitzky, Ulf Klein, Riccardo Dalla-Favera, Andrea Califano posted to human interaction network prediction regulation by raiyar on 2007-12-19 21:17:46 as along with 12 people Neeperando akraemer verdicchio ggallone snuppepuppan kentsis dragonrez jfr wnpx naegele heliopais lylu
	Gaining confidence in high-throughput protein interaction networks. [My Copy] Nature biotechnology, Vol. 22, No. 1. (January 2004), pp. 78-85. by Joel S. Bader, Amitabha Chaudhuri, Jonathan M. Rothberg, John Chant posted to ht interaction methodspaper network proteomics by raiyar on 2007-12-19 21:13:44 as along with 16 people and 1 group carlk chica anf dakelley lawraga wenhui ocs dragonrez lfriedl gurkanbebek cjeans iris_2001 patrycjam patrycja_missiuro Evangelia ellakat kdl
	Disease gene discovery through integrative genomics. [My Copy] Annu Rev Genomics Hum Genet, Vol. 6 (2005), pp. 381-406. by C. Giallourakis, C. Henson, M. Reich, X. Xie, V. K. Mootha posted to complex_trait disease genetic genomics integration mendelian methodspaper network by raiyar on 2007-11-16 13:10:04 as along with 2 people daforerog jo_davies
	Reconstruction of a functional human gene network, with an application for prioritizing positional candidate genes. [My Copy] American journal of human genetics, Vol. 78, No. 6. (June 2006), pp. 1011-1025. by L. Franke, H. van Bakel, L. Fokkens, E. D. de Jong, M. Egmont-Petersen, C. Wijmenga posted to bioinformatics disease genomics human interaction methodspaper network parts-list prediction by raiyar on 2007-11-16 13:04:02 as along with 10 people and 1 group eesruiz saket agonzale jfr snuppepuppan guhjy lfriedl tabu samal mmt kdl
	Genetical genomics analysis of a yeast segregant population for transcription network inference. [My Copy] Genetics, Vol. 170, No. 2. (June 2005), pp. 533-542. by N. Bing, I. Hoeschele posted to expression network qtl regulation tacqa yeast by raiyar on 2007-08-14 21:36:24 as along with 2 people and 1 group natstreet caseybrown steinmetzlab
	Network analysis of FDA approved drugs and their targets. [My Copy] The Mount Sinai journal of medicine, New York, Vol. 74, No. 1. (April 2007), pp. 27-32. by Avi Ma'ayan, Sherry L. Jenkins, Joseph Goldfarb, Ravi Iyengar posted to analysis bioinformatics compound network by raiyar on 2007-06-27 07:18:07 as along with 2 people and 1 group egonw guhjy steinmetzlab
	Evaluation of predicted network modules in yeast metabolism using NMR-based metabolite profiling. [My Copy] Genome Res, Vol. 17, No. 4. (April 2007), pp. 510-519. by J. G. Bundy, B. Papp, R. Harmston, et al.R. A. Browne, E. M. Clayson, N. Burton, R. J. Reece, S. G. Oliver, K. M. Brindle posted to bioinformatics deletion metabolic_profiling methodspaper model network prediction technique yeast by raiyar on 2007-06-08 09:33:01 as along with 2 people and 1 group fishtank alexg steinmetzlab
	The human disease network [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 21. (22 May 2007), pp. 8685-8690. by Kwang-Il Goh, Michael E. Cusick, David Valle, Barton Childs, Marc Vidal, Albert-LÃ¡szlÃ³ BarabÃ¡si posted to analysis bioinformatics disease genomics integration methodspaper network statistics systems by raiyar on 2007-05-27 00:38:43 as along with 39 people and 9 groups robfsouza bertelsen smichan biomcgary pawelsobko CurAbility Scis0000002 qluo cbforrest daforerog nedwards Dulcinea saket kaarsinogen roys Yanno guhjy aalibes cannin kuhn jfr yas balicea neveaire bundschu grahamc joepickrell leSyl henning dejori xingxu winterschlaefer naegele shoshin shikin nolodie mingzhi carlk yaredo Network Analysis of Genes Regulated in Renal Diseases Biostatistics Computational-Genomics Bioinformatics Neuroscience steinmetzlab ic4 generif_paper GomezLab
	Integrated Genomic and Proteomic Analyses of a Systematically Perturbed Metabolic Network [My Copy] Science, Vol. 292, No. 5518. (4 May 2001), pp. 929-934. by Trey Ideker, Vesteinn Thorsson, Jeffrey A. Ranish, et al.Rowan Christmas, Jeremy Buhler, Jimmy K. Eng, Roger Bumgarner, David R. Goodlett, Ruedi Aebersold, Leroy Hood posted to analysis array bioinformatics deletion expression genomics integration methodspaper model network proteomics systems yeast by raiyar on 2007-05-26 18:25:14 as along with 14 people and 3 groups pmendes myzhang rsaito isimpson snuppepuppan BioGeek dragonrez bpb okarsligil opheliav wnpx gurkanbebek thomaskelder shikin Bioinformatics steinmetzlab GeneGo
	Systems biology, metabolic modelling and metabolomics in drug discovery and development. [My Copy] Drug discovery today, Vol. 11, No. 23-24. (December 2006), pp. 1085-1092. by Douglas B. Kell posted to genomics metabolic metabolic_profiling methodspaper model network prediction review systems by raiyar on 2007-05-02 12:44:16 as along with 13 people and 2 groups peterli flbarroso schwartzjmc egonw irenas nicklynch alexg dullhunk mhucka fishtank shikin alanrw gemmalholliday steinmetzlab GeneGo
	Evidence for the presence of disease-perturbed networks in prostate cancer cells by genomic and proteomic analyses: a systems approach to disease. [My Copy] Cancer Res, Vol. 65, No. 8. (15 April 2005), pp. 3081-3091. by B. Lin, J. T. White, W. Lu, et al.T. Xie, A. G. Utleg, X. Yan, E. C. Yi, P. Shannon, I. Khrebtukova, P. H. Lange, D. R. Goodlett, D. Zhou, T. J. Vasicek, L. Hood posted to analysis disease ellstalk example genomics ht methodspaper network personalgenomics systems by raiyar on 2007-04-29 11:20:26 as along with 2 people and 1 group ipark-kaist megraw steinmetzlab
	Multiple high-throughput analyses monitor the response of E. coli to perturbations. [My Copy] Science (New York, N.Y.), Vol. 316, No. 5824. (27 April 2007), pp. 593-597. by Nobuyoshi Ishii, Kenji Nakahigashi, Tomoya Baba, et al.Martin Robert, Tomoyoshi Soga, Akio Kanai, Takashi Hirasawa, Miki Naba, Kenta Hirai, Aminul Hoque, Pei Yee Y. Ho, Yuji Kakazu, Kaori Sugawara, Saori Igarashi, Satoshi Harada, Takeshi Masuda, Naoyuki Sugiyama, Takashi Togashi, Miki Hasegawa, Yuki Takai, Katsuyuki Yugi, Kazuharu Arakawa, Nayuta Iwata, Yoshihiro Toya, Yoichi Nakayama, Takaaki Nishioka, Kazuyuki Shimizu, Hirotada Mori, Masaru Tomita posted to defect flux ht metabolic_profiling mutant network systems by raiyar on 2007-04-27 13:34:19 as along with 8 people and 1 group JeremyZucker ynaito cgaugain thomaskelder jjray dylan77 ytoya IgorG steinmetzlab
	Systems Biology Toolbox for MATLAB: a computational platform for research in systems biology [My Copy] Bioinformatics, Vol. 22, No. 4. (15 February 2006), pp. 514-515. by Henning Schmidt, Mats Jirstrand posted to bioinformatics model network systems technique by raiyar on 2007-04-26 09:40:20 as along with 3 people and 2 groups joseph_x_zhou julius jrbanga SysbioMPI-TCells steinmetzlab
	Bringing metabolic networks to life: integration of kinetic, metabolic, and proteomic data [My Copy] Theoretical Biology and Medical Modelling, Vol. 3 (15 December 2006), 42. by Wolfram Liebermeister, Edda Klipp posted to bioinformatics flux metabolic methodspaper model network prediction statistics systems technique by raiyar on 2007-04-23 16:54:29 as along with 5 people and 1 group lflorez guhjy wnpx fishtank jrbanga steinmetzlab
	Dynamic modelling and analysis of biochemical networks: mechanism-based models and model-based experiments. [My Copy] Briefings in bioinformatics, Vol. 7, No. 4. (1 December 2006), pp. 364-374. by Natal A. van Riel posted to bioinformatics metabolic model network prediction review systems technique by raiyar on 2007-04-23 15:48:44 as along with 4 people and 1 group bertelsen abhishek_tiwari wnpx fishtank steinmetzlab
	Multiple knockout analysis of genetic robustness in the yeast metabolic network [My Copy] Nature Genetics, Vol. 38, No. 9. (29 August 2006), pp. 993-998. by David Deutscher, Isaac Meilijson, Martin Kupiec, Eytan Ruppin posted to metabolic model mutant network yeast by raiyar on 2007-04-03 16:35:12 as along with 9 people and 1 group shung nzm tmmurali koller cjeans patrycja_missiuro edwardmorrissey hryk jiny steinmetzlab
	Uncovering transcriptional regulation of metabolism by using metabolic network topology [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 8. (22 February 2005), pp. 2685-2689. by Kiran R. Patil, Jens Nielsen posted to bioinformatics metabolic model network regulation transcription by raiyar on 2007-03-22 12:52:55 as along with 2 people and 1 group kukki alexg steinmetzlab
	Systems analysis of energy metabolism elucidates the affected respiratory chain complex in Leigh's syndrome [My Copy] Molecular Genetics and Metabolism, Vol. 91, No. 1. (May 2007), pp. 15-22. by Thuy D. Vo, Paul, Bernhard O. Palsson posted to bioinformatics disease metabolic methodspaper model network systems by raiyar on 2007-03-21 12:53:19 as along with 1 group steinmetzlab
	Metabolic flux balance analysis and the in silico analysis of Escherichia coli K-12 gene deletions [My Copy] BMC Bioinformatics, Vol. 1, No. 1. (2000), pp. 1-1. by Jeremy S. Edwards, Bernhard O. Palsson posted to parts-list network mutant model genes flux deletion bioinformatics analysis by raiyar on 2007-01-25 11:29:42 as along with 2 people and 2 groups winterstream icases steinmetzlab TNT
	Integrating high-throughput and computational data elucidates bacterial networks. [My Copy] Nature, Vol. 429, No. 6987. (6 May 2004), pp. 92-96. by M. W. Covert, E. M. Knight, J. L. Reed, M. J. Herrgard, B. O. Palsson posted to ht model network regulation sgtcnih systems by raiyar on 2007-01-25 10:42:56 as along with 6 people and 2 groups Retchless lfriedl RMGraze alexg JeremyZucker srp33 kdl steinmetzlab
	Metabolic modeling of microbial strains in silico. [My Copy] Trends Biochem Sci, Vol. 26, No. 3. (March 2001), pp. 179-186. by M. W. Covert, C. H. Schilling, I. Famili, et al.J. S. Edwards, I. I. Goryanin, E. Selkov, B. O. Palsson posted to systems review network model metabolic integration flux bioinformatics by raiyar on 2007-01-24 17:05:10 as along with 2 people and 2 groups peterli icases steinmetzlab TNT
	Candidate metabolic network states in human mitochondria. Impact of diabetes, ischemia, and diet. [My Copy] J Biol Chem, Vol. 280, No. 12. (25 March 2005), pp. 11683-11695. by I. Thiele, N. D. Price, T. D. Vo, B. Ø. Palsson posted to network model mitochondria metabolic human flux disease by raiyar on 2007-01-24 17:00:01 as along with 1 group steinmetzlab
	Integrated analysis of regulatory and metabolic networks reveals novel regulatory mechanisms in Saccharomyces cerevisiae. [My Copy] Genome Res, Vol. 16, No. 5. (May 2006), pp. 627-635. by M. J. Herrgård, B. S. Lee, V. Portnoy, B. Ø. Palsson posted to metabolic methodspaper model network regulation sgtcnih transcription yeast by raiyar on 2007-01-08 15:19:42 as along with 8 people and 3 groups michaelbarton JeremyZucker nickluscombe aswin kengg koller cjeans edwardmorrissey EBI-regulation steinmetzlab Plantandetc
	Assessing Systems Properties of Yeast Mitochondria through an Interaction Map of the Organelle [My Copy] PLoS Genetics, Vol. 2, No. 10. (20 October 2006), e170. by Fabiana Perocchi, Lars J. Jensen, Julien Gagneur, et al.Uwe Ahting, Christian von Mering, Peer Bork, Holger Prokisch, Lars M. Steinmetz edited by Stuart K. Kim posted to disease genes human integration interaction methodspaper mitochondria network parts-list sgtcnih systems tac2 yeast by raiyar on 2006-12-28 02:04:28 as along with 1 group steinmetzlab

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mitochondria	161
methodspaper	121
yeast	115
review	90
disease	81
genomics	68
human	54
mtdna	49
network	48
projmt	47
analysis	43
bioinformatics	43
systems	40
genetic	39
prediction	39
basis	38
mutant	38
ht	37
technique	35
integration	34
model	32
localization	31
mitotarget	29
parts-list	28
example	26
interaction	25
proteomics	25
regulation	24
respiration	24
deletion	22
expression	22
metabolic	22
sgtcnih	20
compound	19
interest	19
qtl	19
tool	16
transcription	16
allotopic	15
statistics	14
array	13
atp6	13
goodref	13
litrev	13
personalgenomics	13
complex_trait	12
defect	12
evolution	12
projnarp	12
ros	12
db	11
projmicr	11
ellstalk	10
morphology	10
chemgen	9
mouse	9
drosophila	8
flux	8
metabolic_profiling	8
narp	8
variant	8
genes	7
im	7
mtknockout	7
rescue	7
target	7
aging	6
chlamydomonas	6
medicine	6
tac2	6
atp8	5
barcode	5
cancer	5
ms	5
textmining	5
complex	4
mendelian	4
pharmacogen	4
population	4
ym2008	4
cox2	3
cox3	3
dhla	3
future	3
haploinsufficiency	3
methodspaper2	3
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petite	3
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tiling	3
ts	3
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tap	2
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motif	1
pathway	1
quantitative	1
rec	1
recombination	1
resource	1
sl	1
tf	1
toxin	1
translation	1
vector	1
yjm789	1

raiyar's network [48 articles] Export

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