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	Hypertension genetics, single nucleotide polymorphisms, and the common disease:common variant hypothesis. [My Copy] Hypertension, Vol. 39, No. 2 Pt 2. (February 2002), pp. 323-331. by P. A. Doris posted to association_studies by ramensky on 2007-02-24 02:21:40 as
	Characterization of Compensated Mutations in Terms of Structural and Physico-Chemical Properties. [My Copy] J Mol Biol (26 September 2006) by Carles Ferrer-Costa, Modesto Orozco, Xavier de la D. Cruz posted to cpds by ramensky on 2007-01-09 20:12:48 as along with 3 people and 2 groups caporaso cat_worth cjeans structural_bioinformatics biomedical-nlp
	Highly consistent patterns for inherited human diseases at the molecular level [My Copy] Bioinformatics, Vol. 22, No. 3. (1 February 2006), pp. 269-277. by Nuria Lopez-Bigas, Benjamin J. Blencowe, Christos A. Ouzounis posted to association_studies nssnps by ramensky on 2007-10-19 17:17:09 as along with 2 people daforerog cmzmasek
	Predicting the Effects of Amino Acid Substitutions on Protein Function [My Copy] Annual Review of Genomics and Human Genetics, Vol. 7, No. 1. (9 August 2006), pp. 61-80. by Pauline C. Ng, Steven Henikoff posted to nssnps by ramensky on 2007-07-19 17:07:38 as along with 8 people and 2 groups djkt daforerog Einat caporaso hdopazo massivemayhem cat_worth lpfernandes structural_bioinformatics biomedical-nlp
	Common variation in three genes, including a noncoding variant in CFH, strongly influences risk of age-related macular degeneration [My Copy] Nature Genetics, Vol. 38, No. 9. (27 August 2006), pp. 1055-1059. by Julian Maller, Sarah George, Shaun Purcell, et al.Jes Fagerness, David Altshuler, Mark J. Daly, Johanna M. Seddon posted to association_studies by ramensky on 2007-07-11 09:01:07 as along with 1 person jasonbobe
	Most rare missense alleles are deleterious in humans: implications for complex disease and association studies. [My Copy] Am J Hum Genet, Vol. 80, No. 4. (April 2007), pp. 727-739. by G. V. Kryukov, L. A. Pennacchio, S. R. Sunyaev posted to association_studies nssnps by ramensky on 2007-05-28 20:39:53 as along with 2 people caseybrown daforerog
	Medical sequencing at the extremes of human body mass. [My Copy] Am J Hum Genet, Vol. 80, No. 4. (April 2007), pp. 779-791. by N. Ahituv, N. Kavaslar, W. Schackwitz, et al.A. Ustaszewska, J. Martin, S. Hebert, H. Doelle, B. Ersoy, G. Kryukov, S. Schmidt, N. Yosef, E. Ruppin, R. Sharan, C. Vaisse, S. Sunyaev, R. Dent, J. Cohen, R. McPherson, L. A. Pennacchio posted to association_studies nssnps by ramensky on 2007-05-28 20:39:10 as along with 3 people daforerog balicea lp2
	Pervasive compensatory adaptation in Escherichia coli. [My Copy] Proc Biol Sci, Vol. 267, No. 1442. (7 March 2000), pp. 515-522. by F. B. Moore, D. E. Rozen, R. E. Lenski posted to adaptation by ramensky on 2007-05-22 19:50:32 as
	The coupon collector and the suppressor mutation: estimating the number of compensatory mutations by maximum likelihood. [My Copy] Genetics, Vol. 170, No. 3. (July 2005), pp. 1323-1332. by A. Poon, B. H. Davis, L. Chao posted to cpds by ramensky on 2007-05-22 19:39:10 as
	The Role of Compensatory Mutations in the Emergence of Drug Resistance. [My Copy] PLoS Comput Biol, Vol. 2, No. 10. (13 October 2006) by Andreas Handel, Roland R R. Regoes, Rustom Antia posted to adaptation by ramensky on 2007-04-08 00:46:55 as along with 1 person and 1 group caporaso biomedical-nlp
	Ranks of genuine associations in whole-genome scans. [My Copy] Genetics, Vol. 171, No. 2. (October 2005), pp. 813-823. by D. V. Zaykin, L. A. Zhivotovsky posted to association_studies by ramensky on 2007-02-24 02:45:48 as along with 1 person jbsaltz
	Predicting the insurgence of human genetic diseases associated to single point protein mutations with support vector machines and evolutionary information. [My Copy] Bioinformatics (7 August 2006) by E Capriotti, R Calabrese, R Casadio posted to nssnps by ramensky on 2007-02-24 02:18:57 as along with 3 people and 1 group daforerog chad_davis kevinemamy clab
	Direct estimation of per nucleotide and genomic deleterious mutation rates in Drosophila. [My Copy] Nature, Vol. 445, No. 7123. (4 January 2007), pp. 82-85. by Cathy Haag-Liautard, Mark Dorris, Xulio Maside, et al.Steven Macaskill, Daniel L. Halligan, David Houle, Brian Charlesworth, Peter D. Keightley posted to evolution nssnps by ramensky on 2007-05-22 19:16:05 as along with 7 people and 1 group daveGerrard operon dpollard jri stajich lusk gjuggler EisenLab
	Relating Three-Dimensional Structures to Protein Networks Provides Evolutionary Insights [My Copy] Science, Vol. 314, No. 5807. (22 December 2006), pp. 1938-1941. by Philip M. Kim, Long J. Lu, Yu Xia, Mark B. Gerstein posted to protein-protein by ramensky on 2007-03-27 23:44:02 as along with 24 people and 2 groups daveGerrard ucbcjbm pablocarb mgomes rsaito MatthiasReimann cerca bicko lfriedl chad_davis Einat tny choonpeng timflutre grahamc massivemayhem efge lpfernandes cdeane Pao-Yang phoenixzxl carlk paolomarcatili saket structural_bioinformatics kdl
	Structural characterisation and functional significance of transient protein-protein interactions. [My Copy] Journal of molecular biology, Vol. 325, No. 5. (31 January 2003), pp. 991-1018. by I. M. Nooren, J. M. Thornton posted to protein-protein by ramensky on 2007-03-27 23:37:06 as along with 5 people chica chad_davis drastic higueruelo marti
	Selection of SNP subsets for association studies in candidate genes: comparison of the power of different strategies to detect single disease susceptibility locus effects. [My Copy] BMC Genet, Vol. 7 (2006) by E. Cousin, J. F. Deleuze, E. Genin posted to association_studies by ramensky on 2007-02-24 02:36:55 as
	Correlated mutations: Advances and limitations. A study on fusion proteins and on the Cohesin-Dockerin families [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 63, No. 4. (1 June 2006), pp. 832-845. by Inbal Halperin, Haim Wolfson, Ruth Nussinov posted to cpds by ramensky on 2007-02-24 02:16:31 as along with 11 people dfdong mgomes qluo RebeccaHamer bicko gbart cjeans tale mingzhi friendpine Lombardo_7
	Positive and negative feedback regulates the transcription factor FOXL2 in response to cell stress: evidence for a regulatory imbalance induced by disease-causing mutations. [My Copy] Human molecular genetics, Vol. 18, No. 4. (15 February 2009), pp. 632-644. by B. A. Benayoun, F. Batista, J. Auer, et al.A. Dipietromaria, D. L'Hôte, E. De Baere, R. A. Veitia posted to gain_of_function by ramensky on 2009-03-30 18:24:37 as
	Exploring the molecular etiology of dominant-negative mutations. [My Copy] The Plant cell, Vol. 19, No. 12. (December 2007), pp. 3843-3851. by R. A. Veitia posted to gain_of_function by ramensky on 2009-03-30 18:24:24 as along with 2 people guhjy bpcusack
	Exploring the etiology of haploinsufficiency. [My Copy] BioEssays : news and reviews in molecular, cellular and developmental biology, Vol. 24, No. 2. (February 2002), pp. 175-184. by Reiner A. Veitia posted to gain_of_function by ramensky on 2009-03-30 18:24:11 as along with 2 people sbottani bpcusack
	Finding genes that underlie complex traits. [My Copy] Science, Vol. 298, No. 5602. (20 December 2002), pp. 2345-2349. by A. M. Glazier, J. H. Nadeau, T. J. Aitman posted to education haplotypes nssnps population_genetics by ramensky on 2009-03-30 15:56:28 as along with 4 people ekostem dbensasson fisherp lp2
	SNP Function Portal: a web database for exploring the function implication of SNP alleles. [My Copy] Bioinformatics (Oxford, England), Vol. 22, No. 14. (15 July 2006) by Pinglang Wang, Manhong Dai, Weijian Xuan, et al.Richard C. McEachin, Anne U. Jackson, Laura J. Scott, Brian Athey, Stanley J. Watson, Fan Meng posted to nssnps by ramensky on 2009-03-29 14:06:23 as along with 2 people oelemento guhjy
	Predicting the oncogenicity of missense mutations reported in the International Agency for Cancer Research (IARC) mutation database on p53. [My Copy] Human mutation, Vol. 26, No. 5. (November 2005), pp. 446-454. by I. P. Gorlov, O. Y. Gorlova, C. I. Amos posted to cancer by ramensky on 2009-02-09 12:39:42 as
	Clustering and its application in multi-target prediction. [My Copy] Current opinion in drug discovery & development, Vol. 12, No. 1. (January 2009), pp. 98-107. by William Liu, Dale E. Johnson posted to drug_design by ramensky on 2009-01-27 12:18:00 as along with 1 person misonneh
	Network pharmacology: the next paradigm in drug discovery [My Copy] Nat Chem Biol, Vol. 4, No. 11. (November 2008), pp. 682-690. by Andrew L. Hopkins posted to drug_design selective_binding targets by ramensky on 2008-11-19 15:37:40 as along with 7 people flbarroso michaelbarton sg45653 richardbickerton Yanno bicko jerome
	Targeted polypharmacology: discovery of dual inhibitors of tyrosine and phosphoinositide kinases. [My Copy] Nature chemical biology, Vol. 4, No. 11. (12 November 2008), pp. 691-699. by Beth Apsel, Jimmy A. Blair, Beatriz Gonzalez, et al.Tamim M. Nazif, Morri E. Feldman, Brian Aizenstein, Randy Hoffman, Roger L. Williams, Kevan M. Shokat, Zachary A. Knight posted to drug_design selective_binding by ramensky on 2008-11-19 15:36:48 as along with 3 people fernan guhjy richardbickerton
	Kinase-likeness and kinase-privileged fragments: toward virtual polypharmacology. [My Copy] Journal of medicinal chemistry, Vol. 51, No. 5. (13 March 2008), pp. 1214-1222. by A. M. Aronov, B. McClain, C. S. Moody, M. A. Murcko posted to drug_design selective_binding by ramensky on 2008-11-19 15:35:42 as along with 1 person sschurer
	How many modes of action should an antibiotic have? [My Copy] Current Opinion in Pharmacology, Vol. 8, No. 5. (October 2008), pp. 564-573. by H. Brotzoesterhelt, N. Brunner posted to drug_design selective_binding targets by ramensky on 2008-11-19 15:32:45 as along with 1 person zimbo1
	Kinomics-structural biology and chemogenomics of kinase inhibitors and targets. [My Copy] Biochim Biophys Acta, Vol. 1697, No. 1-2. (11 March 2004), pp. 243-257. by M. Vieth, R. E. Higgs, D. H. Robertson, M. Shapiro, E. A. Gragg, H. Hemmerle posted to drug_design selective_binding by ramensky on 2008-11-19 15:30:57 as along with 1 person tjimenez
	Global mapping of pharmacological space [My Copy] Nature Biotechnology, Vol. 24, No. 7. (13 July 2006), pp. 805-815. by Gaia V. Paolini, Richard H. B. Shapland, Willem P. van Hoorn, Jonathan S. Mason, Andrew L. Hopkins posted to drug_design targets by ramensky on 2008-11-19 15:26:26 as along with 12 people and 1 group bertelsen sameersoi superpyrin richardbickerton Yanno BragilMassoud guhjy kuhn bicko caporaso allmensch jerome_ucsf_slb biomedical-nlp
	Nanobacteria: Facts or Fancies? [My Copy] PLoS Pathog, Vol. 3, No. 5. (25 May 2007), e55. by Pasquale Urbano, Francesco Urbano posted to misc by ramensky on 2008-11-18 12:17:53 as
	Drug-target network. [My Copy] Nature biotechnology, Vol. 25, No. 10. (October 2007), pp. 1119-1126. by Muhammed A. Yildirim, Kwang-Il I. Goh, Michael E. Cusick, Albert-László L. Barabási, Marc Vidal posted to drug_design drug_similarity targets by ramensky on 2008-11-17 23:20:01 as along with 15 people and 1 group antonkratz daforerog richardbickerton ptrobajo Yanno guhjy cannin jfr julius grahamc cjeans zwang dejori mingzhi jerome_ucsf_slb libr
	Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sites [My Copy] Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i105-111. by Rafael Najmanovich, Natalja Kurbatova, Janet Thornton posted to 3d drug_design by ramensky on 2008-11-15 21:03:31 as along with 7 people iaolier krapnik apaydin tjimenez neils reyez nickolay
	Reaching for high-hanging fruit in drug discovery at protein–protein interfaces [My Copy] Nature, Vol. 450, No. 7172. (12 December 2007), pp. 1001-1009. by James A. Wells, Christopher L. Mcclendon posted to drug_design protein-protein by ramensky on 2008-11-15 20:59:44 as along with 8 people semin allmensch cjeans chgjb phoenixzxl higueruelo bicko guhjy
	Signs of positive selection of somatic mutations in human cancers detected by EST sequence analysis. [My Copy] BMC cancer, Vol. 6 (2006) by V. N. Babenko, M. K. Basu, F. A. Kondrashov, I. B. Rogozin, E. V. Koonin posted to adaptation cancer evolution by ramensky on 2008-11-10 14:27:49 as
	Protein-ligand docking: Current status and future challenges [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 65, No. 1. (21 July 2006), pp. 15-26. by Sérgio F. Sousa, Pedro A. Fernandes, Maria J. Ramos posted to drug_design by ramensky on 2008-11-01 18:58:08 as along with 11 people and 2 groups rabio flbarroso BragilMassoud yongzhao peprovy kazemi sergio_fms carlescorbi robert boris_aguilar qaiser_fatmi TSRI_MGL Chang group
	Combinatorial patterns of somatic gene mutations in cancer [My Copy] FASEB J., Vol. 22, No. 8. (1 August 2008), pp. 2605-2622. by Chen-Hsiang Yeang, Frank Mccormick, Arnold Levine posted to cancer by ramensky on 2008-10-05 17:15:25 as along with 3 people myzhang srp33 jfr
	Intragenic Dominant Suppressors of glp-1, a Gene Essential for Cell-Signaling in Caenorhabditis elegans, Support a Role for cdc10/SW16/Ankyrin Motifs in GLP-1 Function [My Copy] Genetics, Vol. 135, No. 4. (1 December 1993), pp. 1023-1034. by J. L. Lissemore, P. D. Currie, C. M. Turk, E. M. Maine posted to cpds by ramensky on 2008-09-13 14:47:54 as along with 2 people and 1 group thegoose2 tharris C. elegans / WormBase
	Genetic suppression. [My Copy] WormBook : the online review of C. elegans biology (2005), pp. 1-13. by J. Hodgkin posted to cpds by ramensky on 2008-09-13 14:32:12 as along with 2 people and 1 group thegoose2 tharris C. elegans / WormBase
	New method for fast and accurate binding-site identification and analysis. [My Copy] Chemical biology & drug design, Vol. 69, No. 2. (February 2007), pp. 146-148. by T. Halgren posted to drug_design by ramensky on 2008-09-12 17:41:29 as along with 1 person LamBras
	A detailed comparison of current docking and scoring methods on systems of pharmaceutical relevance. [My Copy] Proteins, Vol. 56, No. 2. (1 August 2004), pp. 235-249. by E. Perola, W. P. Walters, P. S. Charifson posted to drug_design validation by ramensky on 2008-09-04 15:38:13 as along with 5 people and 3 groups oteri BragilMassoud yongzhao marcius schlauchi TSRI_MGL BioinfoCIPF SGU-CIPF
	On evaluating molecular-docking methods for pose prediction and enrichment factors. [My Copy] J Chem Inf Model, Vol. 46, No. 1. (b 2006), pp. 401-415. by H. Chen, P. D. Lyne, F. Giordanetto, T. Lovell, J. Li posted to drug_design validation by ramensky on 2008-09-04 15:37:27 as along with 1 person BragilMassoud
	Method for comparing the structures of protein ligand-binding sites and application for predicting protein-drug interactions [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2008), NA. by Ryoichi Minai, Yo Matsuo, Hiroyuki Onuki, Hiroshi Hirota posted to drug_design by ramensky on 2008-09-03 17:49:55 as along with 6 people reyez tjimenez massivemayhem jteyra mingzhi higueruelo
	Side-chain flexibility in protein-ligand binding: the minimal rotation hypothesis. [My Copy] Protein science : a publication of the Protein Society, Vol. 14, No. 4. (April 2005), pp. 1104-1114. by M. I. Zavodszky, L. A. Kuhn posted to drug_design by ramensky on 2008-09-03 17:46:24 as along with 9 people and 2 groups fl BragilMassoud dgruiz yongzhao nknii blackbart kazemi rsantana LamBras TCR_Signaling TSRI_MGL
	Compensatory Mutation Partially Restores Fitness and Delays Reversion of Escape Mutation within the Immunodominant HLA-B5703-Restricted Gag Epitope in Chronic Human Immunodeficiency Virus Type 1 Infection [My Copy] J. Virol.*, Vol. 81, No. 15. (1 August 2007), pp. 8346-8351. by Hayley Crawford, Julia G. Prado, Alasdair Leslie, et al.Stephane Hue, Isobella Honeyborne, Sharon Reddy, Mary van der Stok, Zenele Mncube, Christian Brander, Christine Rousseau, James I. Mullins, Richard Kaslow, Paul Goepfert, Susan Allen, Eric Hunter, Joseph Mulenga, Photini Kiepiela, Bruce D. Walker, Philip J. Goulder posted to adaptation cpds by ramensky on 2008-08-31 14:50:00 as
	In silico whole-genome scanning of cancer-associated nonsynonymous SNPs and molecular characterization of a dynein light chain tumour variant [My Copy] Oncogene, Vol. aop, No. current. by Abdel Aouacheria, Vincent Navratil, Wenyu Wen, et al.Ming Jiang, Dominique Mouchiroud, Christian Gautier, Manolo Gouy, Mingjie Zhang, Mingjie Zhang posted to cancer nssnps by ramensky on 2008-08-31 14:32:24 as along with 1 person Ayest
	Prediction of Cancer Driver Mutations in Protein Kinases [My Copy] Cancer Res, Vol. 68, No. 6. (15 March 2008), pp. 1675-1682. by Ali Torkamani, Nicholas J. Schork posted to cancer by ramensky on 2008-08-23 14:10:08 as
	Query3d: a new method for high-throughput analysis of functional residues in protein structures. [My Copy] BMC bioinformatics, Vol. 6 Suppl 4 (1 December 2005) by Gabriele Ausiello, Allegra Via, Manuela Helmer-Citterich posted to 3d by ramensky on 2008-08-14 18:46:54 as along with 1 person HawkinsJohnC
	LigASite--a database of biologically relevant binding sites in proteins with known apo-structures. [My Copy] Nucleic acids research, Vol. 36, No. Database issue. (January 2008) by Benoit H. Dessailly, Marc F. Lensink, Christine A. Orengo, Shoshana J. Wodak posted to 3d drug_design by ramensky on 2008-08-13 16:10:58 as along with 1 person and 1 group bdessailly Orengo Group Journal Picks
	Prospects for identifying functional variation across the genome. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102 Suppl 1 (3 May 2005), pp. 6614-6621. by S. J. Macdonald, A. D. Long posted to rsnps by ramensky on 2008-08-03 15:56:41 as along with 1 person jbsaltz

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