rdiaz's cnv [136 articles] Export

Recent papers added to rdiaz's library classified by the tag cnv. You can also see everyone's cnv.

	Oncogene Mutations, Copy Number Gains and Mutant Allele Specific Imbalance (MASI) Frequently Occur Together in Tumor Cells [My Copy] PLoS ONE, Vol. 4, No. 10. (14 October 2009), e7464. by Junichi Soh, Naoki Okumura, William W. Lockwood, et al.Hiromasa Yamamoto, Hisayuki Shigematsu, Wei Zhang, Raj Chari, David S. Shames, Ximing Tang, Calum MacAulay, Marileila Varella-Garcia, Tõnu Vooder, Ignacio I. Wistuba, Stephen Lam, Rolf Brekken, Shinichi Toyooka, John D. Minna, Wan L. Lam, Adi F. Gazdar posted to tumor metastasis integration cnv by rdiaz on 2009-10-15 18:29:34 as
	Integrated Analysis of Copy Number Alterations and Gene Expression: A Bivariate Assessment of Equally Directed Abnormalities [My Copy] Bioinformatics (14 October 2009), btp592. by Martin Schafer, Holger Schwender, Sylvia Merk, Claudia Haferlach, Katja Ickstadt, Martin Dugas posted to integration expression cnv cgh by rdiaz on 2009-10-15 16:56:24 as
	Recurrent copy number alterations in BRCA1-mutated ovarian tumors alter biological pathways. [My Copy] Human mutation (2 October 2009) by Karin Leunen, Olivier Gevaert, Anneleen Daemen, et al.Vanessa Vanspauwen, Geneviève Michils, Bart De Moor, Philippe Moerman, Ignace Vergote, Eric Legius posted to recurrent method hmm example cnv acgh by rdiaz on 2009-10-09 10:06:13 as along with 1 person frohike
	Origins and functional impact of copy number variation in the human genome [My Copy] Nature, Vol. advance online publication (07 October 2009) by Donald F. Conrad, Dalila Pinto, Richard Redon, et al.Lars Feuk, Omer Gokcumen, Yujun Zhang, Jan Aerts, T. Daniel Andrews, Chris Barnes, Peter Campbell, Tomas Fitzgerald, Min Hu, Chun H. Ihm, Kati Kristiansson, Daniel G. MacArthur, Jeffrey R. MacDonald, Ifejinelo Onyiah, Andy W. Pang, Sam Robson, Kathy Stirrups, Armand Valsesia, Klaudia Walter, John Wei, Chris Tyler-Smith, Nigel P. Carter, Charles Lee, Stephen W. Scherer, Matthew E. Hurles posted to review disease cnv by rdiaz on 2009-10-08 10:46:25 as along with 18 people and 1 group vplagnol biovils psique chvlyl daed daforerog zufar jessopher DrRichardBadge operon colinveal frohike sf11 sameersoi polivares dswan qayub bpcusack Journal picks
	Human genetics: Sharp focus on the variable genome [My Copy] Nature, Vol. 461, No. 7265. (07 October 2009), pp. 735-736. by John A. L. Armour posted to variation teaching review cnv catalogue by rdiaz on 2009-10-08 10:43:04 as along with 4 people josepe bpcusack carolep merpublic
	Detection of recurrent copy number alterations in the genome: taking among-subject heterogeneity seriously [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (23 September 2009), 308. by Oscar Rueda, Ramon D. Uriarte posted to recurrent common cnv cgh acgh by rdiaz on 2009-10-01 11:10:47 as along with 1 person frohike
	Identification of Copy Number Variants Defining Genomic Differences among Major Human Groups [My Copy] PLoS ONE, Vol. 4, No. 9. (30 September 2009), e7230. by Lluís Armengol, Sergi Villatoro, Juan R. González, et al.Lorena Pantano, Manel García-Aragonés, Raquel Rabionet, Mario Cáceres, Xavier Estivill posted to variation population cnv by rdiaz on 2009-10-01 09:57:24 as
	Genomic profiling distinguishes familial multiple and sporadic multiple meningiomas [My Copy] BMC Medical Genomics, Vol. 2, No. 1. (2009), 42. by Yiping Shen, Fabio Nunes, Anat S. Rachamimov, et al.Marianne James, Gayatry Mohapatra, Scott Plotkin, Rebecca Betensky, David Engler, Jennifer Roy, Vijaya Ramesh, James Gusella posted to regions instability common cnv classification chromosomal cgh acgh by rdiaz on 2009-10-01 09:26:22 as
	Elucidating the genetic architecture of familial schizophrenia using rare copy number variant and linkage scans. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 39. (29 September 2009), pp. 16746-16751. by Bin Xu, Abigail Woodroffe, Laura Rodriguez-Murillo, et al.J. Louw Roos, Elizabeth J. van Rensburg, Gonçalo R. Abecasis, Joseph A. Gogos, Maria Karayiorgou posted to teaching recurrent rare inheritance example cnv by rdiaz on 2009-09-30 11:49:02 as along with 1 person daforerog
	Genetic Structures of Copy Number Variants Revealed by Genotyping Single Sperm [My Copy] PLoS ONE, Vol. 4, No. 4. (22 April 2009), e5236. by Minjie Luo, Xiangfeng Cui, David Fredman, et al.Anthony J. Brookes, Marco A. Azaro, Danielle M. Greenawalt, Guohong Hu, Hui-Yun Wang, Irina V. Tereshchenko, Yong Lin, Yue Shentu, Richeng Gao, Li Shen, Honghua Li posted to sperm haplotype database cnv by rdiaz on 2009-09-29 18:39:47 as along with 1 person sameersoi
	Genetic Alterations and Oncogenic Pathways Associated with Breast Cancer Subtypes [My Copy] Molecular Cancer Research, Vol. 7, No. 4. (April 2009), pp. 511-522. by Xiaolan Hu, Howard M. Stern, Lin Ge, et al.Carol O'Brien, Lauren Haydu, Cynthia D. Honchell, Peter M. Haverty, Brock A. Peters, Thomas D. Wu, Lukas C. Amler, John Chant, David Stokoe, Mark R. Lackner, Guy Cavet posted to example cnv cancer by rdiaz on 2009-09-29 17:00:43 as along with 2 people jfr Zephyrus
	Molecular classification of solid tumours: towards pathway-driven therapeutics. [My Copy] British journal of cancer, Vol. 100, No. 10. (19 May 2009), pp. 1517-1522. by C. Swanton, C. Caldas posted to teaching review cnv classification cancer by rdiaz on 2009-09-29 16:03:15 as along with 5 people jfr tonamswish guhjy xtizon giovenko
	Analysis of DNA copy number alterations in ovarian serous tumors identifies new molecular genetic changes in low-grade and high-grade carcinomas. [My Copy] Cancer research, Vol. 69, No. 9. (1 May 2009), pp. 4036-4042. by Kuan-Ting T. Kuo, Bin Guan, Yuanjian Feng, et al.Tsui-Lien L. Mao, Xu Chen, Natini Jinawath, Yue Wang, Robert J. Kurman, Ie-Ming e. M. Shih, Tian-Li L. Wang posted to instability example cnv classification chromosomal by rdiaz on 2009-09-29 10:40:57 as
	A Latent Class Model with Hidden Markov Dependence for Array CGH Data. [My Copy] Biometrics, Vol. 9999, No. 9999. (7 April 2009) by Stacia M. Desantis, E. Andrés Houseman, Brent A. Coull, David N. Louis, Gayatry Mohapatra, Rebecca A. Betensky posted to hmm cnv classification cgh acgh by rdiaz on 2009-09-28 17:26:48 as along with 1 person kdpreter
	Identification of interactive networks of gene expression associated with osteosarcoma oncogenesis by integrated molecular profiling [My Copy] Hum. Mol. Genet., Vol. 18, No. 11. (1 June 2009), pp. 1962-1975. by Bekim Sadikovic, Maisa Yoshimoto, Susan Chilton-MacNeill, Paul Thorner, Jeremy A. Squire, Maria Zielenska posted to network methylation integration expression epigenomics cnv by rdiaz on 2009-09-28 16:48:08 as
	Chromosomal instability and copy number alterations in Barrett's esophagus and esophageal adenocarcinoma. [My Copy] Clinical cancer research : an official journal of the American Association for Cancer Research, Vol. 15, No. 10. (15 May 2009), pp. 3305-3314. by Thomas G. Paulson, Carlo C. Maley, Xiaohong Li, et al.Hongzhe Li, Carissa A. Sanchez, Dennis L. Chao, Robert D. Odze, Thomas L. Vaughan, Patricia L. Blount, Brian J. Reid posted to recurrent instability cnv cna chromosomal by rdiaz on 2009-09-28 16:06:13 as
	High-resolution analysis of copy number alterations and associated expression changes in ovarian tumors. [My Copy] BMC medical genomics, Vol. 2 (2009) by Peter M. Haverty, Lawrence S. Hon, Joshua S. Kaminker, John Chant, Zemin Zhang posted to region recurrent integration expression common cnv by rdiaz on 2009-09-28 16:05:00 as along with 1 person daed
	Challenges for CNV interpretation in clinical molecular karyotyping: Lessons learned from a 1001 sample experience. [My Copy] European journal of medical genetics (15 September 2009) by Karen Buysse, Barbara Delle D. Chiaie, Rudy Van Coster, et al.Bart Loeys, Anne De Paepe, Geert Mortier, Frank Speleman, Björn Menten posted to review interpretation cnv causality by rdiaz on 2009-09-25 13:30:02 as
	Segmentation and Estimation for SNP Microarrays: A Bayesian Multiple Change-Point Approach. [My Copy] Biometrics (17 September 2009) by Yu Chuan C. Tai, Mark N. Kvale, John S. Witte posted to snp region recurrent common cnv bayesian by rdiaz on 2009-09-25 13:27:31 as along with 1 person shikin
	Patterns of Gene Expression and Copy-Number Alterations in von-Hippel Lindau Disease-Associated and Sporadic Clear Cell Carcinoma of the Kidney [My Copy] Cancer Res, Vol. 69, No. 11. (1 June 2009), pp. 4674-4681. by Rameen Beroukhim, Jean-Philippe Brunet, Arianna Di Napoli, et al.Kirsten D. Mertz, Apryle Seeley, Maira M. Pires, David Linhart, Robert A. Worrell, Holger Moch, Mark A. Rubin, William R. Sellers, Matthew Meyerson, W. Marston Linehan, William G. Kaelin, Sabina Signoretti posted to integration expression example cnv by rdiaz on 2009-09-23 17:38:34 as
	Autism genome-wide copy number variation reveals ubiquitin and neuronal genes. [My Copy] Nature, Vol. 459, No. 7246. (28 May 2009), pp. 569-573. by Joseph T. Glessner, Kai Wang, Guiqing Cai, et al.Olena Korvatska, Cecilia E. Kim, Shawn Wood, Haitao Zhang, Annette Estes, Camille W. Brune, Jonathan P. Bradfield, Marcin Imielinski, Edward C. Frackelton, Jennifer Reichert, Emily L. Crawford, Jeffrey Munson, Patrick M. Sleiman, Rosetta Chiavacci, Kiran Annaiah, Kelly Thomas, Cuiping Hou, Wendy Glaberson, James Flory, Frederick Otieno, Maria Garris, Latha Soorya, Lambertus Klei, Joseph Piven, Kacie J. Meyer, Evdokia Anagnostou, Takeshi Sakurai, Rachel M. Game, Danielle S. Rudd, Danielle Zurawiecki, Christopher J. McDougle, Lea K. Davis, Judith Miller, David J. Posey, Shana Michaels, Alexander Kolevzon, Jeremy M. Silverman, Raphael Bernier, Susan E. Levy, Robert T. Schultz, Geraldine Dawson, Thomas Owley, William M. McMahon, Thomas H. Wassink, John A. Sweeney, John I. Nurnberger, Hilary Coon, James S. Sutcliffe, Nancy J. Minshew, Struan F. Grant, Maja Bucan, Edwin H. Cook, Joseph D. Buxbaum, Bernie Devlin, Gerard D. Schellenberg, Hakon Hakonarson posted to teaching snp region example common cnv autism by rdiaz on 2009-09-23 17:25:29 as along with 8 people daforerog pkonings fenghezi scjparker dswan neils jbhiatt psique
	Integrative clustering of multiple genomic data types using a joint latent variable model with application to breast and lung cancer subtype analysis [My Copy] Bioinformatics, Vol. 25, No. 22. (15 November 2009), pp. 2906-2912. by Ronglai Shen, Adam B. Olshen, Marc Ladanyi posted to integrative integration expression cnv cluster cgh by rdiaz on 2009-09-17 11:19:37 as along with 1 person dswan
	Gene-Network Analysis Identifies Susceptibility Genes Related to Glycobiology in Autism [My Copy] PLoS ONE, Vol. 4, No. 5. (28 May 2009), e5324. by Bert van der Zwaag, Lude Franke, Martin Poot, et al.Ron Hochstenbach, Henk A. Spierenburg, Jacob A. S. Vorstman, Emma van Daalen, Maretha V. de Jonge, Nienke E. Verbeek, Eva H. Brilstra, Ruben van 't Slot, Roel A. Ophoff, Michael A. van Es, Hylke M. Blauw, Jan H. Veldink, Jacobine E. Buizer-Voskamp, Frits A. Beemer, Leonard H. van den Berg, Cisca Wijmenga, Hans K. van Amstel, Herman van Engeland, Burbach, Wouter G. Staal posted to reconstruction network cnv by rdiaz on 2009-09-15 18:01:00 as along with 2 people daed daforerog
	A geometric approach for classification and comparison of structural variants. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 12. (15 June 2009), pp. i222-230. by Suzanne Sindi, Elena Helman, Ali Bashir, Benjamin J. Raphael posted to recurrent number copy cnv classification by rdiaz on 2009-09-15 17:59:11 as along with 5 people and 1 group dakelley operon jonilaserson APRegier AlexBateman Journal picks
	Extensions of sparse canonical correlation analysis with applications to genomic data. [My Copy] Statistical applications in genetics and molecular biology, Vol. 8, No. 1. (2009) by Daniela M. Witten, Robert J. Tibshirani posted to snp integration expression coexpression cnv by rdiaz on 2009-09-15 16:55:10 as
	Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes [My Copy] Genome Research, Vol. 19, No. 7. (15 July 2009), pp. 1270-1278. by Fereydoun Hormozdiari, Can Alkan, Evan E. Eichler, S. Cenk Sahinalp posted to sequencing cnv by rdiaz on 2009-09-09 17:52:30 as along with 16 people n00c aezrin jandot GustavoLacerda guhjy jessopher megraw jonilaserson chrisamiller dandaman sameersoi djkt dakelley APRegier natstreet druvus
	Integrated study of copy number states and genotype calls using high-density SNP arrays [My Copy] Nucl. Acids Res., Vol. 37, No. 16. (1 September 2009), pp. 5365-5377. by Wei Sun, Fred A. Wright, Zhengzheng Tang, et al.Silje H. Nordgard, Peter V. Loo, Tianwei Yu, Vessela N. Kristensen, Charles M. Perou posted to snp integration cnv by rdiaz on 2009-09-09 16:28:41 as along with 1 person and 1 group daed Journal picks
	Copy-number variation: the end of the human genome? [My Copy] Trends in biotechnology, Vol. 27, No. 8. (01 August 2009), pp. 448-454. by Paul H. Dear posted to technology review cnv by rdiaz on 2009-09-09 16:27:59 as along with 2 people pkonings VGreiff
	A network model of a cooperative genetic landscape in brain tumors. [My Copy] JAMA : the journal of the American Medical Association, Vol. 302, No. 3. (15 July 2009), pp. 261-275. by Markus Bredel, Denise M. Scholtens, Griffith R. Harsh, et al.Claudia Bredel, James P. Chandler, Jaclyn J. Renfrow, Ajay K. Yadav, Hannes Vogel, Adrienne C. Scheck, Robert Tibshirani, Branimir I. Sikic posted to network landscape expression cnv cgh by rdiaz on 2009-09-09 12:58:51 as along with 3 people srp33 burak daforerog
	DNA copy number aberrations in breast cancer by array comparative genomic hybridization. [My Copy] Genomics, proteomics & bioinformatics / Beijing Genomics Institute, Vol. 7, No. 1-2. (June 2009), pp. 13-24. by Jian Li, Kai Wang, Shengting Li, et al.Vera Timmermans-Wielenga, Fritz Rank, Carsten Wiuf, Xiuqing Zhang, Huanming Yang, Lars Bolund posted to example cnv cancer by rdiaz on 2009-09-09 12:56:34 as
	Finding exclusively deleted or amplified genomic areas in lung adenocarcinomas using a novel chromosomal pattern analysis [My Copy] BMC Medical Genomics, Vol. 2, No. 1. (2009), 43. by Philippe Broet, Patrick Tan, Marco Alifano, Sophie C. Broet, Sylvia Richardson posted to recurrent number copy common cnv clustering by rdiaz on 2009-09-09 12:51:52 as
	Comparing CNV detection methods for SNP arrays [My Copy] Brief Funct Genomic Proteomic, Vol. 8, No. 5. (8 September 2009), pp. elp017-366. by Laura Winchester, Christopher Yau, Jiannis Ragoussis posted to snp review comparison cnv by rdiaz on 2009-09-08 16:40:37 as along with 2 people daed jsatkosk
	De novo copy number variants identify new genes and loci in isolated sporadic tetralogy of Fallot. [My Copy] Nature genetics, Vol. 41, No. 8. (August 2009), pp. 931-935. by Steven C. Greenway, Alexandre C. Pereira, Jennifer C. Lin, et al.Steven R. DePalma, Samuel J. Israel, Sonia M. Mesquita, Emel Ergul, Jessie H. Conta, Joshua M. Korn, Steven A. McCarroll, Joshua M. Gorham, Stacey Gabriel, David M. Altshuler, Maria de Lourdes d. e. . L. Quintanilla-Dieck, Maria Alexandra A. Artunduaga, Roland D. Eavey, Robert M. Plenge, Nancy A. Shadick, Michael E. Weinblatt, Philip L. De Jager, David A. Hafler, Roger E. Breitbart, Jonathan G. Seidman, Christine E. Seidman posted to snp de_novo cnv by rdiaz on 2009-09-08 12:47:47 as along with 1 person misonneh
	An integrative genomic and transcriptomic analysis reveals molecular pathways and networks regulated by copy number aberrations in basal-like, HER2 and luminal cancers. [My Copy] Breast cancer research and treatment (18 August 2009) by Rachael Natrajan, Britta Weigelt, Alan Mackay, et al.Felipe C. Geyer, Anita Grigoriadis, David S. Tan, Chris Jones, Christopher J. Lord, Radost Vatcheva, Socorro M. Rodriguez-Pinilla, Jose Palacios, Alan Ashworth, Jorge S. Reis-Filho posted to expression example cnv by rdiaz on 2009-09-08 12:05:13 as
	Identification of significant regional genetic variations using continuous CNV values in aCGH data. [My Copy] Genomics (19 August 2009) by Ki-Yeol Y. Kim, Gui Youn Y. Lee, Jin Kim, Hei-Cheul C. Jeung, Hyun Cheol C. Chung, Sun Young Y. Rha posted to statistics region recurrent common cnv cgh anova by rdiaz on 2009-09-07 14:57:47 as along with 1 person pkonings
	Correlating gene and protein expression data using Correlated Factor Analysis [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (01 September 2009), 272. by Chuen S. Tan, Agus Salim, Alexander Ploner, Janne Lehtio, Kee S. Chia, Yudi Pawitan posted to proteomics integration expression cnv by rdiaz on 2009-09-07 11:48:59 as along with 4 people mayercd ptrobajo coffeerv phoenixzxl
	Copy Number Variation in Human Health, Disease, and Evolution [My Copy] Annual Review of Genomics and Human Genetics, Vol. 10, No. 1. (2009), pp. 451-481. by Feng Zhang, Wenli Gu, Matthew E. Hurles, James R. Lupski posted to review cnv cgh by rdiaz on 2009-09-03 14:01:38 as along with 2 people sf11 scmelton
	Personalized copy number and segmental duplication maps using next-generation sequencing [My Copy] Nat Genet, Vol. 41, No. 10. (30 August 2009), pp. 1061-1067. by Can Alkan, Jeffrey M. Kidd, Tomas Marques-Bonet, et al.Gozde Aksay, Francesca Antonacci, Fereydoun Hormozdiari, Jacob O. Kitzman, Carl Baker, Maika Malig, Onur Mutlu, S. Cenk Sahinalp, Richard A. Gibbs, Evan E. Eichler posted to sequencing cnv cgh acgh by rdiaz on 2009-09-03 14:01:24 as along with 28 people and 1 group leemachado daed gbenson n00c bozdagd dakelley sbmontgomery eshirdel merpublic shyamsg scmelton qayub natstreet fenghezi Annab djkt nuin xingxu jamesmorris brant torfinnnome jandot pkonings danmaclean daforerog frohike rschulz gangcai Journal picks
	Hidden Markov models for the assessment of chromosomal alterations using high-throughput SNP arrays. [My Copy] The annals of applied statistics, Vol. 2, No. 2. (1 June 2008), pp. 687-713. by Robert B. Scharpf, Giovanni Parmigiani, Jonathan Pevsner, Ingo Ruczinski posted to snp hmm cnv cgh by rdiaz on 2009-08-18 19:35:04 as
	High-resolution genomic profiling of childhood T-ALL reveals frequent copy-number alterations affecting the TGF-beta and PI3K-AKT pathways and deletions at 6q15-16.1 as a genomic marker for unfavorable early treatment response [My Copy] Blood, Vol. 114, No. 5. (30 July 2009), pp. 1053-1062. by Marc Remke, Stefan Pfister, Corinne Kox, et al.Grischa Toedt, Natalia Becker, Axel Benner, Wiebke Werft, Stephen Breit, Shuangyou Liu, Felix Engel, Andrea Wittmann, Martin Zimmermann, Martin Stanulla, Martin Schrappe, Wolf-Dieter Ludwig, Claus R. Bartram, Bernhard Radlwimmer, Martina U. Muckenthaler, Peter Lichter, Andreas E. Kulozik posted to sam prediction cnv classification by rdiaz on 2009-08-18 17:42:24 as
	Integrating sequencing technologies in personal genomics: optimal low cost reconstruction of structural variants. [My Copy] PLoS computational biology, Vol. 5, No. 7. (10 July 2009), e1000432. by Jiang Du, Robert D. Bjornson, Zhengdong D. Zhang, Yong Kong, Michael Snyder, Mark B. Gerstein posted to sequencing cnv cgh by rdiaz on 2009-08-18 17:38:11 as along with 5 people operon nuin natstreet dakelley guhjy
	Copy number variation influences gene expression and metabolic traits in mice. [My Copy] Human molecular genetics (31 July 2009), ddp360. by Luz D. Orozco, Shawn J. Cokus, Anatole Ghazalpour, et al.Leslie Ingram-Drake, Susanna Wang, Atila van Nas, Nam Che, Jesus A. Araujo, Matteo Pellegrini, Aldons J. Lusis posted to integration expression cnv causality by rdiaz on 2009-08-18 16:57:59 as along with 2 people memerman pkonings
	Prognostic Significance of Copy-Number Alterations in Multiple Myeloma [My Copy] J Clin Oncol, Vol. 27, No. 27. (20 September 2009), pp. 4585-4590. by Herve Avet-Loiseau, Cheng Li, Florence Magrangeas, et al.Wilfried Gouraud, Catherine Charbonnel, Jean-Luc Harousseau, Michel Attal, Gerald Marit, Claire Mathiot, Thierry Facon, Philippe Moreau, Kenneth C. Anderson, Loic Campion, Nikhil C. Munshi, Stephane Minvielle posted to survival example covariable cnv by rdiaz on 2009-08-18 16:52:46 as
	Acquired copy number alterations in adult acute myeloid leukemia genomes [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 31. (4 August 2009), pp. 12950-12955. by Matthew J. Walter, Jacqueline E. Payton, Rhonda E. Ries, et al.William D. Shannon, Hrishikesh Deshmukh, Yu Zhao, Jack Baty, Sharon Heath, Peter Westervelt, Mark A. Watson, Michael H. Tomasson, Rakesh Nagarajan, Brian P. O'Gara, Clara D. Bloomfield, Krzysztof Mrózek, Rebecca R. Selzer, Todd A. Richmond, Jacob Kitzman, Joel Geoghegan, Peggy S. Eis, Rachel Maupin, Robert S. Fulton, Michael Mclellan, Richard K. Wilson, Elaine R. Mardis, Daniel C. Link, Timothy A. Graubert, John F. Dipersio, Timothy J. Ley posted to region recurrent integration expression cnv by rdiaz on 2009-08-18 16:17:34 as along with 1 person frohike
	High-resolution mapping and analysis of copy number variations in the human genome: A data resource for clinical and research applications [My Copy] Genome Research, Vol. 19, No. 9. (10 September 2009), pp. 1682-1690. by Tamim H. Shaikh, Xiaowu Gai, Juan C. Perin, et al.Joseph T. Glessner, Hongbo Xie, Kevin Murphy, Ryan O'Hara, Tracy Casalunovo, Laura K. Conlin, Monica D'Arcy, Edward C. Frackelton, Elizabeth A. Geiger, Chad Haldeman-Englert, Marcin Imielinski, Cecilia E. Kim, Livija Medne, Kiran Annaiah, Jonathan P. Bradfield, Elvira Dabaghyan, Andrew Eckert, Chioma C. Onyiah, Svetlana Ostapenko, F. George Otieno, Erin Santa, Julie L. Shaner, Robert Skraban, Ryan M. Smith, Josephine Elia, Elizabeth Goldmuntz, Nancy B. Spinner, Elaine H. Zackai, Rosetta M. Chiavacci, Robert Grundmeier, Eric F. Rappaport, Struan F. A. Grant, Peter S. White, Hakon Hakonarson posted to review region recurrent database data common cnv by rdiaz on 2009-08-18 14:45:49 as along with 7 people pkonings ericrpaquet jandot guhjy frohike vplagnol daforerog
	Sensitive and accurate detection of copy number variants using read depth of coverage [My Copy] Genome Research, Vol. 19, No. 9. (5 September 2009), pp. 1586-1592. by Seungtai Yoon, Zhenyu Xuan, Vladimir Makarov, Kenny Ye, Jonathan Sebat posted to software sequencing sequence method cnv acgh by rdiaz on 2009-08-18 14:42:04 as along with 7 people woodson8 scmelton torfinnnome dakelley n00c jbhiatt pkonings
	SnoopCGH: software for visualizing comparative genomic hybridization data [My Copy] Bioinformatics, Vol. 25, No. 20. (15 October 2009), pp. 2732-2733. by Jacob Almagro-Garcia, Magnus Manske, Celine Carret, et al.Susana Campino, Sarah Auburn, Bronwyn L. MacInnis, Gareth Maslen, Arnab Pain, Christopher I. Newbold, Dominic P. Kwiatkowski, Taane G. Clark posted to software cnv cgh by rdiaz on 2009-08-18 11:48:59 as along with 3 people and 1 group nuin jandot pkonings Journal picks
	Jointly analyzing gene expression and copy number data in breast cancer using data reduction models. [My Copy] IEEE/ACM transactions on computational biology and bioinformatics / IEEE, ACM, Vol. 3, No. 1. (January 2006), pp. 2-16. by John A. Berger, Sampsa Hautaniemi, Sanjit K. Mitra, Jaakko Astola posted to cnv expression integration by rdiaz on 2009-07-30 16:49:54 as along with 1 person aviad_work
	QuantiSNP: an Objective Bayes Hidden-Markov Model to detect and accurately map copy number variation using SNP genotyping data. [My Copy] Nucleic Acids Res (27 March 2007) by Stefano Colella, Christopher Yau, Jennifer M M. Taylor, et al.Ghazala Mirza, Helen Butler, Penny Clouston, Anne S S. Bassett, Anneke Seller, Christopher C C. Holmes, Jiannis Ragoussis posted to cnv hmm recurrent region snp by rdiaz on 2009-07-24 16:38:29 as along with 6 people and 2 groups qfwills druvus waszak psique caldavis jfr parkinson's disease references Bioinformatics
	Genome-wide detection of human copy number variations using high-density DNA oligonucleotide arrays. [My Copy] Genome research, Vol. 16, No. 12. (1 December 2006), pp. 1575-1584. by Daisuke Komura, Fan Shen, Shumpei Ishikawa, et al.Karen R. Fitch, Wenwei Chen, Jane Zhang, Guoying Liu, Sigeo Ihara, Hiroshi Nakamura, Matthew E. Hurles, Charles Lee, Stephen W. Scherer, Keith W. Jones, Michael H. Shapero, Jing Huang, Hiroyuki Aburatani posted to cnv recurrent region by rdiaz on 2009-07-24 11:37:05 as along with 10 people and 4 groups shikin waszak jfr dchughes giovanni jeremymiller frohike vpschulz shigepong debasis Bioinformatics G4ID GeschwindLab Genetics-of-Gambling

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cnv	136
expression	106
cgh	99
review	90
network	81
classification	78
acgh	65
gwas	59
teaching	59
snp	51
integration	50
software	42
microarray	36
recurrent	27
bayesian	26
normalization	26
example	25
go	24
hmm	22
causality	21
differential	21
gene	21
selection	21
sequencing	20
clustering	19
meta-analysis	19
cancer	18
common	18
fdr	18
interaction	18
reconstruction	18
science	18
survival	16
method	14
coexpression	13
region	13
web	13
design	12
pathway	12
prediction	12
computing	11
correlation	11
methylation	11
oncogenetic	11
variable	11
signature	10
statistics	10
visualization	10
association	9
clinical	9
disease	9
graphical	9
model	9
testing	9
variation	9
affymetrix	8
comparison	8
epistemology	8
fatigo	8
ontology	8
penalization	8
annotation	7
ethics	7
experimental	7
multiple	7
patent	7
power	7
quality	7
sample	7
size	7
time_series	7
transcription	7
wgas	7
chromosomal	6
copyright	6
database	6
error	6
gaussian	6
gsea	6
imputation	6
information	6
instability	6
microarrays	6
r	6
regression	6
copy	5
equation	5
factor	5
granger	5
mutation	5
networks	5
number	5
publishing	5
random	5
roc	5
set	5
svm	5
technology	5
timeseries	5
tree	5
adacgh	4
agilent	4
biclustering	4
control	4
cox	4
data	4
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forest	4
heterogeneity	4
illumina	4
individualized	4
integrative	4
lasso	4
limit	4
logistic	4
medicine	4
metanalysis	4
mirna	4
pals	4
parallelization	4
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prior	4
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qtl	4
regions	4
signatures	4
time	4
time_course	4
anova	3
application	3
bayes	3
bias	3
biomarker	3
boolean	3
bootstrap	3
effect	3
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evolution	3
examples	3
fantom	3
filtering	3
functional	3
genetic	3
genome	3
genomic	3
god	3
graph	3
landscape	3
matrix	3
mcr	3
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models	3
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phylogeny	3
population	3
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qc	3
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risk	3
rjacgh	3
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array	2
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cell	2
change	2
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drug	2
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feature	2
field	2
free	2
game	2
geneset	2
genetics	2
graphics	2
haplotype	2
hardware	2
hotspot	2
inheritance	2
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mdr	2
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multiplicity	2
open	2
organization	2
pem	2
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pls	2
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programming	2
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protein	2
rate	2
reading	2
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rf	2
series	2
sex	2
sharing	2
simulation	2
source	2
stability	2
subset	2
test	2
tissue	2
tnasas	2
t-test	2
3d	1
5	1
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ai	1
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emergence	1
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gate	1
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genesrf	1
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gpu	1
grant	1
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gui	1
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incorrect	1
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integrity	1
internet	1
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isi	1
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odds	1
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research	1
sam	1
scale	1
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sequence	1
shrinkage	1
signs	1
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uncertainty_propagation	1
union	1
unit	1
validation	1
variance	1
wave	1
web-based	1
whistleblowing	1
window	1
xp	1

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