rdiaz's review [90 articles] Export

Recent papers added to rdiaz's library classified by the tag review. You can also see everyone's review.

	How to visually interpret biological data using networks [My Copy] Nature Biotechnology, Vol. 27, No. 10. (01 October 2009), pp. 921-924. by Daniele Merico, David Gfeller, Gary D. Bader posted to visualization teaching review network by rdiaz on 2009-10-15 18:03:37 as along with 12 people and 1 group perkeo qayub mhamidi OliverHarriman AJCann grahamc megraw tmmurali fgibson gotgenes druvus dullhunk Journal picks
	Population-Wide Generalizability of Genome-Wide Discovered Associations [My Copy] J. Natl. Cancer Inst., Vol. 101, No. 19. (7 October 2009), pp. 1297-1299. by John P. A. Ioannidis posted to review population gwas critique by rdiaz on 2009-10-09 15:49:33 as along with 1 person merpublic
	Classifier Technology and the Illusion of Progress [My Copy] Statistical Science, Vol. 21, No. 1. (19 Jun 2006), pp. 1-14. by David J. Hand posted to teaching review prediction classification by rdiaz on 2009-10-09 13:15:34 as along with 2 people and 1 group arsyed mdreid Statistical Machine Learning
	A unified approach to false discovery rate estimation [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008), 303. by Korbinian Strimmer posted to teaching review fdr by rdiaz on 2009-10-09 13:08:42 as along with 12 people Zephyrus jlorent Gorzomagnificent daforerog bertelsen guhjy VGreiff dolchan barriot nuin joaocarrico shigepong
	Life After GWA Studies [My Copy] Science, Vol. 326, No. 5950. (9 October 2009), pp. 239-240. by Emmanouil T. Dermitzakis, Andrew G. Clark posted to teaching risk review prediction personalized medicine individualized gwas by rdiaz on 2009-10-09 10:25:21 as along with 1 person robfree
	Putting DNA to the test [My Copy] Nature, Vol. 461, No. 7265. (07 October 2009), pp. 697-698. posted to review personalized medicine individualized genomics ethics by rdiaz on 2009-10-08 10:47:17 as along with 1 person chriswillmott
	Origins and functional impact of copy number variation in the human genome [My Copy] Nature, Vol. advance online publication (07 October 2009) by Donald F. Conrad, Dalila Pinto, Richard Redon, et al.Lars Feuk, Omer Gokcumen, Yujun Zhang, Jan Aerts, T. Daniel Andrews, Chris Barnes, Peter Campbell, Tomas Fitzgerald, Min Hu, Chun H. Ihm, Kati Kristiansson, Daniel G. MacArthur, Jeffrey R. MacDonald, Ifejinelo Onyiah, Andy W. Pang, Sam Robson, Kathy Stirrups, Armand Valsesia, Klaudia Walter, John Wei, Chris Tyler-Smith, Nigel P. Carter, Charles Lee, Stephen W. Scherer, Matthew E. Hurles posted to review disease cnv by rdiaz on 2009-10-08 10:46:25 as along with 18 people and 1 group vplagnol biovils psique chvlyl daed daforerog zufar jessopher DrRichardBadge operon colinveal frohike sf11 sameersoi polivares dswan qayub bpcusack Journal picks
	Finding the missing heritability of complex diseases. [My Copy] Nature, Vol. 461, No. 7265. (8 October 2009), pp. 747-753. by Teri A. Manolio, Francis S. Collins, Nancy J. Cox, et al.David B. Goldstein, Lucia A. Hindorff, David J. Hunter, Mark I. McCarthy, Erin M. Ramos, Lon R. Cardon, Aravinda Chakravarti, Judy H. Cho, Alan E. Guttmacher, Augustine Kong, Leonid Kruglyak, Elaine Mardis, Charles N. Rotimi, Montgomery Slatkin, David Valle, Alice S. Whittemore, Michael Boehnke, Andrew G. Clark, Evan E. Eichler, Greg Gibson, Jonathan L. Haines, Trudy F. Mackay, Steven A. McCarroll, Peter M. Visscher posted to teaching review heritability gwas disease by rdiaz on 2009-10-08 10:44:49 as along with 16 people and 1 group virolog timflutre daveGerrard leemachado lp2 natstreet ns6 balajis jclau liqbbi josepe daforerog fenghezi carolep merpublic djkt Journal picks
	Human genetics: Sharp focus on the variable genome [My Copy] Nature, Vol. 461, No. 7265. (07 October 2009), pp. 735-736. by John A. L. Armour posted to variation teaching review cnv catalogue by rdiaz on 2009-10-08 10:43:04 as along with 4 people josepe bpcusack carolep merpublic
	An agenda for personalized medicine [My Copy] Nature, Vol. 461, No. 7265. (07 October 2009), pp. 724-726. by Pauline C. Ng, Sarah S. Murray, Samuel Levy, J. Craig Venter posted to teaching review personalized microarray medicine individualized gwas caveat by rdiaz on 2009-10-08 10:41:10 as along with 4 people operon merpublic brianb chriswillmott
	Human genetics: Hit or miss? : Nature News [My Copy] posted to teaching review gwas by rdiaz on 2009-10-08 10:39:14 as
	Survival prediction using gene expression data: A review and comparison [My Copy] Comput. Stat. Data Anal., Vol. 53, No. 5. (2009), pp. 1590-1603. by Wessel N. van Wieringen, David Kun, Regina Hampel, Anne L. Boulesteix posted to teaching survival review microarray cox by rdiaz on 2009-10-06 14:01:31 as along with 1 person Borelli
	Validating, augmenting and refining genome-wide association signals. [My Copy] Nature reviews. Genetics, Vol. 10, No. 5. (01 May 2009), pp. 318-329. by John P. Ioannidis, Gilles Thomas, Mark J. Daly posted to teaching review methods gwas experimental design by rdiaz on 2009-09-30 15:17:43 as along with 12 people druvus PabloMarin buyske daforerog turnersd psique guhjy TRHvidsten roys akundaje jbhiatt lp2
	Linking DNA methylation and histone modification: patterns and paradigms [My Copy] Nature Reviews Genetics, Vol. 10, No. 5. (01 May 2009), pp. 295-304. by Howard Cedar, Yehudit Bergman posted to teaching review methylation by rdiaz on 2009-09-30 15:16:37 as along with 9 people aprickett cvaldes inesdesantiago megraw guhjy songpku clearbluespring akundaje fenghezi
	Genome Scans: Impatient for the Payoff [My Copy] Science, Vol. 324, No. 5926. (24 April 2009), 448. by Robert Koenig posted to teaching sequencing review gwas by rdiaz on 2009-09-29 17:33:49 as along with 1 person reyez
	Molecular classification of solid tumours: towards pathway-driven therapeutics. [My Copy] British journal of cancer, Vol. 100, No. 10. (19 May 2009), pp. 1517-1522. by C. Swanton, C. Caldas posted to teaching review cnv classification cancer by rdiaz on 2009-09-29 16:03:15 as along with 5 people jfr tonamswish guhjy xtizon giovenko
	Toward a genetics of cancer resistance. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 3. (20 January 2009), pp. 859-863. by George Klein posted to review genes cancer by rdiaz on 2009-09-28 12:19:31 as along with 4 people guhjy Zephyrus TRHvidsten paulschlesinger
	Cancer resistance and Peto's paradox. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 20. (19 May 2009), pp. E51-E51. by Anders Bredberg posted to review cancer by rdiaz on 2009-09-28 12:18:31 as along with 2 people Zephyrus renatomilani
	Upcoming challenges for multiple sequence alignment methods in the high-throughput era [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2455-2465. by Carsten Kemena, Cedric Notredame posted to sequencing review by rdiaz on 2009-09-28 11:01:04 as along with 10 people and 2 groups fstrozzi manduca djkt sjcockell torfinnnome walshtp nuin natstreet druvus ollieredfernwork Journal picks Orengo Group Journal Picks
	Bioinformatics and breast cancer: what can high-throughput genomic approaches actually tell us? [My Copy] J Clin Pathol, Vol. 62, No. 10. (1 October 2009), pp. 879-885. by A. H. Sims posted to teaching statistics review cancer bioinformatics by rdiaz on 2009-09-28 10:19:08 as along with 1 person brianb
	Challenges for CNV interpretation in clinical molecular karyotyping: Lessons learned from a 1001 sample experience. [My Copy] European journal of medical genetics (15 September 2009) by Karen Buysse, Barbara Delle D. Chiaie, Rudy Van Coster, et al.Bart Loeys, Anne De Paepe, Geert Mortier, Frank Speleman, Björn Menten posted to review interpretation cnv causality by rdiaz on 2009-09-25 13:30:02 as
	Frequency, nature, effects, and correlates of conflicts of interest in published clinical cancer research [My Copy] Cancer, Vol. 115, No. 12. (2009), pp. 2783-2791. by Reshma Jagsi, Nathan Sheets, Aleksandra Jankovic, Amy R. Motomura, Sudha Amarnath, Peter A. Ubel posted to teaching review publishing publication ethics cancer bias by rdiaz on 2009-09-25 13:24:37 as
	Evaluation of Microarray Preprocessing Algorithms Based on Concordance with RT-PCR in Clinical Samples [My Copy] PLoS ONE, Vol. 4, No. 5. (21 May 2009), e5645. by Balazs Gyorffy, Bela Molnar, Hermann Lage, Zoltan Szallasi, Aron C. Eklund posted to review preprocessing comparison algorithm affymetrix by rdiaz on 2009-09-23 17:27:51 as along with 1 person bertelsen
	A change of strategy in the war on cancer [My Copy] Nature, Vol. 459, No. 7246. (27 May 2009), pp. 508-509. by Robert A. Gatenby posted to review cancer by rdiaz on 2009-09-23 17:21:47 as along with 5 people richter80 tomhebbron reyez zhlei renatomilani
	Cloud computing [My Copy] Bioinformatics, Vol. 25, No. 12. (15 June 2009), 1475. by Alex Bateman, Matt Wood posted to software review hardware computing cloud by rdiaz on 2009-09-23 16:48:26 as along with 22 people and 4 groups fgibson walshtp Jingbo aan pekrau tnhh niallhaslam bertelsen apaydin barry kiekyon reyez sobolevnrm cymacs druvus acesforum thegoose mikel_egana dullhunk dswan jmeppley bmajoros structural_bioinformatics McCammon baker-group Bioinformatics
	Hypergraphs and Cellular Networks [My Copy] PLoS Comput Biol, Vol. 5, No. 5. (29 May 2009), e1000385. by Steffen Klamt, Utz-Uwe Haus, Fabian Theis posted to review network graph by rdiaz on 2009-09-23 16:29:56 as along with 11 people ptrobajo poirel apocapoc trfield uuh danmaclean fgibson dswan tmmurali Borelli shikin
	Finding the fifth base: Genome-wide sequencing of cytosine methylation [My Copy] Genome Research, Vol. 19, No. 6. (9 June 2009), pp. 959-966. by Ryan Lister, Joseph R. Ecker posted to sequencing review methylation by rdiaz on 2009-09-23 16:05:33 as along with 6 people and 1 group saravana clearbluespring reyez natstreet jessopher bpcusack Chinnaiyan Lab
	RNA-Seq: a revolutionary tool for transcriptomics [My Copy] Nature Reviews Genetics, Vol. 10, No. 1. (01 January 2009), pp. 57-63. by Zhong Wang, Mark Gerstein, Michael Snyder posted to technology sequencing review by rdiaz on 2009-09-23 15:51:50 as along with 38 people sandfire maren jwfoley urgi RNA-protein cthachuk heliopais GustavoLacerda TRHvidsten dswan roys woodson8 jonilaserson gdb n00c ThomasDOtto burak natstreet athma druvus tonamswish fishtank daed JohnBallam jmcq dandaman cassj xingxu idonaldson raiyar inesdesantiago vplagnol jbhiatt giovanni orzenil nuin guhjy GeeSharpMinor
	ChIP\|[ndash]\|seq: advantages and challenges of a maturing technology [My Copy] Nature Reviews Genetics, Vol. 10, No. 10. (08 September 2009), pp. 669-680. by Peter J. Park posted to technology sequencing review by rdiaz on 2009-09-23 15:51:29 as along with 22 people and 6 groups dchughes RyuOgawa heliopais giovenko inesdesantiago pradiptaray dakelley clearbluespring akundaje kimorley leliavski humburg reyez qayub fenghezi tonamswish robertrentzsch polivares idonaldson rschulz cvaldes danmaclean Journal picks Orengo Group Journal Picks JLab BergmanLab CTCF Chromatin
	From DNA sequence to transcriptional behaviour: a quantitative approach. [My Copy] Nature reviews. Genetics, Vol. 10, No. 7. (01 July 2009), pp. 443-456. by Eran Segal, Jonathan Widom posted to transcription teaching review modeling factor expression binding by rdiaz on 2009-09-23 15:50:02 as along with 11 people and 1 group ptrobajo guhjy dakelley megraw ilyashl francemirko talponer tonamswish clearbluespring TRHvidsten fenghezi TranscriptionalRegulationWithThermodynamicModels
	Genome-wide association studies: Detecting gene-gene interactions that underlie human diseases. [My Copy] Nature reviews. Genetics, Vol. 10, No. 6. (12 May 2009), pp. 392-404. by Heather J. Cordell posted to teaching review interaction gwas epistasis by rdiaz on 2009-09-23 15:45:54 as along with 16 people and 3 groups lwaldron PabloMarin misonneh kimorley ilyashl pkonings lp2 turnersd akundaje Zephyrus daforerog roys colmryan fenghezi jbhiatt guhjy Journal picks MGEL Reading Roswell Cancer Crosstalk
	Bayesian statistical methods for genetic association studies. [My Copy] Nature reviews. Genetics, Vol. 10, No. 10. (01 October 2009), pp. 681-690. by Matthew Stephens, David J. Balding posted to teaching review gwas bayesian by rdiaz on 2009-09-21 17:27:59 as along with 22 people and 1 group shikin heliopais Zephyrus nuin matjes pkonings fastjoe23 guhjy maren gregdavisfromnj natstreet TRHvidsten zufar n00c lwaldron megraw kimorley leliavski misonneh qayub daforerog druvus Journal picks
	Impossibility of successful classification when useful features are rare and weak [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 22. (2 June 2009), pp. 8859-8864. by Jiashun Jin posted to review microarray classification by rdiaz on 2009-09-16 16:30:21 as along with 3 people gdb zwang TRHvidsten
	Algorithms for Calling Gains and Losses in Array CGH Data. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 556 (2009), pp. 99-116. by Pei Wang posted to review method cgh by rdiaz on 2009-09-15 17:56:27 as along with 1 person shikin
	Comparative Genomic Hybridization on BAC Arrays. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 556 (2009), pp. 7-19. by Bradley P. Coe, William W. Lockwood, Raj Chari, Wan L. Lam posted to review cgh bac by rdiaz on 2009-09-15 17:48:27 as
	Comparative genomic hybridization on spotted oligonucleotide microarrays. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 556 (2009), pp. 21-32. by Young H. Kim, Jonathan R. Pollack posted to review oligonucleotide cgh by rdiaz on 2009-09-15 17:48:07 as
	Potential etiologic and functional implications of genome-wide association loci for human diseases and traits [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 23. (9 June 2009), pp. 9362-9367. by Lucia A. Hindorff, Praveen Sethupathy, Heather A. Junkins, et al.Erin M. Ramos, Jayashri P. Mehta, Francis S. Collins, Teri A. Manolio posted to snp review gwas disease catalog association by rdiaz on 2009-09-11 11:46:25 as along with 6 people liqbbi guhjy zufar daforerog pkonings jsatkosk
	Transcribing the genome. [My Copy] Nature, Vol. 461, No. 7261. (10 September 2009), pp. 185-185. by Alex Eccleston, Magdalena Skipper posted to transcription review by rdiaz on 2009-09-10 15:24:38 as along with 1 person rsaito
	Molecular networks as sensors and drivers of common human diseases [My Copy] Nature, Vol. 461, No. 7261. (09 September 2009), pp. 218-223. by Eric E. Schadt posted to review network expression disease causality by rdiaz on 2009-09-10 15:23:00 as along with 14 people robfree apocapoc ptrobajo MurphysLab biomcgary greg inesdesantiago pablocarb brianb abhishek_tiwari zufar pkonings daforerog megraw
	Copy-number variation: the end of the human genome? [My Copy] Trends in biotechnology, Vol. 27, No. 8. (01 August 2009), pp. 448-454. by Paul H. Dear posted to technology review cnv by rdiaz on 2009-09-09 16:27:59 as along with 2 people pkonings VGreiff
	The genetics of quantitative traits: challenges and prospects [My Copy] Nat Rev Genet, Vol. 10, No. 8. (7 August 2009), pp. 565-577. by Trudy F. C. Mackay, Eric A. Stone, Julien F. Ayroles posted to trait review quantitative genetics by rdiaz on 2009-09-09 13:47:01 as along with 13 people Zephyrus timflutre xingxu pkonings TRHvidsten kevinemamy kathrynmrobinson natstreet misonneh guhjy daforerog druvus psique
	Scale-Free Networks: A Decade and Beyond [My Copy] Science, Vol. 325, No. 5939. (24 July 2009), pp. 412-413. by Albert-Laszlo Barabasi posted to scale review network by rdiaz on 2009-09-08 16:56:15 as along with 22 people and 1 group echi sld65 ddahlem normaali thegoose matteodellamico cjryan aidankeane melo_mcr sergiun compbio harrykipper reyez ganden Borelli druvus apocapoc dullhunk dswan daforerog tnhh pick600 LABSS
	Revisiting the Foundations of Network Analysis [My Copy] Science, Vol. 325, No. 5939. (24 July 2009), pp. 414-416. by Carter T. Butts posted to review reconstruction network assumption by rdiaz on 2009-09-08 16:54:41 as along with 12 people normaali adriandefroment matteodellamico guhjy ddahlem aidankeane druvus Borelli apocapoc tnhh dswan daforerog
	Transcriptional Regulatory Circuits: Predicting Numbers from Alphabets [My Copy] Science, Vol. 325, No. 5939. (24 July 2009), pp. 429-432. by Harold D. Kim, Tal Shay, Erin K. O'Shea, Aviv Regev posted to review reconstruction network by rdiaz on 2009-09-08 16:52:35 as along with 16 people and 1 group pkm ptrobajo bborgeson guhjy sergiun emptyhb greg cajunsushi Borelli leliavski TRHvidsten jjray apocapoc fenghezi dswan daforerog Gene Regulation
	Comparing CNV detection methods for SNP arrays [My Copy] Brief Funct Genomic Proteomic, Vol. 8, No. 5. (8 September 2009), pp. elp017-366. by Laura Winchester, Christopher Yau, Jiannis Ragoussis posted to snp review comparison cnv by rdiaz on 2009-09-08 16:40:37 as along with 2 people daed jsatkosk
	Combining estimates of interest in prognostic modelling studies after multiple imputation: current practice and guidelines. [My Copy] BMC medical research methodology, Vol. 9, No. 1. (28 July 2009), 57. by Andrea Marshall, Douglas G. Altman, Roger L. Holder, Patrick Royston posted to teaching review multiple imputation by rdiaz on 2009-09-08 12:31:20 as along with 1 person guhjy
	Closing the gap between genotype and phenotype [My Copy] Nat Genet, Vol. 41, No. 9. (September 2009), pp. 958-959. by Peter K. Gregersen posted to teaching review phenotype gwas by rdiaz on 2009-09-08 11:21:06 as
	On the Origin of Cooperation [My Copy] Science, Vol. 325, No. 5945. (4 September 2009), pp. 1196-1199. by Elizabeth Pennisi posted to teaching review cooperation by rdiaz on 2009-09-07 12:24:14 as along with 9 people and 3 groups halukbingol lafuente anarinsk farhat srijit acrmartins apocapoc MarioPaolucci jago Soslab LABSS Participatory_Methods_for_Development
	Comparative study of gene set enrichment methods [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 275. by Luca Abatangelo, Rosalia Maglietta, Angela Distaso, et al.Annarita D'Addabbo, Teresa Creanza, Sayan Mukherjee, Nicola Ancona posted to review go functional fatigo annotation by rdiaz on 2009-09-07 11:41:37 as along with 10 people shikin dswan zufar heliopais fpattyn pengchy daforerog arjun_citeulike barriot druvus
	Copy Number Variation in Human Health, Disease, and Evolution [My Copy] Annual Review of Genomics and Human Genetics, Vol. 10, No. 1. (2009), pp. 451-481. by Feng Zhang, Wenli Gu, Matthew E. Hurles, James R. Lupski posted to review cnv cgh by rdiaz on 2009-09-03 14:01:38 as along with 2 people sf11 scmelton

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repeats	1
replicate	1
reproducibility	1
resampling	1
research	1
sam	1
scale	1
segmentation	1
sensitivity	1
sequence	1
shrinkage	1
signs	1
similarity	1
single-gene	1
smooth	1
society	1
sparse	1
spatial	1
spatiotemporal	1
specificity	1
spectral	1
sperm	1
splicing	1
standards	1
stochastic	1
storage	1
structural	1
subject	1
superstition	1
svd	1
synthetic	1
systems	1
target	1
text	1
theory	1
threshold	1
thresholding	1
tiling	1
trait	1
transcription_factors	1
translational	1
truth	1
tumor	1
uncertainty	1
uncertainty_propagation	1
union	1
unit	1
validation	1
variance	1
wave	1
web-based	1
whistleblowing	1
window	1
xp	1

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