renatomilani's gene [58 articles] Export

Recent papers added to renatomilani's library classified by the tag gene. You can also see everyone's gene.

	How to identify essential genes from molecular networks? [My Copy] BMC Systems Biology, Vol. 3, No. 1. (2009), 102. by Gabriel D. Rio, Dirk Koschutzki, Gerardo Coello posted to systems network gene by renatomilani on 2009-10-13 20:21:30 as along with 8 people lptolik operon tmmurali kshameer phoenixzxl ptrobajo druvus daforerog
	Improving detection of differentially expressed gene sets by applying cluster enrichment analysis to Gene Ontology [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (5 August 2009), 240. by Tao Xu, JianLei Gu, Yan Zhou, LinFang Du posted to clustering expression gene go by renatomilani on 2009-08-06 03:45:57 as along with 9 people dipenps rdiaz tonamswish guhjy lwaldron dswan RamuAnandakrishnan barriot kshameer
	A global meta-analysis of microarray expression data to predict unknown gene functions and estimate the literature-data divide. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 13. (1 July 2009), pp. 1694-1701. by Jonathan D. Wren posted to bioinformatics expression function gene microarray by renatomilani on 2009-07-08 01:40:21 as along with 10 people and 2 groups jfr jperkins fenghezi guhjy VGreiff mitko dswan TRHvidsten daforerog shikin Orengo Group Journal Picks Bioinformatics
	Computational methods for discovering gene networks from expression data [My Copy] Brief Bioinform, Vol. 10, No. 4. (1 July 2009), pp. 408-423. by Wei-Po Lee, Wen-Shyong Tzou posted to bioinformatics expression gene methods network tool by renatomilani on 2009-06-22 23:00:05 as along with 9 people and 1 group jfr jperkins sotacam GustavoLacerda gotgenes ruichu antonkratz lp2 TRHvidsten Orengo Group Journal Picks
	The regulated retrotransposon transcriptome of mammalian cells [My Copy] Nature Genetics, Vol. 41, No. 5. (19 April 2009), pp. 563-571. by Geoffrey J. J. Faulkner, Yasumasa Kimura, Carsten O. O. Daub, et al.Shivangi Wani, Charles Plessy, Katharine M. M. Irvine, Kate Schroder, Nicole Cloonan, Anita L. L. Steptoe, Timo Lassmann, Kazunori Waki, Nadine Hornig, Takahiro Arakawa, Hazuki Takahashi, Jun Kawai, Alistair R. R. R. Forrest, Harukazu Suzuki, Yoshihide Hayashizaki, David A. A. Hume, Valerio Orlando, Sean M. M. Grimmond, Piero Carninci posted to expression gene regulation transcription transposon by renatomilani on 2009-05-29 12:37:45 as along with 13 people and 2 groups inesdesantiago guhjy gdb galka8_diploma tonamswish cisevol robfsouza dchughes mtagaya fenghezi jbhiatt natstreet antonkratz cis-regulatory-evolution BergmanLab
	F1000: The regulated retrotransposon transcriptome of mammalian cells. [My Copy] posted to expression f1000 gene regulation transcription transposon by renatomilani on 2009-05-29 12:37:09 as
	GeneCodis: interpreting gene lists through enrichment analysis and integration of diverse biological information. [My Copy] Nucleic acids research, Vol. 37, No. Web Server issue. (1 July 2009), pp. W317-322. by Ruben Nogales-Cadenas, Pedro Carmona-Saez, Miguel Vazquez, et al.Cesar Vicente, Xiaoyuan Yang, Francisco Tirado, Jose María M. Carazo, Alberto Pascual-Montano posted to enrichment gene tool by renatomilani on 2009-05-26 02:37:35 as along with 5 people natstreet daforerog psique pininforthefjords guhjy
	WhichGenes: a web-based tool for gathering, building, storing and exporting gene sets with application in gene set enrichment analysis [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W329-334. by Daniel Glez-Pena, Gonzalo Gomez-Lopez, David G. Pisano, Florentino Fdez-Riverola posted to bioinformatics data enrichment gene gene-set tool by renatomilani on 2009-05-07 20:03:14 as along with 5 people burak frohike yaredo daforerog guhjy
	Commonality but Diversity in Cancer Gene Fusions [My Copy] Vol. 137, No. 3. (1 May 2009), pp. 391-395. by Terence H. Rabbitts posted to cancer gene review by renatomilani on 2009-05-02 02:10:03 as
	Genetic dissection of histone deacetylase requirement in tumor cells [My Copy] Proceedings of the National Academy of Sciences (29 April 2009) by Michael Haberland, Aaron Johnson, Mayssa H. Mokalled, Rusty L. Montgomery, Eric N. Olson posted to cancer gene histone sirtuin by renatomilani on 2009-04-30 23:58:07 as
	Genes Know How To Network [My Copy] posted to gene network by renatomilani on 2009-04-27 04:15:58 as
	Dissecting genetic requirements of human breast tumorigenesis in a tissue transgenic model of human breast cancer in mice. [My Copy] Proceedings of the National Academy of Sciences of the United States of America (15 April 2009) by Min Wu, Lina Jung, Adrian B B. Cooper, et al.Christina Fleet, Lihao Chen, Lyne Breault, Kimberly Clark, Zuhua Cai, Sylvie Vincent, Steve Bottega, Qiong Shen, Andrea Richardson, Marcus Bosenburg, Stephen P P. Naber, Ronald A A. Depinho, Charlotte Kuperwasser, Murray O O. Robinson posted to cancer gene modelling by renatomilani on 2009-04-22 14:40:31 as
	Role of Jhdm2a in regulating metabolic gene expression and obesity resistance [My Copy] Nature (04 February 2009) by Keisuke Tateishi, Yuki Okada, Eric M. Kallin, Yi Zhang posted to expression gene histone metabolism obesity by renatomilani on 2009-04-13 20:42:54 as
	Genetic analysis of radiation-induced changes in human gene expression [My Copy] Nature (06 April 2009) by Denis A. Smirnov, Michael Morley, Eunice Shin, Richard S. Spielman, Vivian G. Cheung posted to expression gene radiation by renatomilani on 2009-04-13 20:34:31 as along with 3 people jfr Yoko leliavski
	Genetics: Unraveling the genetics of autoimmune disease [My Copy] Nat Rev Rheumatol, Vol. 5, No. 4. (April 2009), pp. 187-188. by Timothy J. Vyse posted to disease gene immunology by renatomilani on 2009-04-06 01:47:19 as
	Genes of cell-cell interactions, chemotherapy detoxification and apoptosis are induced during chemotherapy of acute myeloid leukemia [My Copy] BMC Cancer, Vol. 9 (05 March 2009), 77. by Anne, Bjorn T. Gjertsen posted to apoptosis cell chemotherapy expression gene interaction leukemia microarray by renatomilani on 2009-03-09 16:10:45 as
	Disease candidate gene identification and prioritization using protein interaction networks [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 73. by Jing Chen, Bruce Aronow, Anil Jegga posted to bioinformatics gene interaction network protein by renatomilani on 2009-02-28 20:24:23 as along with 12 people and 1 group carlk zufar guhjy jfr daforerog saket provero mitko neils barriot grahamc rjazwiec Bioinformatics
	Dysregulated gene expression networks in human acute myelogenous leukemia stem cells. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 9. (3 March 2009), pp. 3396-3401. by R. Majeti, M. W. Becker, Q. Tian, et al.T. L. Lee, X. Yan, R. Liu, J. H. Chiang, L. Hood, M. F. Clarke, I. L. Weissman posted to bioinformatics cancer chip database expression gene leukemia microarray network pathway stem-cell by renatomilani on 2009-02-16 02:20:16 as along with 2 people jfr tibbitts
	Gene Expression Levels Are a Target of Recent Natural Selection in the Human Genome [My Copy] Mol Biol Evol, Vol. 26, No. 3. (1 March 2009), pp. 649-658. by Sridhar Kudaravalli, Jean-Baptiste Veyrieras, Barbara E. Stranger, Emmanouil T. Dermitzakis, Jonathan K. Pritchard posted to evolution expression gene selection snp by renatomilani on 2009-02-13 18:14:15 as along with 10 people and 4 groups daveGerrard rcr1991 ashkelon13 gaolindyF dpollard Zephyrus fenghezi kintoki ilyashl djkt BergmanLab RockmanLab cis-regulatory-evolution R.E.A.D
	Assessing and selecting gene expression signals based upon the quality of the measured dynamics [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009) by Eric Yang, Ioannis Androulakis posted to chip expression gene methods microarray statistics by renatomilani on 2009-02-12 11:58:33 as along with 1 person guhjy
	Meta-analysis of age-related gene expression profiles identifies common signatures of aging [My Copy] Bioinformatics, Vol. 25, No. 7. (1 April 2009), pp. 875-881. by Joao P. de Magalhaes, Joao Curado, George M. Church posted to age chip expression gene microarray profiles signature by renatomilani on 2009-02-11 20:26:04 as along with 7 people and 1 group Zephyrus jfr guhjy daforerog dswan rdiaz vertikalist BTS-PT-AS-CS
	A general modular framework for gene set enrichment analysis [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (03 February 2009), 47. by Marit Ackermann, Korbinian Strimmer posted to gene methods microarray tool by renatomilani on 2009-02-10 03:56:08 as along with 17 people and 1 group ptrobajo zufar srp33 vingron dipenps shikin arjun_citeulike guhjy pk506 aviad_work thomaskelder ydhwang rdiaz kshameer dswan cmzmasek RamuAnandakrishnan Bioinformatics
	GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists. [My Copy] BMC bioinformatics, Vol. 10 (03 February 2009), 48. by Eran Eden, Roy Navon, Israel Steinfeld, Doron Lipson, Zohar Yakhini posted to bioinformatics gene go tool visualization by renatomilani on 2009-02-10 03:55:18 as along with 8 people and 1 group Effie guhjy RamuAnandakrishnan kshameer grahamc cmzmasek paszkows jmeppley NaCTeM
	Why Is the Correlation between Gene Importance and Gene Evolutionary Rate So Weak? [My Copy] PLoS Genet, Vol. 5, No. 1. (January 2009), e1000329. by Zhi Wang, Jianzhi Zhang posted to evolution gene by renatomilani on 2009-02-10 03:10:28 as along with 11 people and 2 groups daveGerrard rdiaz michaelbarton dpollard pkonings katholt druvus Zephyrus djkt trfield cabbagesofdoom RockmanLab R.E.A.D
	A microarray analysis for differential gene expression in the soybean genome using Bioconductor and R [My Copy] Brief Bioinform (17 October 2007), bbm043. by W. Gregory Alvord, Jean A. Roayaei, Octavio A. Quinones, Schneider posted to bioconductor bioinformatics expression gene genome microarray r by renatomilani on 2009-01-30 10:17:43 as along with 2 people jperkins bertelsen
	Characterization of sonic hedgehog as a novel NF-kappaB target gene that promotes NF-kappaB-mediated apoptosis resistance and tumor growth in vivo [My Copy] FASEB J., Vol. 23, No. 1. (1 January 2009), pp. 21-33. by Hubert Kasperczyk, Bernd Baumann, Klaus-Michael Debatin, Simone Fulda posted to apoptosis cancer gene hedgehog nf-kb promoter resistance by renatomilani on 2009-01-19 16:42:47 as
	GeneChaser: identifying all biological and clinical conditions in which genes of interest are differentially expressed. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (2008) by R. Chen, R. Mallelwar, A. Thosar, S. Venkatasubrahmanyam, A. J. Butte posted to bioinformatics database expression gene microarray tool by renatomilani on 2009-01-08 13:40:11 as along with 13 people and 2 groups rcr1991 zufar daforerog TRHvidsten jfr ilyashl dswan Zephyrus tny guhjy cgaugain barriot GeeSharpMinor Bioinformatics Roswell Cancer Crosstalk
	Identification of candidate disease genes by integrating Gene Ontologies and protein-interaction networks: case study of primary immunodeficiencies [My Copy] Nucl. Acids Res. (10 December 2008), gkn982. by Csaba Ortutay, Mauno Vihinen posted to bioinformatics gene immunology interaction network ontology protein tool by renatomilani on 2009-01-06 00:55:44 as along with 1 person guhjy
	DNA assembler, an in vivo genetic method for rapid construction of biochemical pathways. [My Copy] Nucleic acids research, Vol. 37, No. 2. (12 February 2009), gkn991. by Z. Shao, H. Zhao, H. Zhao posted to biology dna gene pathway synthetic by renatomilani on 2009-01-06 00:47:23 as along with 7 people and 1 group guhjy mtruksa austin Vincent_Rouilly dbikard skoch3 dullhunk Koch_Lab
	Gene networks: Network analysis gets dynamic [My Copy] posted to expression gene network by renatomilani on 2009-01-04 21:33:14 as
	FitSNPs: highly differentially expressed genes are more likely to have variants associated with disease. [My Copy] Genome biology, Vol. 9, No. 12. (2008) by R. Chen, A. A. Morgan, J. Dudley, et al.T. Deshpande, L. Li, K. Kodama, A. P. Chiang, A. J. Butte posted to expression gene index methods microarray snp tool by renatomilani on 2008-12-18 11:59:27 as along with 9 people daforerog jfr brdwilde djkt Zephyrus druvus natstreet gjoslyn caseybrown
	Multivariate gene expression analysis reveals functional connectivity changes between normal/tumoral prostates [My Copy] BMC Systems Biology, Vol. 2, No. 1. (2008) by Andre Fujita, Luciana Gomes, Joao Sato, et al.Rui Yamaguchi, Carlos Thomaz, Mari Sogayar, Satoru Miyano posted to cancer expression function gene microarray prostate by renatomilani on 2008-12-16 19:52:31 as along with 3 people and 1 group xingxu imina diging_data BTS-PT-AS-CS
	LRpath: A logistic regression approach for identifying enriched biological groups in gene expression data [My Copy] Bioinformatics (27 November 2008), btn592. by Maureen A. Sartor, George D. Leikauf, Mario Medvedovic posted to expression gene math microarray pathway statistics by renatomilani on 2008-12-04 19:31:14 as along with 8 people and 2 groups zufar rdiaz jfr guhjy heliopais VGreiff dswan Zephyrus Bioinformatics Roswell Cancer Crosstalk
	SIRT1 Redistribution on Chromatin Promotes Genomic Stability but Alters Gene Expression during Aging [My Copy] Cell, Vol. 135, No. 5. (28 November 2008), pp. 907-918. by P. Oberdoerffer, S. Michan, M. Mcvay, et al.R. Mostoslavsky, J. Vann, S. Park, A. Hartlerode, J. Stegmuller, A. Hafner, P. Loerch posted to age dna dna-damage expression gene by renatomilani on 2008-11-28 17:20:51 as along with 5 people smichan psique catcremona zhlei joseph_x_zhou
	Tandem Duplication Producing a Novel Oncogenic BRAF Fusion Gene Defines the Majority of Pilocytic Astrocytomas [My Copy] Cancer Res, Vol. 68, No. 21. (1 November 2008), pp. 8673-8677. by David T. Jones, Sylvia Kocialkowski, Lu Liu, et al.Danita M. Pearson, Magnus L. Backlund, Koichi Ichimura, Peter V. Collins posted to cancer fusion gene kinase oncogene by renatomilani on 2008-11-28 13:08:05 as
	Identifying differential correlation in gene/pathway combinations [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (18 November 2008), 488. by Rosemary Braun, Leslie Cope, Giovanni Parmigiani posted to gene methods microarray pathway tool by renatomilani on 2008-11-19 11:20:34 as along with 11 people dolchan dipenps zufar jfr shikin mdstobbe imina rdiaz lptolik barriot ptrobajo
	Frameshift mutations in coding repeats of protein tyrosine phosphatase genes in colorectal tumors with microsatellite instability [My Copy] BMC Cancer, Vol. 8 (10 November 2008), 329. by Sebastian Korff, Stefan M. Woerner, Yan P. Yuan, Peer Bork, Magnus, Johannes Gebert posted to cancer gene microsatellite mutation ptp tyrosine by renatomilani on 2008-11-18 12:10:33 as
	Genetic mapping in human disease. [My Copy] Science (New York, N.Y.), Vol. 322, No. 5903. (7 November 2008), pp. 881-888. by David Altshuler, Mark J. Daly, Eric S. Lander posted to gene map by renatomilani on 2008-11-07 17:27:44 as along with 19 people and 1 group psique mingzhi buyske Zephyrus ilyashl rdiaz zufar jfr maren guhjy daforerog gbloeb jbhiatt eetadic vplagnol cheyloveday songpku lp2 pkonings Roswell Cancer Crosstalk
	Gene regulation: A tiny missing link for regulatory networks - Cell Signaling Update - Signaling Gateway [My Copy] posted to gene network regulation by renatomilani on 2008-11-07 17:27:14 as
	A Novel Signaling Pathway Impact Analysis (SPIA) [My Copy] Bioinformatics (5 November 2008), btn577. by Adi L. Tarca, Sorin Draghici, Purvesh Khatri, et al.Sonia S. Hassan, Pooja Mittal, Jung-Sun Kim, Chong J. Kim, Juan P. Kusanovic, Roberto Romero posted to bioinformatics expression gene pathway signaling systems tool by renatomilani on 2008-11-07 15:05:03 as along with 8 people and 1 group ipark-kaist bertelsen jfr heliopais lptolik AlexanderPico thomaskelder guhjy ConklinLab
	Turning anti-ageing genes against cancer [My Copy] Nature Reviews Molecular Cell Biology, Vol. 9, No. 11., pp. 903-910. by Valter D. Longo, Michael R. Lieber, Jan Vijg posted to age cancer gene network pathway by renatomilani on 2008-10-25 17:05:21 as
	Mining protein networks for synthetic genetic interactions [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Sri Paladugu, Shan Zhao, Animesh Ray, Alpan Raval posted to bioinformatics gene interaction network protein svm by renatomilani on 2008-10-10 20:03:03 as along with 1 person dakelley
	Critical pathways in cellular senescence and immortalization revealed by gene expression profiling. [My Copy] Oncogene, Vol. 27, No. 46. (9 October 2008), pp. 5975-5987. by A. L. Fridman, M. A. Tainsky posted to gene pathway profiling by renatomilani on 2008-10-06 18:38:54 as along with 1 person guhjy
	Evolution of Evolvability in Gene Regulatory Networks [My Copy] PLoS Comput Biol, Vol. 4, No. 7. (11 July 2008), e1000112. by Anton Crombach, Paulien Hogeweg posted to evolution gene network regulation by renatomilani on 2008-09-23 12:21:59 as along with 18 people and 1 group tomhebbron roys mjoach semrich wangbo kaarsinogen aramesh2 erel10 Ema jdiezperezj bootsy dlobo Stew djkt dquest shoshin rebeccamancy Borelli GEB
	The kinase p38[alpha] serves cell type-specific inflammatory functions in skin injury and coordinates pro- and anti-inflammatory gene expression [My Copy] Nat Immunol, Vol. 9, No. 9. (2008), pp. 1019-1027. by Chun Kim, Yasuyo Sano, Kristina Todorova, et al.Bradley A. Carlson, Luis Arpa, Antonio Celada, Toby Lawrence, Kinya Otsu, Janice L. Brissette, Arthur, Jin M. Park posted to expression gene inflammation kinase by renatomilani on 2008-08-19 20:40:16 as along with 1 person and 4 groups HEIRS HEIRS Inflammatory Bowel Disease, Colititis, and IBS HEIRS - Environmental Illness Research HEIRS Dermetology HEIRS Cellular Biology
	TISs-ST: a web server to evaluate polymorphic translation initiation sites and their reflections on the secretory targets [My Copy] BMC Bioinformatics, Vol. 8 (21 May 2007), 160. by Renato Vicentini, Marcelo Menossi posted to gene sequence tool by renatomilani on 2008-08-06 21:29:12 as
	The rus Operon Genes Are Differentially Regulated When Acidithiobacillus ferrooxidans LR is Kept in Contact with Metal Sulfides [My Copy] Current Microbiology, Vol. 57, No. 4. (30 July 2008), pp. 375-380. by Camila Carlos, Fernanda Reis, Renato Vicentini, Danielle Madureira, Laura Ottoboni posted to gene regulation by renatomilani on 2008-08-06 21:28:22 as
	Information Content of Individual Genetic Sequences [My Copy] Journal of Theoretical Biology, Vol. 189, No. 4. (21 December 1997), pp. 427-441. by T. D. Schneider posted to bioinformatics gene sequence by renatomilani on 2008-08-06 21:27:28 as
	Inferring differentiation pathways from gene expression [My Copy] Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i156-164. by Ivan G. Costa, Stefan Roepcke, Christoph Hafemeister, Alexander Schliep posted to bioinformatics expression gene pathway by renatomilani on 2008-06-27 16:14:13 as along with 2 people roys balicea
	Use and misuse of the gene ontology annotations [My Copy] Nature Reviews Genetics by S. Y. Rhee, V. Wood, K. Dolinski, S. Draghici posted to gene ontology by renatomilani on 2008-05-16 21:36:45 as

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cancer	227
kinase	213
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review	120
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