Experimental designs for 2-colour cDNA microarray experiments: Research Articles TeX Export

@article{citeulike:6088410, abstract = {Kerr and Churchill ( Biostatistics 2001; 2 :183\–201) showed how varieties (e.g. type of tissues, drug treatments, etc.) are paired onto arrays by a catalogue of A-optimal incomplete block designs (IBDs) for 6\–10 varieties ( v ), and number of blocks of size 2 between v and \$ \left(v \atop 2 \right)\$. These A-optimal IBDs were obtained by (i) generating all non-isomorphic connected graphs on v vertices using Brendan McKay's, MAKEG program () and (ii) comparing all designs of the same size on the basis of A-optimality to obtain the best ones.In this paper we will give a quick overview on IBDs and describe an algorithmic approach to extend the mentioned catalogue. We aim at IBDs with up to 100 varieties with equal as well as unequal replications. A catalogue of 2007 IBDs is given. We will also extend the concept of even designs in Kerr and Churchill ( Biostatistics 2001; 2 :183\–201) to row-orthogonal designs. Copyright \© 2006 John Wiley \& Sons, Ltd.}, address = {Chichester, UK}, author = {Nguyen, Nam K. and Williams, E. R.}, citeulike-article-id = {6088410}, citeulike-linkout-0 = {http://portal.acm.org/citation.cfm?id=1191848}, citeulike-linkout-1 = {http://dx.doi.org/10.1002/asmb.v22:5/6}, doi = {10.1002/asmb.v22:5/6}, issn = {1524-1904}, journal = {Appl. Stoch. Model. Bus. Ind.}, number = {5--6}, pages = {631--638}, posted-at = {2009-11-09 13:44:31}, priority = {0}, publisher = {John Wiley and Sons Ltd.}, title = {Experimental designs for 2-colour cDNA microarray experiments: Research Articles}, url = {http://dx.doi.org/10.1002/asmb.v22:5/6}, volume = {22}, year = {2006} }

TY - JOUR ID - citeulike:6088410 L3 - citeulike-article-id:6088410 N2 - Kerr and Churchill ( Biostatistics 2001; 2 :183–201) showed how varieties (e.g. type of tissues, drug treatments, etc.) are paired onto arrays by a catalogue of A-optimal incomplete block designs (IBDs) for 6–10 varieties ( v ), and number of blocks of size 2 between v and $ \left(v \atop 2 \right)$. These A-optimal IBDs were obtained by (i) generating all non-isomorphic connected graphs on v vertices using Brendan McKay's, MAKEG program () and (ii) comparing all designs of the same size on the basis of A-optimality to obtain the best ones.In this paper we will give a quick overview on IBDs and describe an algorithmic approach to extend the mentioned catalogue. We aim at IBDs with up to 100 varieties with equal as well as unequal replications. A catalogue of 2007 IBDs is given. We will also extend the concept of even designs in Kerr and Churchill ( Biostatistics 2001; 2 :183–201) to row-orthogonal designs. Copyright © 2006 John Wiley & Sons, Ltd. IS - 5--6 JF - Appl. Stoch. Model. Bus. Ind. SN - 1524-1904 AD - Chichester, UK EP - 638 TI - Experimental designs for 2-colour cDNA microarray experiments: Research Articles PB - John Wiley and Sons Ltd. VL - 22 SP - 631 AU - Nguyen, Nam AU - Williams, ER PY - 2006/// UR - http://dx.doi.org/10.1002/asmb.v22:5/6 ER -