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protein	160
evolution	148
aravind	66
sequence	62
enzyme	57
inactive	54
structure	51
gene	43
fold	39
indel	35
network	35
interaction	34
length	33
domain	32
molecular	31
genome	30
dna	29
complexity	28
chromatin	28
biological	27
transcription	25
binding	24
low	24
superfamily	23
repeats	22
alignment	22
proteins	21
regulation	21
virus	19
animals	19
phylogeny	19
acid	19
genetic	18
mutation	18
classification	18
models	17
amino	16
selection	15
database	14
bioinformatics	14
humans	14
family	14
recombination	14
chromosome	13
analysis	12
genetics	12
codon	12
eukaryote	11
elements	11
homopeptide	11
prokaryotes	11
method	11
complex	11
cell	10
atpase	10
expression	9
bias	8
bacteria	8
data	8
replication	8
tertiary	8
phylogenetics	8
signal	7
duplication	7
conformation	7
development	7
biology	7
correlation	7
homology	7
conserved	7
disease	7
rna	7
carbohydrate	7
computational	7
escrt	6
signaling	6
division	6
annotation	6
mobile	6
composition	6
ubiquitin	6
factor	6
comparative	6
ubap1	6
transduction	6
assembly	6
ntpase	6
evolutionary	5
phylogenomics	5
repair	5
saccharomyces	5
female	5
contact	5
transposon	5
histone	5
substitution	5
genes	5
interolog	5
archaea	5
bacterial	5
interface	5
motifs	5
human	5
polymorphism	5
site	4
algorithms	4
transfer	4
review	4
simulation	4
architecture	4
rate	4
modification	4
horizontal	4
segregation	4
rhodopsin	4
large	4
genomics	4
variation	4
adaptation	4
cerevisiae	4
polymerase	4
fungal	4
phenotype	4
coevolution	4
escherichia	4
scale	4
reading	3
primates	3
open	3
disordered	3
inference	3
prediction	3
kinase	3
population	3
transposable	3
receptor	3
evodevo	3
science	3
male	3
frames	3
domains	3
ribosomal	3
nucleic	3
intrinsically	3
membrane	3
reproducibility	3
nucleotide	3
databases	3
ancestral	3
recombinant	3
topoisomerase	3
origin	3
viral	3
specificity	3
software	3
results	3
folding	3
quaternary	3
methods	3
restriction	3
dataset	3
coli	3
enzymes	3
compensatory	3
level	3
factors	3
endonuclease	3
computer	3
system	2
proteomics	2
statistics	2
chemotaxis	2
exon	2
pathways	2
tol	2
fitness	2
states	2
secondary	2
fusion	2
ribosome	2
likelihood	2
placenta	2
p-loop	2
multigene	2
reconstruction	2
shuffling	2
drosophila	2
mcmc	2
microscopy	2
structural	2
ligands	2
centrality	2
silencing	2
aaa	2
algorithm	2
metabolism	2
apoptosis	2
acetylation	2
engineering	2
catalysis	2
tetrahydrofolate	2
rats	2
ubiquitination	2
mapping	2
cells	2
adhesion	2
translation	2
envelope	2
thermodynamics	2
eukaryotic	2
ontology	2
meiosis	2
methylation	2
neurobiology	2
dehydrogenase	2
transport	2
loss	2
viruses	2
bayes	2
essentiality	2
multiprotein	2
tumor	2
fish	1
primase	1
exchange	1
expressed	1
borrelia	1
falciparum	1
mutagenesis	1
caenorhabditis	1
retroviruses	1
linkage	1
oligomer	1
small	1
intelligence	1
hiv-1	1
repeat	1
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flavoproteins	1
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protein_domains	1
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oligonucleotide	1
robustness	1
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elegans	1
14-beta-cellobiosidase	1
repetitive	1
pipeline	1
dioxygenases	1
nf-kappa	1
hot	1
cellular	1
geography	1
genomic_analysis	1
topology	1
homomer	1
pdz	1
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markov	1
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somatic	1
matrix	1
desoxycorticosterone	1
statistical	1
steroid	1
zinc-finger	1
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uncertainty	1
self-organization	1
stoichiometry	1
vertebrates	1
transglutaminase	1
microarrays	1
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dna_recognition	1
module	1
pattern	1
networks	1
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ph	1
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mitosis	1
vesicular	1
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overlapping	1
deacetylation	1
nadp	1
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yeast	1
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synechococcus	1
molecule	1
decarboxylase	1
integrase	1
bioconductor	1
structural_genomics	1
suppressor	1
posttranslational	1
differentially_expressed_genes	1
modularity	1
divergence	1
structural_analysis	1
polarity	1
pathogen	1
hagfishes	1
mosaicism	1
crystallography	1
protease	1
resolvases	1
experimental	1
big_data	1
stability	1
telomere	1
genomic	1
lampreys	1
mistranslation	1
speciation	1
suchard	1
malarial_parasite	1
microbial	1
melanogaster	1
necrosis	1
p-450	1
evolvability	1
reaction	1
monte	1
r-package	1
stress	1
lamprey	1
systems_biology	1
unification	1
phosphorylation	1
ancestry	1
notch	1
genus_xanthomonas	1
trna_synthetases	1
reliability	1
hedgehog	1
interaction_networks	1
mass_spectometry	1
ribosomes	1
splicing	1
computational_analysis	1
pathway	1
archaeal	1
g-protein	1
datasets	1
synteny	1
biological_networks	1
technology	1
frameshift	1
protein_interaction	1
sirna	1
insect	1
orengo	1
neurodegenerative_diseases	1
alternative	1
ornithine	1
endosymbiosis	1
lymphocyte	1
helicase	1
rab1	1
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gastric	1
proteome	1
ketoglutaric	1
demethylation	1
strand	1
rearrangement	1
synthetic	1
mineralocorticoid	1
platypus	1
brain	1
chaperone	1
metabolic_pathways	1
mammals	1
retrotransposon	1
organelles	1
kinetics	1
remodeling	1
pepsin	1
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protozoa	1
missense	1
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misconduct	1
karyotype	1
group	1
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cycle	1
environmental	1
fishes	1
extracellular	1
alleles	1
hub	1
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cytochrome	1
cytokinesis	1
plasmodium	1
pan	1
molecular_pathways	1
iron	1
rrna	1
mice	1
bayesian	1
instability	1
capsid	1
ph_domain	1
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map	1
deletion	1
array	1
mvb12	1
tutorial	1
embryology	1
terminal	1
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lipid	1
guanine	1
tree	1
metabolic	1
lipoprotein	1
theorem	1
mathematics	1
glucocorticoid	1
oxidation-reduction	1
single-stranded	1
env	1
primers	1
videos	1
hydrocortisone	1
aldosterone	1
peptides	1
allosteric	1
effector	1
hiv	1
penicilin	1
gp120	1
lemur	1
static	1
hotspots	1
programming	1
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pupylation	1
microbiology	1
punctuated	1
rnase	1
red_queen	1
memory	1
transposases	1
breakpoint	1
nuclear_pore_complex	1
hypothesis	1
cellulose	1
biosynthesis	1
site-directed	1
endogenous	1
helminth	1
polymerases	1

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