robfsouza's superfamily [23 articles] Export

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	AAA+: A Class of Chaperone-Like ATPases Associated with the Assembly, Operation, and Disassembly of Protein Complexes [My Copy] Genome Research, Vol. 9, No. 1. (1 Jan 1999), pp. 27-43. by Andrew F. Neuwald, L. Aravind, John L. Spouge, Eugene V. Koonin posted to superfamily inactive enzyme chaperone atpase aravind by robfsouza on 2009-09-18 23:31:18 as along with 1 person leemary4
	The catalytic domains of thiamine triphosphatase and CyaB-like adenylyl cyclase define a novel superfamily of domains that bind organic phosphates [My Copy] BMC Genomics, Vol. 3, No. 1. (2002), 33. by Lakshminarayan Iyer, L. Aravind posted to superfamily protein inactive fold enzyme domain aravind by robfsouza on 2009-09-18 23:09:50 as
	Evolutionary genomics of the HAD superfamily: understanding the structural adaptations and catalytic diversity in a superfamily of phosphoesterases and allied enzymes. [My Copy] Journal of molecular biology, Vol. 361, No. 5. (1 Sep 2006), pp. 1003-1034. by A. Maxwell Burroughs, Karen N. Allen, Debra Dunaway-Mariano, L. Aravind posted to superfamily protein inactive fold evolution enzyme aravind by robfsouza on 2009-09-18 22:54:02 as along with 3 people martainn tny christiw
	DNA polymerase beta-like nucleotidyltransferase superfamily: identification of three new families, classification and evolutionary history [My Copy] Nucl. Acids Res., Vol. 27, No. 7. (1 Apr 1999), pp. 1609-1618. by L. Aravind, E. V. Koonin posted to superfamily polymerase inactive evolution enzyme dna aravind by robfsouza on 2009-09-18 22:48:32 as
	Novel Families of Putative Protein Kinases in Bacteria and Archaea: Evolution of the âEukaryoticâ Protein Kinase Superfamily [My Copy] Genome Research, Vol. 8, No. 10. (1 Oct 1998), pp. 1038-1047. by Christopher J. Leonard, L. Aravind, Eugene V. Koonin posted to superfamily protein kinase inactive fold enzyme aravind by robfsouza on 2009-09-18 22:42:18 as along with 3 people and 1 group anuragsethi thegoose2 tharris C. elegans / WormBase
	The NYN domains: novel predicted RNAses with a PIN domain-like fold. [My Copy] RNA biology, Vol. 3, No. 1. (r 2006), pp. 18-27. by Vivek Anantharaman, L. Aravind posted to superfamily rnase rna replication recombination fold family evolution domain aravind by robfsouza on 2009-09-04 17:08:43 as
	Toprim--a conserved catalytic domain in type IA and II topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins [My Copy] Nucl. Acids Res., Vol. 26, No. 18. (15 Sep 1998), pp. 4205-4213. by L. Aravind, D. D. Leipe, E. V. Koonin posted to topoisomerase superfamily replication protein family evolution domain chromosome chromatin atpase aravind by robfsouza on 2009-08-25 20:08:21 as
	A superfamily of archaeal, bacterial, and eukaryotic proteins homologous to animal transglutaminases [My Copy] PRS, Vol. 8, No. 08. (1999), pp. 1714-1719. by Kira S. Makarova, L. Aravind, Eugene V. Koonin posted to transglutaminase superfamily protein inactive enzyme aravind by robfsouza on 2009-08-20 22:47:02 as
	An Evolutionary Classification of the Metallo-\\ss-Lactamase Fold Proteins [My Copy] In Silico Biology, Vol. 1, No. 2. (1 Jan 1999), pp. 69-91. by L. Aravind posted to superfamily protein inactive fold evolutionary evolution enzyme classification carbohydrate binding aravind by robfsouza on 2009-08-20 22:29:53 as
	The AAA+ superfamily of functionally diverse proteins [My Copy] Genome Biol, Vol. 9, No. 4. (30 Apr 2008), 216. by Jamie Snider, Guillaume Thibault, Walid Houry posted to superfamily protein ntpase fold evolution enzyme atpase by robfsouza on 2009-08-11 21:02:39 as
	Efficient SCOP-fold classification and retrieval using index-based protein substructure alignments [My Copy] Bioinformatics, Vol. 25, No. 19. (1 Oct 2009), pp. 2559-2565. by Pin-Hao Chi, Bin Pang, Dmitry Korkin, Chi-Ren Shyu posted to superfamily structure protein methods method fold classification bioinformatics by robfsouza on 2009-08-11 16:55:01 as along with 2 people walshtp zwang
	Type II restriction endonuclease R.KpnI is a member of the HNH nuclease superfamily [My Copy] Nucl. Acids Res., Vol. 32, No. 20. (23 Nov 2004), pp. 6129-6135. by Matheshwaran Saravanan, Janusz M. Bujnicki, Iwona A. Cymerman, Desirazu N. Rao, Valakunja Nagaraja posted to endonuclease enzyme fold homology protein restriction structure superfamily by robfsouza on 2009-08-07 01:08:43 as
	SURVEY AND SUMMARY: Holliday junction resolvases and related nucleases: identification of new families, phyletic distribution and evolutionary trajectories [My Copy] Nucl. Acids Res., Vol. 28, No. 18. (15 Sep 2000), pp. 3417-3432. by L. Aravind, Kira S. Makarova, Eugene V. Koonin posted to superfamily resolvases protein inactive evolution enzyme endonuclease classification aravind by robfsouza on 2009-08-06 23:58:06 as along with 1 person johanviklund
	Structural and evolutionary classification of Type II restriction enzymes based on theoretical and experimental analyses [My Copy] Nucl. Acids Res., Vol. 36, No. 11. (1 Jun 2008), pp. 3552-3569. by Jerzy Orlowski, Janusz M. Bujnicki posted to analysis chromatin classification endonuclease enzyme evolution fold prediction recombination restriction sequence superfamily by robfsouza on 2009-08-06 23:55:35 as
	Evolutionary history and higher order classification of AAA+ ATPases [My Copy] Journal of Structural Biology In AAA+ Proteins: Based on Contributions to the 5th International Conference on AAA+ Proteins at Airlie House, Virginia, Vol. 146, No. 1-2. (Apr 2004), pp. 11-31. by Lakshminarayan M. Iyer, Detlef D. Leipe, Eugene V. Koonin, L. Aravind posted to superfamily p-loop inactive evolution enzyme atpase aravind aaa by robfsouza on 2009-07-21 16:26:00 as along with 2 people tny leemary4
	A novel family of P-loop NTPases with an unusual phyletic distribution and transmembrane segments inserted within the NTPase domain. [My Copy] Genome Biol, Vol. 5, No. 5. (2004) by L. Aravind, L. M. Iyer, D. D. Leipe, E. V. Koonin posted to aravind domain evolution fold ntpase p-loop protein superfamily by robfsouza on 2009-07-21 16:23:01 as along with 4 people and 3 groups thegoose2 tharris barry tny C. elegans / WormBase structural_bioinformatics Bioinformatics
	Origin and evolution of the archaeo-eukaryotic primase superfamily and related palm-domain proteins: structural insights and new members [My Copy] Nucl. Acids Res., Vol. 33, No. 12. (15 Jul 2005), pp. 3875-3896. by Lakshminarayan M. Iyer, Eugene V. Koonin, Detlef D. Leipe, L. Aravind posted to virus transcription superfamily primase inactive evolution eukaryote enzyme dna binding archaea aravind by robfsouza on 2009-07-18 02:41:07 as
	CDD: specific functional annotation with the Conserved Domain Database [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_1. (1 Jan 2009), pp. D205-210. by Aron Marchler-Bauer, John B. Anderson, Farideh Chitsaz, et al.Myra K. Derbyshire, Carol DeWeese-Scott, Jessica H. Fong, Lewis Y. Geer, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, Siqian He, David I. Hurwitz, John D. Jackson, Zhaoxi Ke, Christopher J. Lanczycki, Cynthia A. Liebert, Chunlei Liu, Fu Lu, Shennan Lu, Gabriele H. Marchler, Mikhail Mullokandov, James S. Song, Asba Tasneem, Narmada Thanki, Roxanne A. Yamashita, Dachuan Zhang, Naigong Zhang, Stephen H. Bryant posted to alignment classification database domain protein superfamily by robfsouza on 2009-05-18 19:23:38 as along with 4 people tomatoe45 dsmueller lptolik nlapalu
	Fold Change in Evolution of Protein Structures [My Copy] Journal of Structural Biology, Vol. 134, No. 2-3. (May 2001), pp. 167-185. by N. V. Grishin posted to classification evolution fold structure superfamily by robfsouza on 2009-05-15 01:58:54 as along with 8 people and 2 groups dfdong tomhebbron matzke ana barry pansapiens krishnaJCSG martainn structural_bioinformatics Bioinformatics
	Nothing about protein structure classification makes sense except in the light of evolution [My Copy] Current Opinion in Structural Biology, Vol. 19, No. 3. (24 Jun 2009), pp. 329-334. by Ruben E. Valas, Song Yang, Philip E. Bourne posted to network biological classification evolution fold protein structure superfamily by robfsouza on 2009-05-15 01:57:40 as along with 13 people and 3 groups dfdong mkotlyar skywalkerus02 dgront nyyu apaydin barry coela Zephyrus sobolevnrm zwang friendpine paulschlesinger structural_bioinformatics R.E.A.D baker-group
	Genomic and structural aspects of protein evolution. [My Copy] The Biochemical journal, Vol. 419, No. 1. (1 Apr 2009), pp. 15-28. by C. Chothia, J. Gough posted to network biological complexity domain duplication evolution genome protein structure superfamily by robfsouza on 2009-04-28 21:03:46 as
	An evolutionary treasure: unification of a broad set of amidohydrolases related to urease [My Copy] Proteins: Structure, Function, and Genetics, Vol. 28, No. 1. (1997), pp. 72-82. by Liisa Holm, Chris Sander posted to evolution fold protein structure superfamily by robfsouza on 2009-04-21 23:51:05 as
	The emergence of catalytic and structural diversity within the beta-clip fold [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 55, No. 4. (2004), pp. 977-991. by Lakshminarayan M. Iyer, L. Aravind posted to superfamily protein inactive fold evolution enzyme domain aravind by robfsouza on 2009-04-21 22:53:05 as

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14-beta-cellobiosidase	1

robfsouza's superfamily [23 articles] Export

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