CiteULike: roys's Bar-Joseph:Z [11 articles]

A Semi-Supervised Method for Predicting Transcription Factor–Gene Interactions in Escherichia coli

PLoS Comput Biol, Vol. 4, No. 3. (28 March 2008), e1000044.

by Jason Ernst, Qasim K. Beg, Krin A. Kay, Gábor Balázsi, Zoltán N. Oltvai, Ziv Bar-Joseph

posted to regulatory_networks ecoli classification by roys on 2009-10-20 06:10:16 as

along with 4 people tienholin nklee xili03 eskay

Cross species analysis of microarray expression data

Bioinformatics In Bioinformatics, Vol. 25, No. 12. (15 June 2009), pp. 1476-1483.

by Yong Lu, Peter Huggins, Ziv Bar-Joseph

posted to species_specific_nw comparative_genomics biological_networks by roys on 2009-10-16 22:39:39 as

along with 13 people and 1 group bsamal jfr daveGerrard ptrobajo guhjy yaredo shikin dswan renatomilani rdiaz thomaskelder natstreet druvus Bioinformatics

A Patient-Gene Model for Temporal Expression Profiles in Clinical Studies

Research in Computational Molecular Biology (2006), pp. 69-82.

by Naftali Kaminski, Ziv Bar-Joseph

posted to timeseries multiple_patient_data by roys on 2009-08-13 00:44:43 as

Continuous Representations of Time-Series Gene Expression Data

Journal of Computational Biology, Vol. 10, No. 3-4. (June 2003), pp. 341-356.

by Ziv Bar-Joseph, Georg K. Gerber, David K. Gifford, Tommi S. Jaakkola, Itamar Simon

posted to gene_expression spline timeseries by roys on 2009-07-20 19:14:34 as

Comparing the continuous representation of time-series expression profiles to identify differentially expressed genes

Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 18. (2 September 2003), pp. 10146-10151.

by Ziv Bar-Joseph, Georg Gerber, Itamar Simon, David K. Gifford, Tommi S. Jaakkola

posted to differential_expression gene_expression timeseries by roys on 2009-07-20 19:11:21 as

along with 1 person ugengma

Clustering short time series gene expression data

Bioinformatics, Vol. 21, No. suppl_1. (1 June 2005), pp. i159-168.

by Jason Ernst, Gerard J. Nau, Ziv Bar-Joseph

posted to expression_correlation timeseries by roys on 2009-07-20 18:58:38 as

along with 1 person diging_data

Analyzing time series gene expression data

Bioinformatics, Vol. 20, No. 16. (1 November 2004), pp. 2493-2503.

by Ziv Bar-Joseph

posted to gene_expression timeseries by roys on 2009-07-20 18:54:39 as

along with 1 person yaredo

Reconstructing dynamic regulatory maps

Molecular Systems Biology, Vol. 3 (16 January 2007)

by Jason Ernst, Oded Vainas, Christopher T. Harbison, Itamar Simon, Ziv Bar-Joseph

Backup in gene regulatory networks explains differences between binding and knockout results

Molecular Systems Biology, Vol. 5 (16 June 2009)

by Anthony Gitter, Zehava Siegfried, Michael Klutstein, et al.Oriol Fornes, Baldo Oliva, Itamar Simon, Ziv Bar-Joseph

posted to gene_expression protein-dna tfnet by roys on 2009-06-22 00:44:06 as

along with 6 people pablocarb cassj biomcgary kiekyon jjray TRHvidsten

Transcriptional Regulatory Networks in Saccharomyces cerevisiae

Science, Vol. 298, No. 5594. (25 October 2002), pp. 799-804.

Computational discovery of gene modules and regulatory networks

Nat Biotech, Vol. 21, No. 11. (12 October 2003), pp. 1337-1342.

by Ziv Bar-Joseph, Georg K. Gerber, Tong I. Lee, et al.Nicola J. Rinaldi, Jane Y. Yoo, Francois Robert, D. Benjamin Gordon, Ernest Fraenkel, Tommi S. Jaakkola, Richard A. Young, David K. Gifford

posted to tfnets tfprograms transcription_modules by roys on 2007-11-06 03:13:32 as

along with 17 people and 1 group meanerelk stharward myzhang wangbo Borelli ggrot dragonrez bayesian wnpx nickluscombe koller frohike karfunkel dquest balicea carlk tvdbulck EBI-regulation

	A Semi-Supervised Method for Predicting Transcription Factor–Gene Interactions in Escherichia coli [My Copy] PLoS Comput Biol, Vol. 4, No. 3. (28 March 2008), e1000044. by Jason Ernst, Qasim K. Beg, Krin A. Kay, Gábor Balázsi, Zoltán N. Oltvai, Ziv Bar-Joseph posted to regulatory_networks ecoli classification by roys on 2009-10-20 06:10:16 as along with 4 people tienholin nklee xili03 eskay
	Cross species analysis of microarray expression data [My Copy] Bioinformatics In Bioinformatics, Vol. 25, No. 12. (15 June 2009), pp. 1476-1483. by Yong Lu, Peter Huggins, Ziv Bar-Joseph posted to species_specific_nw comparative_genomics biological_networks by roys on 2009-10-16 22:39:39 as along with 13 people and 1 group bsamal jfr daveGerrard ptrobajo guhjy yaredo shikin dswan renatomilani rdiaz thomaskelder natstreet druvus Bioinformatics
	A Patient-Gene Model for Temporal Expression Profiles in Clinical Studies [My Copy] Research in Computational Molecular Biology (2006), pp. 69-82. by Naftali Kaminski, Ziv Bar-Joseph posted to timeseries multiple_patient_data by roys on 2009-08-13 00:44:43 as
	Continuous Representations of Time-Series Gene Expression Data [My Copy] Journal of Computational Biology, Vol. 10, No. 3-4. (June 2003), pp. 341-356. by Ziv Bar-Joseph, Georg K. Gerber, David K. Gifford, Tommi S. Jaakkola, Itamar Simon posted to gene_expression spline timeseries by roys on 2009-07-20 19:14:34 as
	Comparing the continuous representation of time-series expression profiles to identify differentially expressed genes [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 18. (2 September 2003), pp. 10146-10151. by Ziv Bar-Joseph, Georg Gerber, Itamar Simon, David K. Gifford, Tommi S. Jaakkola posted to differential_expression gene_expression timeseries by roys on 2009-07-20 19:11:21 as along with 1 person ugengma
	Clustering short time series gene expression data [My Copy] Bioinformatics, Vol. 21, No. suppl_1. (1 June 2005), pp. i159-168. by Jason Ernst, Gerard J. Nau, Ziv Bar-Joseph posted to expression_correlation timeseries by roys on 2009-07-20 18:58:38 as along with 1 person diging_data
	Analyzing time series gene expression data [My Copy] Bioinformatics, Vol. 20, No. 16. (1 November 2004), pp. 2493-2503. by Ziv Bar-Joseph posted to gene_expression timeseries by roys on 2009-07-20 18:54:39 as along with 1 person yaredo
	Reconstructing dynamic regulatory maps [My Copy] Molecular Systems Biology, Vol. 3 (16 January 2007) by Jason Ernst, Oded Vainas, Christopher T. Harbison, Itamar Simon, Ziv Bar-Joseph posted to condition_specific_nw condition_specific_response dynamics regulatory stress by roys on 2009-06-30 06:35:20 as along with 12 people and 1 group nicholasflann beete tienholin antonkratz behindtherabbit okarsligil aswin mikaelhuss SeungjoonOh berthoums natstreet jo_davies Bioinformatics
	Backup in gene regulatory networks explains differences between binding and knockout results [My Copy] Molecular Systems Biology, Vol. 5 (16 June 2009) by Anthony Gitter, Zehava Siegfried, Michael Klutstein, et al.Oriol Fornes, Baldo Oliva, Itamar Simon, Ziv Bar-Joseph posted to gene_expression protein-dna tfnet by roys on 2009-06-22 00:44:06 as along with 6 people pablocarb cassj biomcgary kiekyon jjray TRHvidsten
	Transcriptional Regulatory Networks in Saccharomyces cerevisiae [My Copy] Science, Vol. 298, No. 5594. (25 October 2002), pp. 799-804. by Tong I. Lee, Nicola J. Rinaldi, Francois Robert, et al.Duncan T. Odom, Ziv Bar-Joseph, Georg K. Gerber, Nancy M. Hannett, Christopher T. Harbison, Craig M. Thompson, Itamar Simon, Julia Zeitlinger, Ezra G. Jennings, Heather L. Murray, D. Benjamin Gordon, Bing Ren, John J. Wyrick, Jean-Bosco Tagne, Thomas L. Volkert, Ernest Fraenkel, David K. Gifford, Richard A. Young posted to network_motifs tfnets by roys on 2007-11-06 18:33:57 as along with 33 people and 2 groups frohike viren4388 mjoach kmdaily kinop junehlee lillo80 camster snuppepuppan icases forluvoft ggrot alokm opheliav samal sameetmehta cconboy koller jguinney franklin timflutre jpoyatos lusk nklee karfunkel mimulus_99 njcitulike brant kristallreiner Borelli Takayuki dquest siebert dbk-lab TNT
	Computational discovery of gene modules and regulatory networks [My Copy] Nat Biotech, Vol. 21, No. 11. (12 October 2003), pp. 1337-1342. by Ziv Bar-Joseph, Georg K. Gerber, Tong I. Lee, et al.Nicola J. Rinaldi, Jane Y. Yoo, Francois Robert, D. Benjamin Gordon, Ernest Fraenkel, Tommi S. Jaakkola, Richard A. Young, David K. Gifford posted to tfnets tfprograms transcription_modules by roys on 2007-11-06 03:13:32 as along with 17 people and 1 group meanerelk stharward myzhang wangbo Borelli ggrot dragonrez bayesian wnpx nickluscombe koller frohike karfunkel dquest balicea carlk tvdbulck EBI-regulation

roys's Bar-Joseph:Z [11 articles] Export

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