rsantana's optimization [70 articles] Export

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	Modularity optimization in community detection of complex networks [My Copy] EPL (Europhysics Letters), Vol. 87, No. 3. (2009), 38002. by X. S. Zhang, R. S. Wang, Y. Wang, et al.J. Wang, Y. Qiu, L. Wang, L. Chen posted to optimization network modularity graphs by rsantana on 2009-09-16 15:16:20 as along with 1 person Bolozna
	Genetic Algorithm for Optimization and Specification of a Neuron Model [My Copy] Engineering in Medicine and Biology Society, 2005. IEEE-EMBS 2005. 27th Annual International Conference of the In Engineering in Medicine and Biology Society, 2005. IEEE-EMBS 2005. 27th Annual International Conference of the (2005), pp. 4321-4323. by W. C. Gerken, L. K. Purvis, R. J. Butera posted to genetic-algorithms neuroscience optimization by rsantana on 2009-05-28 12:34:41 as
	Parameter estimation in single-compartment neuron models using a synchronization-based method [My Copy] Neurocomputing In Computational Neuroscience: Trends in Research 2007, Computational Neuroscience 2006, Vol. 70, No. 10-12. (June 2007), pp. 1605-1610. by D. Haufler, F. Morin, J. C. Lacaille, F. K. Skinner posted to neuroscience optimization by rsantana on 2009-05-28 12:31:57 as along with 1 person wvangeit
	A new graphical visualization of n-dimensional Pareto front for decision-making in multiobjective optimization [My Copy] Information Sciences, Vol. 178, No. 20. (15 October 2008), pp. 3908-3924. by X. Blasco, J. Herrero, J. Sanchis, M. Martinez posted to multiobjective optimization visualization by rsantana on 2009-05-28 12:24:09 as along with 2 people tdalon lmarti
	Community detection in complex networks using extremal optimization [My Copy] Physical Review E, Vol. 72, No. 2. (24 Aug 2005), 027104. by Jordi Duch, Alex Arenas posted to network optimization by rsantana on 2009-02-20 11:23:15 as along with 4 people and 1 group jmenche AaronMcDaid librain vtraag LIBrain
	Statistical mechanics of community detection [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 74, No. 1. (2006), 016110. by Jörg Reichardt, Stefan Bornholdt posted to ising network optimization by rsantana on 2009-02-20 11:07:54 as along with 7 people and 1 group tessonec hendysh Scis0000002 vtraag muraken lshaw hannu ThinkTank
	The Cross-Entropy Method: A Unified Approach to Combinatorial Optimization, Monte-Carlo Simulation and Machine Learning (Information Science and Statistics) [My Copy] (28 July 2004) by Reuven Y. Rubinstein, Dirk P. Kroese posted to entropy learning optimization by rsantana on 2009-02-17 23:01:59 as along with 2 people sugarexpletive abellogin
	Belief propagation : an asymptotically optimal algorithm for the random assignment problem [My Copy] (3 Feb 2009) by Justin Salez, Devavrat Shah posted to graphical-models optimization propagation by rsantana on 2009-02-06 08:57:46 as along with 3 people markusd jleny ansobol
	ENPDA: an evolutionary structure-based de novo peptide design algorithm [My Copy] Journal of Computer-Aided Molecular Design, Vol. 19, No. 8. (August 2005), pp. 585-601. by Ignasi Belda, Sergio Madurga, Xavier Llora, et al.Marc Martinell, Teresa Tarrago, Mireia Piqueras, Ernesto Nicolas, Ernest Giralt posted to bioinformatics edas optimization protein protein-design by rsantana on 2008-12-05 12:16:43 as along with 1 person peprovy
	MolDock: A New Technique for High-Accuracy Molecular Docking. [My Copy] J Med Chem, Vol. 49, No. 11. (1 June 2006), pp. 3315-3321. by R. Thomsen, M. H. Christensen posted to bioinformatics fitness optimization protein protein-design by rsantana on 2008-12-05 11:19:01 as along with 3 people and 1 group oteri BragilMassoud yongzhao TSRI_MGL
	Neurofitter: a parameter tuning package for a wide range of electrophysiological neuron models [My Copy] Frontiers in Neuroinformatics, Vol. 1, No. 1. (2007) by Werner Van Geit, Pablo Achard, Erik De Schutter posted to neuroscience optimization by rsantana on 2008-12-04 11:41:19 as along with 1 person wvangeit
	Automated neuron model optimization techniques: a review [My Copy] Biological Cybernetics, Vol. 99, No. 4. (1 November 2008), pp. 241-251. by W. Van Geit, E. De Schutter, P. Achard posted to neuroscience optimization by rsantana on 2008-12-04 11:34:36 as along with 1 person marekrud
	A Novel Multiple Objective Optimization Framework for Automated Constraining of Conductance-Based Neuron Models by Noisy Experimental Data [My Copy] Frontiers in Neuroscience, Vol. 1, No. 1. (2007), pp. 7-18. by S. Druckmann, Y. Banitt, A. Gideon, F. Schurmann, H. Markram, Segev posted to multiobjective neuroscience optimization by rsantana on 2008-12-04 11:33:05 as along with 2 people marekrud wvangeit
	Combining Global and Local Surrogate Models to Accelerate Evolutionary Optimization [My Copy] Systems, Man, and Cybernetics, Part C: Applications and Reviews, IEEE Transactions on In Systems, Man, and Cybernetics, Part C: Applications and Reviews, IEEE Transactions on, Vol. 37, No. 1. (2007), pp. 66-76. by Zongzhao Zhou, Yew S. Ong, Prasanth B. Nair, Andy J. Keane, Kai Y. Lum posted to evolutionary-computation fitness gaussian optimization by rsantana on 2008-12-03 11:19:57 as along with 1 person vbaudoui
	Comparison of graph cuts with belief propagation for stereo, using identical MRF parameters [My Copy] Computer Vision, 2003. Proceedings. Ninth IEEE International Conference on In Computer Vision, 2003. Proceedings. Ninth IEEE International Conference on (2003), pp. 900-906 vol.2. by M. F. Tappen, W. T. Freeman posted to markov-network optimization propagation vision by rsantana on 2008-10-18 13:43:34 as along with 1 person przem
	Efficient rotamer elimination applied to protein side-chains and related spin glasses. [My Copy] Biophys J, Vol. 66, No. 5. (May 1994), pp. 1335-1340. by R. F. Goldstein posted to decimation ising optimization protein sidechains by rsantana on 2008-03-30 22:45:01 as along with 6 people dfgreen dgront bluvsh1 kazemi mijam carlk
	Towards an integrated protein-protein interaction network: a relational markov network approach. [My Copy] J Comput Biol, Vol. 13, No. 2. (March 2006), pp. 145-164. by A. Jaimovich, G. Elidan, H. Margalit, N. Friedman posted to inference optimization propagation protein by rsantana on 2008-02-18 20:45:44 as along with 5 people and 1 group lfriedl wnpx nirfriedman koller iris_2001 kdl
	Optimization in Complex Networks [My Copy] Statistical Mechanics of Complex Networks (2003), pp. 114-126. by Ferrer, Ricard V. Solé posted to evolutionary-computation network optimization by rsantana on 2007-12-29 20:20:26 as along with 2 people balicea matteodellamico
	Robust optimization - A comprehensive survey [My Copy] Computer Methods in Applied Mechanics and Engineering, Vol. 196, No. 33-34. (1 July 2007), pp. 3190-3218. by Hans-Georg Beyer, Bernhard Sendhoff posted to evolutionary-computation heuristics optimization by rsantana on 2007-09-14 22:03:41 as along with 13 people and 6 groups jorgeac troussier avoregnitiv ansobol pdlug ddahlem pverstra quaranta nojhan dilbert hugoduncan lboussou jago EvolutionaryComputation Metaheuristics Optimization SORG Simulation of operations and interactions Optimisation Robuste - Robust Optimization
	Belief-Propagation for Weighted b-Matchings on Arbitrary Graphs and its Relation to Linear Programs with Integer Solutions [My Copy] (8 Sep 2007) by Mohsen Bayati, Christian Borgs, Jennifer Chayes, Riccardo Zecchina posted to graphs inference optimization propagation by rsantana on 2007-09-14 21:57:47 as along with 3 people ansobol daniel51 euclid
	Solving Constraint Satisfaction Problems through Belief Propagation-guided decimation [My Copy] (11 Sep 2007) by Andrea Montanari, Federico Ricci-Tersenghi, Guilhem Semerjian posted to constraints decimation inference optimization propagation by rsantana on 2007-09-14 21:55:01 as along with 2 people and 6 groups A_Olympia euclid Philosophy_of_Information Blog_and_Wiki_Research Algorithms metric_embeddings TCS Polytopes
	Genetic Particle Swarm Optimization Based on Estimation of Distribution [My Copy] Bio-Inspired Computational Intelligence and Applications (2007), pp. 287-296. by Jiahai Wang posted to edas optimization swarms by rsantana on 2007-08-29 16:32:37 as along with 1 person and 3 groups nojhan EvolutionaryComputation Metaheuristics Optimization
	Ensemble of surrogates [My Copy] Structural and Multidisciplinary Optimization, Vol. 33, No. 3. (March 2007), pp. 199-216. by Goel, Tushar, Haftka, et al. Raphael, Shyy, Wei, Queipo, Nestor posted to fitness multiobjective optimization partial-evaluation by rsantana on 2007-08-07 16:54:16 as along with 1 person kutabar
	The computational complexity of some classical problems from statistical physics [My Copy] (1990) by D. Welsh posted to complexity optimization by rsantana on 2007-07-24 12:31:22 as along with 3 people and 4 groups ansobol euclid gane5h Algorithms metric_embeddings TCS Polytopes
	Survey propagation as local equilibrium equations [My Copy] Journal of Statistical Mechanics: Theory and Experiment, Vol. 2004, No. 06. (2004) by Alfredo Braunstein, Riccardo Zecchina posted to cavity-method constraints inference optimization propagation by rsantana on 2007-07-24 11:01:21 as along with 3 people gkatsi john_ardelius pr-ism
	Survey propagation: an algorithm for satisfiability [My Copy] (4 Apr 2006) by A. Braunstein, M. Mezard, R. Zecchina posted to constraints graphical-models graphs optimization propagation by rsantana on 2007-07-24 10:58:16 as along with 2 people and 4 groups ansobol euclid Algorithms metric_embeddings TCS Polytopes
	Phase Transitions in Combinatorial Optimization Problems : Basics, Algorithms and Statistical Mechanics [My Copy] (04 November 2005) by Alexander K. Hartmann, Martin Weigt posted to clustering complexity constraints entropy frustration graphs inference optimization propagation sat by rsantana on 2007-07-23 10:27:57 as along with 3 people ansobol BarrosH fghorow
	Scalable Optimization via Probabilistic Modeling: From Algorithms to Applications (Studies in Computational Intelligence) [My Copy] (2006) by Martin Pelikan, Kumara Sastry, Erick Cant&\#250;-Paz posted to boa eda-theory edas entropy evolutionary-computation fda fitness ga-theory genetic-algorithms genetic-programming graphical-models kikuchi-approximations linkage optimization selection by rsantana on 2007-06-06 11:20:54 as
	An ant algorithm for the conformational analysis of flexible molecules [My Copy] Journal of Computational Chemistry, Vol. 9999, No. 9999. (2007), NA. by Frits Daeyaert, Marc De Jonge, Luc Koymans, Maarten Vinkers posted to aco bioinformatics optimization by rsantana on 2007-05-18 18:51:10 as along with 6 people and 1 group npt11tpn BragilMassoud gane5h samjlord jwagoner superpyrin moernerlab
	Some spin glass ideas applied to the clique problem [My Copy] (12 May 2006) by Antonio Iovanella, Benedetto Scoppola, Elisabetta Scoppola posted to cavity-method complexity graphs ising optimization by rsantana on 2007-04-27 09:30:50 as along with 4 people renatocarmo trunov ansobol gane5h
	Approximate inference and constrained optimization [My Copy] (2003) by T. Heskes, K. Albers, B. Kappen posted to constraints inference optimization propagation by rsantana on 2007-04-26 18:13:13 as
	Self Generating Metaheuristics in Bioinformatics: The Proteins Structure Comparison Case [My Copy] pp. 181-201. by N. Krasnogor posted to bioinformatics optimization protein by rsantana on 2007-04-17 10:21:31 as
	Combinatorial Optimization : Algorithms and Complexity [My Copy] (07 July 1998) by Christos H. Papadimitriou, Kenneth Steiglitz posted to complexity optimization by rsantana on 2007-03-23 18:52:50 as along with 12 people djlin danielamaral gale82 ansobol dariusb gdv greenw BarrosH pcarbo fghorow gagliol nilton
	Swarms on Continuous Data [My Copy] by Vitorino Ramos, Ajith Abraham posted to optimization swarms by rsantana on 2007-03-09 10:58:05 as along with 5 people and 22 groups yish vitorinoramos kdiwold cliveholtham ianturton structural_bioinformatics NeuronDynamics MathBio MemeticAlgorithms Computational-Genomics Pattern-Analysis Semantic-Social-Networks Ubicomp InformationRetrieval Bioinformatics mathgamespatterns Computational_Systems_Biology LocationAwareComputing dtl vds-arg SwarmCompBio aLifeComplexSys Artificial-Immune-Systems Cybernetics EvolutionaryComputation GenerativeArt eni
	Metaheuristics in combinatorial optimization: Overview and conceptual comparison [My Copy] ACM Comput. Surv., Vol. 35, No. 3. (September 2003), pp. 268-308. by Christian Blum, Andrea Roli posted to optimization by rsantana on 2007-03-09 10:27:51 as along with 12 people and 7 groups dowlingj naveer danielamaral kutabar yish BarrosH ddahlem craigtalbert nojhan ilapla lop pverstra mathgamespatterns dtl vds-arg EvolutionaryComputation eni Metaheuristics Optimization
	Evolutionary design and multiobjective optimisation [My Copy] (1998) by D. Cvetkovic, I. Parmee posted to multiobjective optimization by rsantana on 2007-03-09 10:27:15 as along with 1 person kutabar
	A double-distribution statistical algorithm for composite laminate optimization [My Copy] Structural and Multidisciplinary Optimization by Laurent Grosset, Rodolphe Riche, Raphael T. Haftka posted to optimization edas by rsantana on 2007-01-29 19:44:50 as along with 1 person and 3 groups nojhan EvolutionaryComputation Metaheuristics Optimization
	Side chain placement using estimation of distribution algorithms [My Copy] Artificial Intelligence in Medicine, Vol. 39, No. 1. (January 2007), pp. 49-63. by Roberto Santana, Pedro Larranaga, Jose A. Lozano posted to sidechains rotamers protein optimization edas bioinformatics by rsantana on 2006-12-21 15:19:01 as along with 2 people mijam carlk
	Globally Multimodal Problem Optimization Via an Estimation of Distribution Algorithm Based on Unsupervised Learning of Bayesian Networks [My Copy] Evolutionary Computation, Vol. 13, No. 1. (January 2005), pp. 43-66. by J. Pena, J. Lozano posted to bayesian-edas edas optimization by rsantana on 2006-12-21 10:11:59 as
	Drift and Scaling in Estimation of Distribution Algorithms [My Copy] Evolutionary Computation, Vol. 13, No. 1. (January 2005), pp. 99-123. by J. Shapiro posted to eda-theory edas optimization by rsantana on 2006-12-21 10:10:23 as
	Space Complexity of Estimation of Distribution Algorithms [My Copy] Evolutionary Computation, Vol. 13, No. 1. (January 2005), pp. 125-143. by Yong Gao, Joseph Culberson posted to eda-theory edas optimization by rsantana on 2006-12-21 10:09:09 as
	Approximate inference for side-chain prediction [My Copy] (2004) by C. Yanover, Y. Weiss posted to bioinformatics optimization propagation protein by rsantana on 2006-12-20 19:22:37 as
	Finding the M most probable configurations using loopy belief propagation [My Copy] In Advances in {N}eural {I}nformation {P}rocessing {S}ystems 16 (2004) by C. Yanover, Y. Weiss edited by S. Thrun, L. Saul, B. schölkopf posted to max-configurations optimization propagation by rsantana on 2006-12-20 19:22:37 as
	GEM: A Gaussian evolutionary method for predicting protein side-chain conformations [My Copy] Protein Science, Vol. 11 (2002), pp. 1897-1907. by Jinn M. Yang, Chi H. Tsai, Ming J. Hwang, Huai K. Tsai, Jenn K. Hwang, Cheng Y. Kao posted to protein optimization gaussian evolutionary-computation by rsantana on 2006-12-20 19:22:37 as
	Dynamic weighting in Monte Carlo and optimization [My Copy] Applied Mathematics. Proceedings of the National Academic of Science, Vol. 94 (December 1997), pp. 14220-14224. by Wing H. Wong, Faming Liang posted to sampling optimization by rsantana on 2006-12-20 19:22:37 as
	Automatic protein design with all atom force-fields by exact and heuristic optimization [My Copy] Journal of Molecular Biology, Vol. 301, No. 3. (2000), pp. 713-736. by L. Wernisch, S. Hery, S. Wodak posted to protein optimization by rsantana on 2006-12-20 19:22:37 as
	Global Optimization of Clusters, Crystals, and Biomolecules [My Copy] Science, Vol. 285, No. 5432. (1999) by David J. Wales, Harold A. Scheraga posted to region-graphs optimization bioinformatics by rsantana on 2006-12-20 19:22:37 as
	Searching for folded proteins in vitro and in silico [My Copy] European Journal of Biochemistry, Vol. 271, No. 9. (2004), pp. 1615-1622. by A. L. Watters, D. Baker posted to protein optimization by rsantana on 2006-12-20 19:22:37 as
	Trading accuracy for speed: A quantitative comparison of search algorithms in protein sequence design [My Copy] Journal of Molecular Biology, Vol. 299, No. 3. (2000), pp. 799-803. by C. A. Voigt, D. B. Gordon, S. L. Mayo posted to protein optimization by rsantana on 2006-12-20 19:22:37 as
	Modeling side-chain conformation [My Copy] Current Opinion in Structural Biology, Vol. 6, No. 2. (1996), pp. 217-221. by M. Vasquez posted to protein optimization by rsantana on 2006-12-20 19:22:37 as

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bibtex-import	329
edas	185
protein	110
genetic-algorithms	92
graphical-models	82
optimization	70
propagation	59
eda-theory	53
bioinformatics	47
learning	47
ga-theory	44
bayesian-edas	40
kikuchi-approximations	39
graphs	35
inference	34
region-graphs	33
complexity	31
entropy	31
network	27
tree	24
boa	23
fitness	19
bayesian	18
clustering	18
mixtures	18
evolutionary-computation	17
umda	17
bayesian-networks	16
continuous-edas	16
fda	16
sampling	15
markov-network	13
constraints	12
multiobjective	11
protein-design	11
partial-evaluation	10
rotamers	10
sidechains	10
approximations	9
linkage	9
neuroscience	9
factor-graphs	8
interactions	8
selection	8
genetic-programming	7
hp-model	7
markov-chains	7
modularity	7
pada	7
classifier-systems	6
data-mining	6
ising	6
mean-field	6
sat	6
adaptation	5
monte-carlo	5
turing-machines	5
aco	4
frustration	4
gaussian	4
markov-fields	4
pbil	4
schema-theory	4
testors	4
vision	4
genetics	3
gibbs-sampling	3
ipf	3
mateda	3
neural-networks	3
pattern-recognition	3
snps	3
bmda	2
cavity-method	2
classifiers	2
decimation	2
dynamic-problems	2
heuristics	2
mutation	2
neighborhood-search	2
r	2
reinforcement-learning	2
second-life	2
software	2
swarms	2
testor	2
turing-machine	2
unitation-functions	2
visualization	2
vns	2
artificial-life	1
ba	1
causality	1
chordal-graphs	1
circuit-reconstruction	1
damping	1
dimensionality-reduction	1
dynamic-optimization	1
ecga	1
fuzzy	1
ica	1
inf	1
max-configurations	1
mdl	1
philosophy	1
qsar	1
random-forests	1
realizability	1
rna	1
robotics	1
spanish	1
tabu-search	1
thesis	1
time-continuation	1
xcs	1

rsantana's optimization [70 articles] Export

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