rsantana's rotamers [10 articles] Export

Recent papers added to rsantana's library classified by the tag rotamers. You can also see everyone's rotamers.

	Fast procedure for reconstruction of full-atom protein models from reduced representations. [My Copy] Journal of computational chemistry, Vol. 29, No. 9. (15 July 2008), pp. 1460-1465. by Piotr Rotkiewicz, Jeffrey Skolnick posted to bioinformatics protein rotamers by rsantana on 2009-02-07 11:23:36 as along with 5 people Gabriel439 sebk apaydin mijam middledomain
	Differentiable, multi-dimensional, knowledge-based energy terms for torsion angle probabilities and propensities [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2008), NA. by El-Ad D. Amir, Nir Kalisman, Chen Keasar posted to bioinformatics protein rotamers by rsantana on 2009-02-07 11:14:31 as along with 2 people dgront mijam
	Conformational analysis of the backbone-dependent rotamer preferences of protein sidechains. [My Copy] Nat Struct Biol, Vol. 1, No. 5. (May 1994), pp. 334-340. by R. L. Dunbrack, M. Karplus posted to protein rotamers sidechains by rsantana on 2007-10-26 23:41:38 as along with 3 people and 1 group nknii kazemi jwm TCR_Signaling
	Side-chain flexibility in protein-ligand binding: the minimal rotation hypothesis. [My Copy] Protein science : a publication of the Protein Society, Vol. 14, No. 4. (April 2005), pp. 1104-1114. by M. I. Zavodszky, L. A. Kuhn posted to protein rotamers sidechains by rsantana on 2007-09-27 18:52:24 as along with 9 people and 2 groups fl ramensky BragilMassoud dgruiz yongzhao nknii blackbart kazemi LamBras TCR_Signaling TSRI_MGL
	Bayesian statistical analysis of protein side-chain rotamer preferences. [My Copy] Protein Sci, Vol. 6, No. 8. (August 1997), pp. 1661-1681. by R. L. Dunbrack, F. E. Cohen posted to sidechains rotamers protein bayesian by rsantana on 2007-02-09 19:49:45 as along with 12 people and 2 groups karbak nknii j3xucite dgront blackbart kazemi hmk LamBras mijam jwm phoenixzxl zwang MuraLab TCR_Signaling
	A graph-theory algorithm for rapid protein side-chain prediction. [My Copy] Protein Sci, Vol. 12, No. 9. (September 2003), pp. 2001-2014. by A. A. Canutescu, A. A. Shelenkov, R. L. Dunbrack posted to sidechains rotamers protein bayesian by rsantana on 2007-02-09 19:49:22 as along with 11 people oceanwind mcbla karbak nigham bicko blackbart bluvsh1 mijam jwm carlk newton1234
	Rotamer libraries in the 21st century. [My Copy] Current opinion in structural biology, Vol. 12, No. 4. (August 2002), pp. 431-440. by Roland L. Dunbrack posted to sidechains rotamers protein bayesian by rsantana on 2007-02-09 19:49:01 as along with 9 people and 1 group bmduggan yongzhao dgront blackbart kazemi medic0747 LamBras mijam jwm TSRI_MGL
	Improved modeling of side-chains in proteins with rotamer-based methods: A flexible rotamer model [My Copy] Proteins: Structure, Function, and Genetics, Vol. 37, No. 4. (1999), pp. 530-543. by Joaquim Mendes, António M. Baptista, Maria A. Carrondo, Cláudio M. Soares posted to protein rotamers sidechains by rsantana on 2007-02-09 19:41:44 as along with 2 people dfgreen apaydin
	Exact rotamer optimization for protein design. [My Copy] J Comput Chem, Vol. 24, No. 2. (30 January 2003), pp. 232-243. by D. B. Gordon, G. K. Hom, S. L. Mayo, N. A. Pierce posted to protein-design rotamers by rsantana on 2007-02-09 19:39:44 as along with 1 person bluvsh1
	Side chain placement using estimation of distribution algorithms [My Copy] Artificial Intelligence in Medicine, Vol. 39, No. 1. (January 2007), pp. 49-63. by Roberto Santana, Pedro Larranaga, Jose A. Lozano posted to sidechains rotamers protein optimization edas bioinformatics by rsantana on 2006-12-21 15:19:01 as along with 2 people mijam carlk

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bibtex-import	329
edas	185
protein	110
genetic-algorithms	92
graphical-models	82
optimization	70
propagation	59
eda-theory	53
learning	47
bioinformatics	47
ga-theory	44
bayesian-edas	40
kikuchi-approximations	39
graphs	35
inference	34
region-graphs	33
entropy	31
complexity	31
network	27
tree	24
boa	23
fitness	19
bayesian	18
clustering	18
mixtures	18
evolutionary-computation	17
umda	17
continuous-edas	16
fda	16
bayesian-networks	16
sampling	15
markov-network	13
constraints	12
protein-design	11
multiobjective	11
partial-evaluation	10
rotamers	10
sidechains	10
neuroscience	9
linkage	9
approximations	9
factor-graphs	8
selection	8
interactions	8
pada	7
markov-chains	7
genetic-programming	7
modularity	7
hp-model	7
data-mining	6
classifier-systems	6
sat	6
mean-field	6
ising	6
adaptation	5
turing-machines	5
monte-carlo	5
schema-theory	4
markov-fields	4
testors	4
pbil	4
aco	4
frustration	4
gaussian	4
vision	4
pattern-recognition	3
snps	3
mateda	3
genetics	3
ipf	3
neural-networks	3
gibbs-sampling	3
software	2
swarms	2
bmda	2
r	2
vns	2
reinforcement-learning	2
cavity-method	2
mutation	2
classifiers	2
testor	2
neighborhood-search	2
second-life	2
unitation-functions	2
turing-machine	2
visualization	2
decimation	2
dynamic-problems	2
heuristics	2
fuzzy	1
dynamic-optimization	1
time-continuation	1
thesis	1
rna	1
damping	1
dimensionality-reduction	1
inf	1
ba	1
realizability	1
philosophy	1
causality	1
xcs	1
ecga	1
ica	1
mdl	1
spanish	1
circuit-reconstruction	1
tabu-search	1
random-forests	1
robotics	1
max-configurations	1
chordal-graphs	1
artificial-life	1
qsar	1

rsantana's rotamers [10 articles] Export

rsantana's tags