BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments. Export

@article{citeulike:809031, abstract = {We present a new version of Babelomics, a complete suite of web tools for functional analysis of genome-scale experiments, with new and improved tools. New functionally relevant terms have been included such as CisRed motifs or bioentities obtained by text-mining procedures. An improved indexing has considerably speeded up several of the modules. An improved version of the FatiScan method for studying the coordinate behaviour of groups of functionally related genes is presented, along with a similar tool, the Gene Set Enrichment Analysis. Babelomics is now more oriented to test systems biology inspired hypotheses. Babelomics can be found at http://www.babelomics.org.}, address = {Bioinformatics Department, Centro de Investigaci\'{o}n Pr\'{\i}ncipe Felipe, Autopista del Saler 16, E-46013, Valencia, Spain.}, author = {Al-Shahrour, F\'{a}tima and Minguez, Pablo and T\'{a}rraga, Joaqu\'{\i}n and Montaner, David and Alloza, Eva and Vaquerizas, Juan M. and Conde, Luc\'{\i}a and Blaschke, Christian and Vera, Javier and Dopazo, Joaqu\'{\i}n}, citeulike-article-id = {809031}, citeulike-linkout-0 = {http://dx.doi.org/10.1093/nar/gkl172}, citeulike-linkout-1 = {http://nar.oxfordjournals.org/cgi/content/abstract/34/suppl_2/W472}, citeulike-linkout-2 = {http://view.ncbi.nlm.nih.gov/pubmed/16845052}, citeulike-linkout-3 = {http://www.hubmed.org/display.cgi?uids=16845052}, day = {1}, doi = {10.1093/nar/gkl172}, issn = {1362-4962}, journal = {Nucleic acids research}, keywords = {babelomics, functional-genomics, gene-ontology, web-tool}, month = {July}, number = {Web Server issue}, pages = {W472--476}, posted-at = {2009-05-31 07:44:10}, priority = {2}, title = {BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments.}, url = {http://dx.doi.org/10.1093/nar/gkl172}, volume = {34}, year = {2006} }

TY - JOUR ID - citeulike:809031 L3 - citeulike-article-id:809031 N2 - We present a new version of Babelomics, a complete suite of web tools for functional analysis of genome-scale experiments, with new and improved tools. New functionally relevant terms have been included such as CisRed motifs or bioentities obtained by text-mining procedures. An improved indexing has considerably speeded up several of the modules. An improved version of the FatiScan method for studying the coordinate behaviour of groups of functionally related genes is presented, along with a similar tool, the Gene Set Enrichment Analysis. Babelomics is now more oriented to test systems biology inspired hypotheses. Babelomics can be found at http://www.babelomics.org. IS - Web Server issue JF - Nucleic acids research SN - 1362-4962 AD - Bioinformatics Department, Centro de Investigación Príncipe Felipe, Autopista del Saler 16, E-46013, Valencia, Spain. EP - 476 TI - BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments. VL - 34 SP - W472 KW - babelomics KW - functional-genomics KW - gene-ontology KW - web-tool AU - Al-Shahrour, Fátima AU - Minguez, Pablo AU - Tárraga, Joaquín AU - Montaner, David AU - Alloza, Eva AU - Vaquerizas, Juan AU - Conde, Lucía AU - Blaschke, Christian AU - Vera, Javier AU - Dopazo, Joaquín PY - 2006/07/01/ UR - http://dx.doi.org/10.1093/nar/gkl172 ER -