CiteULike: ruvido's Caflisch:A [4 articles]

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	One-Dimensional Barrier-Preserving Free-Energy Projections of a β-sheet Miniprotein: New Insights into the Folding Process [My Copy] The Journal of Physical Chemistry B, Vol. 112, No. 29. (1 July 2008), pp. 8701-8714. by Sergei V. Krivov, Stefanie Muff, Amedeo Caflisch, Martin Karplus posted to profile md landscape folding by ruvido on 2009-09-24 14:26:46 as
	Phi-value analysis by molecular dynamics simulations of reversible folding. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 3. (18 January 2005), pp. 628-633. by G. Settanni, F. Rao, A. Caflisch posted to folding md simulation state transition tse by ruvido on 2006-12-19 14:19:12 as along with 2 people apaydin allmensch
	Local modularity measure for network clusterizations [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 72, No. 5. (2005) by Stefanie Muff, Francesco Rao, Amedeo Caflisch posted to clusterization complex modularity network by ruvido on 2006-12-19 13:50:37 as
	The protein folding network. [My Copy] J Mol Biol, Vol. 342, No. 1. (3 September 2004), pp. 299-306. by F. Rao, A. Caflisch posted to folding md network simulation state transition tse by ruvido on 2006-12-19 09:59:53 as along with 6 people and 1 group camster apaydin allmensch jlh64 nh Diego_Prada dbk-lab

chapter	60
ppi	44
dynamics	34
protein	32
allostery	30
dhfr	25
subdiffusion	24
water	22
energy_landscape	19
enzyme	18
folding	18
kinetics	17
review	17
free-energy	16
cap	15
simulation	15
binding	14
catalysis	13
protein-interactions	12
nmr	11
hierarchy	10
population_shifts	10
fractals	10
genome	9
hemoglobin	8
md	8
network	8
experimental	7
conformation	7
cap_dna	7
gpu	7
random_walk	7
models	6
ligands	6
dna	6
xray	5
motion	5
transition	5
mutations	5
clusterization	4
d4	4
tmd	4
chemistry	4
entropy	4
docking	4
molecular_dynamics	4
myoglobin	4
shaw	4
algorithm	4
dihedrals	3
relaxation_dispersion	3
thermodynamics	3
normal_modes	3
channel	3
acetyl	3
nma	3
structure	3
vibrational_modes	3
networks	3
denatured	2
alaninedipeptide	2
kinases	2
state	2
landscape	2
temperature	2
tse	2
barrier	2
capri	2
mwc	2
x-ray	2
flory	2
complex	2
spectroscopy	2
side-chains	2
database	2
ferrys_law	1
other	1
wall	1
moore	1
flexibility	1
b-factors	1
qmm	1
asimmetry	1
gene_fusion	1
alanine__scanning	1
pca	1
target	1
proteins	1
book	1
markov	1
molecular	1
system-biology	1
religion	1
history	1
pathways	1
analysis	1
pmf	1
homology_modelling	1
cyclophilin	1
master_equation	1
prediction	1
rna	1
profile	1
sampling	1
clustering	1
biology	1
computation	1
physics	1
solvation	1
rmsd_restraints	1
rubik	1
psichology	1
homology	1
computational	1
cups	1
remd	1
community	1
modularity	1
physical_chemistry	1
charmm	1
comparison	1

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