ruvido's Karplus:M [14 articles] Export

Recent papers posted to ruvido's library by the author Karplus:M. You can also see everyone's Karplus:M.

	One-Dimensional Barrier-Preserving Free-Energy Projections of a β-sheet Miniprotein: New Insights into the Folding Process [My Copy] The Journal of Physical Chemistry B, Vol. 112, No. 29. (1 July 2008), pp. 8701-8714. by Sergei V. Krivov, Stefanie Muff, Amedeo Caflisch, Martin Karplus posted to profile md landscape folding by ruvido on 2009-09-24 14:26:46 as
	Intrinsic motions along an enzymatic reaction trajectory. [My Copy] Nature, Vol. 450, No. 7171. (6 December 2007), pp. 838-844. by Katherine A. Henzler-Wildman, Vu Thai, Ming Lei, et al.Maria Ott, Magnus Wolf-Watz, Tim Fenn, Ed Pozharski, Mark A. Wilson, Gregory A. Petsko, Martin Karplus, Christian G. Hübner, Dorothee Kern posted to dynamics energy_landscape enzyme protein by ruvido on 2008-10-31 13:45:36 as along with 12 people and 1 group saravan ahmetbakan xdeupi ubcg08l barry aqeel ebeutler cactus sobolevnrm paulschlesinger jlh64 yalexeev baker-group
	A hierarchy of timescales in protein dynamics is linked to enzyme catalysis [My Copy] Nature (18 November 2007) by Katherine A. Henzler-Wildman, Ming Lei, Vu Thai, Jordan S. Kerns, Martin Karplus, Dorothee Kern posted to dynamics energy_landscape enzyme protein by ruvido on 2008-10-31 13:44:58 as along with 9 people and 1 group Diego_Prada tmmurali allmensch cactus sobolevnrm jlh64 RamuAnandakrishnan dmobley chenway baker-group
	Ion transport in a model gramicidin channel. Structure and thermodynamics. [My Copy] Biophys. J., Vol. 59, No. 5. (1 May 1991), pp. 961-981. by B. Roux, M. Karplus posted to channel by ruvido on 2008-10-23 13:52:50 as
	Molecular Dynamics Simulations of the Gramicidin Channel [My Copy] Annual Review of Biophysics and Biomolecular Structure, Vol. 23, No. 1. (1994), pp. 731-761. by B. Roux, M. Karplus posted to channel md by ruvido on 2008-10-23 13:41:59 as
	Allostery and cooperativity revisited [My Copy] Protein Sci, Vol. 17, No. 8. (1 August 2008), pp. 1295-1307. by Qiang Cui, Martin Karplus posted to allostery dynamics protein by ruvido on 2008-09-12 11:20:02 as along with 3 people sdbneuro agrossfield tny
	Dynamic Distance Disorder in Proteins Is Caused by Trapping [My Copy] J. Phys. Chem. B, Vol. 110, No. 19. (18 May 2006), pp. 9363-9367. by G. Luo, I. Andricioaei, X. S. Xie, M. Karplus posted to dynamics protein subdiffusion by ruvido on 2008-09-04 15:01:00 as along with 1 person allmensch
	Dynamics of ligand binding to heme proteins [My Copy] Journal of Molecular Biology, Vol. 132, No. 3. (15 August 1979), pp. 343-368. by D. A. Case, M. Karplus posted to binding energy_landscape by ruvido on 2008-02-28 10:13:42 as along with 1 person Diego_Prada
	The Allosteric Mechanism of Yeast Chorismate Mutase: A Dynamic Analysis [My Copy] Journal of Molecular Biology, Vol. 356, No. 1. (10 February 2006), pp. 237-247. by Yifei Kong, Jianpeng Ma, Martin Karplus, William N. Lipscomb posted to allostery tmd by ruvido on 2008-02-22 12:05:19 as along with 2 people and 2 groups barry higueruelo structural_bioinformatics Bioinformatics
	Multiple conformational states of proteins: a molecular dynamics analysis of myoglobin [My Copy] Science, Vol. 235, No. 4786. (16 January 1987), pp. 318-321. by R. Elber, M. Karplus posted to energy_landscape molecular_dynamics myoglobin by ruvido on 2007-05-08 18:22:04 as along with 1 person dfgreen
	Aspects of Protein Reaction Dynamics: Deviations from Simple Behavior [My Copy] The Journal of Physical Chemistry B, Vol. 104, No. 1. (1 January 2000), pp. 11-27. by Martin Karplus posted to hemoglobin kinetics by ruvido on 2007-02-27 17:40:44 as along with 3 people proposals yalexeev Diego_Prada
	Simulation of conformational transitions by the restricted perturbation-targeted molecular dynamics method. [My Copy] J Chem Phys, Vol. 122, No. 11. (15 March 2005) by A. van der Vaart, M. Karplus posted to dihedrals folding md protein target transition by ruvido on 2006-12-22 11:26:26 as along with 1 person nigham
	Folding time distributions as an approach to protein folding kinetics. [My Copy] J Phys Chem B Condens Matter Mater Surf Interfaces Biophys, Vol. 109, No. 11. (2005), pp. 5312-30. by S. F. Chekmarev, S. V. Krivov, M. Karplus posted to dhfr by ruvido on 2006-12-19 14:24:48 as
	Folding of ubiquitin: a simple model describes the strange kinetics. [My Copy] J Phys Chem B Condens Matter Mater Surf Interfaces Biophys, Vol. 110, No. 17. (2006), pp. 8865-9. by S. F. Chekmarev, S. V. Krivov, M. Karplus posted to dhfr by ruvido on 2006-12-19 14:24:47 as

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chapter	60
ppi	44
dynamics	34
protein	32
allostery	30
dhfr	25
subdiffusion	24
water	22
energy_landscape	19
enzyme	18
folding	18
kinetics	17
review	17
free-energy	16
cap	15
simulation	15
binding	14
catalysis	13
protein-interactions	12
nmr	11
hierarchy	10
population_shifts	10
fractals	10
genome	9
hemoglobin	8
md	8
network	8
experimental	7
conformation	7
cap_dna	7
gpu	7
random_walk	7
models	6
ligands	6
dna	6
xray	5
motion	5
transition	5
mutations	5
clusterization	4
d4	4
tmd	4
chemistry	4
entropy	4
docking	4
molecular_dynamics	4
myoglobin	4
shaw	4
algorithm	4
dihedrals	3
relaxation_dispersion	3
thermodynamics	3
normal_modes	3
channel	3
acetyl	3
nma	3
structure	3
vibrational_modes	3
networks	3
denatured	2
alaninedipeptide	2
kinases	2
state	2
landscape	2
temperature	2
tse	2
barrier	2
capri	2
mwc	2
x-ray	2
flory	2
complex	2
spectroscopy	2
side-chains	2
database	2
ferrys_law	1
other	1
wall	1
moore	1
flexibility	1
b-factors	1
qmm	1
asimmetry	1
gene_fusion	1
alanine__scanning	1
pca	1
target	1
proteins	1
book	1
markov	1
molecular	1
system-biology	1
religion	1
history	1
pathways	1
analysis	1
pmf	1
homology_modelling	1
cyclophilin	1
master_equation	1
prediction	1
rna	1
profile	1
sampling	1
clustering	1
biology	1
computation	1
physics	1
solvation	1
rmsd_restraints	1
rubik	1
psichology	1
homology	1
computational	1
cups	1
remd	1
community	1
modularity	1
physical_chemistry	1
charmm	1
comparison	1

ruvido's Karplus:M [14 articles] Export

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