ruvido's cap [15 articles] Export

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	Charge neutralization and DNA bending by the Escherichia coli catabolite activator protein [My Copy] Nucl. Acids Res., Vol. 30, No. 9. (1 May 2002), pp. 1879-1885. by Philip R. Hardwidge, Jeff M. Zimmerman, Maher posted to cap cap_dna dna protein by ruvido on 2008-09-15 11:00:24 as along with 1 person onufriev
	Catabolite activator protein: DNA binding and transcription activation [My Copy] Current Opinion in Structural Biology, Vol. 14, No. 1. (February 2004), pp. 10-20. by Catherine L. Lawson, David Swigon, Katsuhiko S. Murakami, Seth A. Darst, Helen M. Berman, Richard H. Ebright posted to allostery cap cap_dna protein review by ruvido on 2008-09-15 10:56:08 as
	Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: alteration of DNA binding specificity through alteration of DNA kinking [My Copy] Journal of Molecular Biology, Vol. 314, No. 1. (16 November 2001), pp. 75-82. by Shengfeng Chen, Angelo Gunasekera, Xiaoping Zhang, Thomas A. Kunkel, Richard H. Ebright, Helen M. Berman posted to allostery cap cap_dna protein by ruvido on 2008-09-15 10:54:44 as
	Structure of the CAP-DNA Complex at 2.5 Å Resolution: A Complete Picture of the Protein-DNA Interface [My Copy] Journal of Molecular Biology, Vol. 260, No. 3. (19 July 1996), pp. 395-408. by Gary Parkinson, Christopher Wilson, Angelo Gunasekera, Yon W. Ebright, Richard E. Ebright, Helen M. Berman posted to allostery cap cap_dna protein by ruvido on 2008-09-15 10:54:00 as
	Kinetic and Structural Studies of the Allosteric Conformational Changes Induced by Binding of cAMP to the cAMP Receptor Protein from Escherichia coli [My Copy] Biochemistry, Vol. 45, No. 2. (17 January 2006), pp. 373-380. by E. Fic, A. Polit, Z. Wasylewski posted to cap kinetics by ruvido on 2008-05-27 15:43:50 as
	Catabolite Activator Protein in Aqueous Solution: A Molecular Simulation Study [My Copy] J. Phys. Chem. B, Vol. 111, No. 6. (15 February 2007), pp. 1496-1501. by M. Berrera, S. Pantano, P. Carloni posted to allostery cap dna by ruvido on 2008-03-11 07:39:36 as
	Role of residue 138 in the interdomain hinge region in transmitting allosteric signals for DNA binding in Escherichia coli cAMP receptor protein. [My Copy] Biochemistry, Vol. 43, No. 16. (27 April 2004), pp. 4662-4669. by S. Yu, J. C. Lee posted to allostery cap dynamics mutations by ruvido on 2008-02-22 10:03:43 as
	Energetics of intersubunit and intrasubunit interactions of Escherichia coli adenosine cyclic 3',5'-phosphate receptor protein. [My Copy] Biochemistry, Vol. 32, No. 32. (17 August 1993), pp. 8130-8139. by X. Cheng, M. L. Gonzalez, J. C. Lee posted to cap folding by ruvido on 2008-02-22 10:00:24 as
	A linear correlation between the energetics of allosteric communication and protein flexibility in the Escherichia coli cyclic AMP receptor protein revealed by mutation-induced changes in compressibility and amide hydrogen-deuterium exchange. [My Copy] Biochemistry, Vol. 43, No. 13. (6 April 2004), pp. 3844-3852. by K. Gekko, N. Obu, J. Li, J. C. Lee posted to allostery cap dynamics mutations by ruvido on 2008-02-22 09:56:17 as
	Structure and dynamics of the modular halves of Escherichia coli cyclic AMP receptor protein. [My Copy] Biochemistry, Vol. 41, No. 50. (17 December 2002), pp. 14771-14778. by J. Li, X. Cheng, J. C. Lee posted to allostery cap dynamics by ruvido on 2008-02-22 09:44:24 as
	Communications between the high-affinity cyclic nucleotide binding sites in E. coli cyclic AMP receptor protein: effect of single site mutations. [My Copy] Biochemistry, Vol. 41, No. 39. (1 October 2002), pp. 11857-11867. by S. H. Lin, J. C. Lee posted to allostery cap kinetics by ruvido on 2008-02-22 09:33:56 as
	Ligand-induced conformational and structural dynamics changes in Escherichia coli cyclic AMP receptor protein. [My Copy] Biochemistry, Vol. 41, No. 21. (28 May 2002), pp. 6660-6667. by A. Dong, J. M. Malecki, L. Lee, J. F. Carpenter, J. C. Lee posted to allostery cap dynamics by ruvido on 2008-02-22 08:26:36 as
	Structural Understanding of the Allosteric Conformational Change of Cyclic AMP Receptor Protein by Cyclic AMP Binding [My Copy] Biochemistry, Vol. 39, No. 45. (14 November 2000), pp. 13953-13962. by H. S. Won, T. Yamazaki, T. W. Lee, et al.M. K. Yoon, S. H. Park, Y. Kyogoku, B. J. Lee posted to allostery cap by ruvido on 2008-02-22 08:23:38 as
	Modeling the cAMP-induced allosteric transition using the crystal structure of CAP-cAMP at 2.1 A resolution. [My Copy] J Mol Biol, Vol. 304, No. 5. (15 December 2000), pp. 847-859. by J. M. Passner, S. C. Schultz, T. A. Steitz posted to allostery cap xray by ruvido on 2008-02-18 10:21:49 as along with 1 person kgutwin
	A Computational Investigation of Allostery in the Catabolite Activator Protein [My Copy] J. Am. Chem. Soc., Vol. 129, No. 50. (19 December 2007), pp. 15668-15676. by L. Li, V. N. Uversky, A. K. Dunker, S. O. Meroueh posted to allostery cap by ruvido on 2007-12-29 14:30:54 as along with 1 person and 1 group sobolevnrm baker-group

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chapter	60
ppi	44
dynamics	34
protein	32
allostery	30
dhfr	25
subdiffusion	24
water	22
energy_landscape	19
enzyme	18
folding	18
kinetics	17
review	17
free-energy	16
cap	15
simulation	15
binding	14
catalysis	13
protein-interactions	12
nmr	11
fractals	10
hierarchy	10
population_shifts	10
genome	9
hemoglobin	8
md	8
network	8
cap_dna	7
conformation	7
experimental	7
gpu	7
random_walk	7
dna	6
ligands	6
models	6
motion	5
mutations	5
transition	5
xray	5
algorithm	4
chemistry	4
clusterization	4
d4	4
docking	4
entropy	4
molecular_dynamics	4
myoglobin	4
shaw	4
tmd	4
acetyl	3
channel	3
dihedrals	3
networks	3
nma	3
normal_modes	3
relaxation_dispersion	3
structure	3
thermodynamics	3
vibrational_modes	3
alaninedipeptide	2
barrier	2
capri	2
complex	2
database	2
denatured	2
flory	2
kinases	2
landscape	2
mwc	2
side-chains	2
spectroscopy	2
state	2
temperature	2
tse	2
x-ray	2
alanine__scanning	1
analysis	1
asimmetry	1
b-factors	1
biology	1
book	1
charmm	1
clustering	1
community	1
comparison	1
computation	1
computational	1
cups	1
cyclophilin	1
ferrys_law	1
flexibility	1
gene_fusion	1
history	1
homology	1
homology_modelling	1
markov	1
master_equation	1
modularity	1
molecular	1
moore	1
other	1
pathways	1
pca	1
physical_chemistry	1
physics	1
pmf	1
prediction	1
profile	1
proteins	1
psichology	1
qmm	1
religion	1
remd	1
rmsd_restraints	1
rna	1
rubik	1
sampling	1
solvation	1
system-biology	1
target	1
wall	1

ruvido's cap [15 articles] Export

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