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rvosa's genetics [110 articles]

Recent papers added to rvosa's library classified by the tag genetics. You can also see everyone's genetics.
  • Detecting lineage-specific adaptive evolution of brain-expressed genes in human using rhesus macaque as outgroup
    Genomics, Vol. 88, No. 6. (December 2006), pp. 745-751.
    by Xiao-Jing Yu, Hong-Kun Zheng, Jun Wang, Wen Wang, Bing Su
    posted to sequence-evolution selection ratio-test rates proteomics proteins protein primates phylogenomics models mammals humans hominidae genome genetics evolution encephalization dna divergence data-mining comparative clock-like anthropology animals amino-acid alignment adaptation by rvosa on 2008-08-12 08:00:47 as ** along with 1 group FAB-lab
  • Use and misuse of the gene ontology annotations.
    Nature reviews. Genetics (13 May 2008)
    by Seung Yon Rhee, Valerie Wood, Kara Dolinski, Sorin Draghici
    posted to programming ontology methods genome genetics by rvosa on 2008-08-12 07:52:51 as ** along with 20 people and 2 groups bpcusack marck capitall realzhang gjuggler A_Olympia fpattyn cmzmasek djkt renatomilani giovenko tmmurali cabbagesofdoom ptrobajo RamuAnandakrishnan roys carlk mariakmejia aheilbut jyuh FAB-lab logics of knowledge
  • Frequent False Detection of Positive Selection by the Likelihood Method with Branch-Site Models
    Mol Biol Evol, Vol. 21, No. 7. (1 July 2004), pp. 1332-1339.
    by Jianzhi Zhang
    posted to substitution-models sequence-evolution selection methods likelihood genetics by rvosa on 2008-08-12 04:02:24 as ** along with 1 person and 1 group Garamonfok FAB-lab
  • Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.
    Nat Genet, Vol. 25, No. 1. (May 2000), pp. 25-29.
    by M Ashburner, CA Ball, JA Blake, D Botstein, H Butler, JM Cherry, AP Davis, K Dolinski, SS Dwight, JT Eppig, MA Harris, DP Hill, L Issel-Tarver, A Kasarskis, S Lewis, JC Matese, JE Richardson, M Ringwald, GM Rubin, G Sherlock
    posted to proteomics proteins protein ontology genome genetics data-mining databases by rvosa on 2008-08-11 08:24:25 as ** along with 33 people and 6 groups roys dgront marck carlk pablomendes CitoJam aalibes miguel dragonrez lfriedl chad_davis yas balajis indigoviolet benny dullhunk nirfriedman fisherp caporaso helliontroy zlu gurkanbebek djkt massivemayhem incovoma leechuck aconesa sgoetz javamint bootsy PunkRock natstreet naegele FAB-lab kdl Bioinformatics EisenLab T_lab biomedical-nlp
  • Genetic variation in mRNA coding sequences of highly conserved genes
    Physiol. Genomics, Vol. 5, No. 3. (2 April 2001), pp. 113-118.
    by Ten, Jeffrey Olsen, David Housman, Frank Baas, Vince Stanton
    posted to variability sequence-evolution proteins protein primates nuclear humans hominidae genetics dna data-mining by rvosa on 2008-08-11 03:27:36 as ** along with 1 group FAB-lab
  • notes Positive selection, relaxation, and acceleration in the evolution of the human and chimp genome.
    PLoS Comput Biol, Vol. 2, No. 4. (April 2006)
    by L Arbiza, J Dopazo, H Dopazo
    posted to sequence-evolution selection ratio-test rates proteins protein primates phylogenomics ontology nuclear mammals humans hominidae genome genetics dna divergence data-mining comparative clock-like animals adaptation by rvosa on 2008-08-11 03:11:42 as read along with 5 people and 3 groups operon marcius jordibc hdopazo Garamonfok FAB-lab BioinfoCIPF SGU-CIPF
  • Molecular evolution of FOXP2, a gene involved in speech and language
    Nature, Vol. 418, No. 6900. (2002), pp. 869-872.
    by Wolfgang Enard, Molly Przeworski, Simon E Fisher, Cecilia S Lai, Victor Wiebe, Takashi Kitano, Anthony P Monaco, Svante Paabo
    posted to sequence-evolution sequence selection rodents rates primates mammals humans hominidae genetics animals by rvosa on 2008-08-10 09:57:48 as ** along with 1 person and 1 group djkt FAB-lab
  • A Phylogenetic Mixture Model for Detecting Pattern-Heterogeneity in Gene Sequence or Character-State Data
    Systematic Biology, Vol. 53, No. 4. (2004), 571.
    by Mark Pagel, Andrew Meade
    posted to substitution-models sequence phylogeny models methods genetics characters by rvosa on 2008-08-09 10:21:04 as ** along with 1 person and 1 group taka FAB-lab
  • Constrained models of evolution lead to improved prediction of functional linkage from correlated gain and loss of genes
    Bioinformatics, Vol. 23, No. 1. (1 January 2007), pp. 14-20.
    by Daniel Barker, Andrew Meade, Mark Pagel
    posted to phylogenomics networks models genetics comparative by rvosa on 2008-08-09 09:49:47 as ** along with 1 group FAB-lab
  • An evaluation of the molecular clock hypothesis using mammalian DNA sequences
    Journal of Molecular Evolution, Vol. 25, No. 4. (1987), pp. 330-342.
    by Wen-Hsiung Li, Masako Tanimura, Paul Sharp
    posted to substitution-models sequence-evolution rodents primates genetics evolution dna animals alignment by rvosa on 2008-08-09 05:56:40 as ** along with 1 group FAB-lab
  • notes Phylogenetic Relationships of Macaques as Inferred from Restriction Endonuclease Analysis of Mitochondrial DNA
    Folia Primatologia, Vol. 60 (1993), pp. 7-17.
    by Ya P Zhang, Shi L Ming
    posted to animals genetics mammals mitochondrial phylogeny polymorphism primates restriction vertebrates by rvosa on 2008-02-07 00:05:53 as **
  • Life history variation between species of the relictual genus Borderea (Dioscoreaceae): phylogeography, genetic diversity, and population genetic structure assessed by RAPD markers
    Biological Journal of the Linnean Society, Vol. 80, No. 3. (2003), pp. 483-498.
    by Segarra JG Moragues, P Catalan
    posted to biodiversity biogeography classification genetics life-history morphology polymerase-chain-reaction population-genetics taxonomy by rvosa on 2008-02-07 00:05:47 as **
  • notes Molecular Phylogeny of the New World Monkeys (Platyrrhini, Primates) Based on Two Unlinked Nuclear Genes: IRBP Intron 1 and e-Globin Sequences
    American Journal of Physical Anthropology, Vol. 100 (1996), pp. 153-179.
    by Horacio Schneider, Iracilda Sampaio, ML Harada, CML Barroso, Maria, John Czelusniak, M Goodman
    posted to animals cebidae evolution genetics mammals parsimony primates sequence-evolution source-trees substitution-models vertebrates by rvosa on 2008-02-07 00:05:46 as **
  • Comparative mapping of YRRM- and TSPY-related cosmids in man and hominoid apes
    Chrom. Res., Vol. 3 (1995), pp. 227-234.
    by W Schempp, A Binkele, J Arnemann, B Glser, K Ma, K Taylor, R Toder, J Wolfe, S Zeitler, AC Chandley
    posted to animals comparative genetics hominidae mammals primates vertebrates by rvosa on 2008-02-07 00:05:46 as **
  • Phylogenetics of Flowering Plants Based on Combined Analysis of Plastid atpB and rbcL Gene Sequences
    Systematic Biology, Vol. 49, No. 2. (2000), pp. 306-362.
    by Vincent Savolainen, Mark W Chase, Sara B Hoot, Cynthia M Morton, Douglas E Soltis, Clemens Bayer
    posted to data-mining genetics phylogeny phyloinformatics plants by rvosa on 2008-02-07 00:05:46 as **
  • notes Taxonomy of the Allouatta seniculus Group: Biochemical and Chromosome Data
    Primates, Vol. 37, No. 1. (1996), pp. 65-73.
    by Iracilda Sampaio, Maria, Horacio Schneider
    posted to animals classification genetics karyotyping mammals platyrrhines primates source-trees taxonomy vertebrates by rvosa on 2008-02-07 00:05:45 as **
  • notes Phylogenetic relationships among Indriidae (Primates, Strepsirhini) inferred from highly repeated DNA band patterns
    C. R. Acad. Sci. Paris, Sciences de la vie, Vol. 320 (1997), pp. 469-475.
    by Hanta Razafindraibe, Daniel Montagnon, Yves Rumpler
    posted to animals dna genetics mammals phylogeny primates source-trees strepsirrhines vertebrates by rvosa on 2008-02-07 00:05:43 as **
  • The Shape of Life : Genes, Development, and the Evolution of Animal Form
    (1996)
    by Rudolph A Raff
    posted to animals evolution genetics by rvosa on 2008-02-07 00:05:42 as **
  • The genetic architecture of divergence between threespine stickleback species
    Nature, Vol. 414 (2001), pp. 901-905.
    by CL Peichel, KS Nereng, KA Ohgi, BLE Cole, PF Colosimo, CA Buerkle, Dolph Schluter, DM Kingsley
    posted to animals divergence fishes genetics genome vertebrates by rvosa on 2008-02-07 00:05:41 as **
  • From Gene to Organismal Phylogeny: Reconciled Trees and the Gene Tree/Species Tree Problem
    Molecular Phylogenetics and Evolution, Vol. 7, No. 2. (1997), pp. 231-240.
    by Page, MA Charleston
    posted to classification genetics methods phylogeny by rvosa on 2008-02-07 00:05:41 as **
  • notes Microsatellite polymorphisms reveal phylogenetic relationships in primates
    Journal of Molecular Evolution, Vol. 41, No. 1. (1995), pp. 10-14.
    by E Meyer, P Wiegand, SP Rand, D Kuhlmann, M Brack, B Brinkmann
    posted to animals genetics mammals phylogeny polymorphism primates vertebrates by rvosa on 2008-02-07 00:05:37 as **
  • The Tarsius g-globin gene; pseudogene or active gene?
    Molecular Phylogenetics and Evolution, Vol. 13 (1999), pp. 434-439.
    by CM Meireles, J Czelusniak, M Goodman
    posted to animals genetics mammals primates vertebrates by rvosa on 2008-02-07 00:05:37 as **
  • notes Phylogenetic relationships among Brazilian howler monkeys, genus Alouatta (Platyrrhini, Atelidae), based on gamma(1)-globin pseudogene sequences
    Genetics and Molecular Biology, Vol. 22, No. 3. (1999), pp. 337-344.
    by CM Meireles, J Czelusniak, SF Ferrari, MPC Schneider, M Goodman
    posted to animals genetics mammals phylogeny primates vertebrates by rvosa on 2008-02-07 00:05:37 as **
  • Evolucao Molecular dos Genes Globinas Gama 1 e Gama 2 em Atelineos (Primates, Platyrrhini)
    (1997)
    by CM Meireles
    posted to animals evolution genetics platyrrhines primates sequence-evolution vertebrates by rvosa on 2008-02-07 00:05:37 as **
  • notes Radiation and Speciation of Spider Monkeys, Genus Ateles, From the Cytogenetic Viewpoint
    American Journal of Primatology, Vol. 42 (1997), pp. 167-178.
    by MA Medeiros, RMS Barros, JC Pieczarka, CY Nagamachi, M Ponsa, M Garcia, J Egozcue
    posted to animals cebidae genetics mammals primates radiation source-trees speciation vertebrates by rvosa on 2008-02-07 00:05:37 as **
  • Molecular support for Afrotheria and the polyphyly of Lipotyphla based on analyses of the growth hormone receptor gene
    Molecular Phylogenetics and Evolution, Vol. 24 (2002), pp. 91-101.
    by MJ Malia, RM Adkins, MW Allard
    posted to animals classification genetics mammals vertebrates by rvosa on 2008-02-07 00:05:36 as **
  • Relationships between morphology, genetics and geography in the cave fruit bat Eonycteris spelaea (Dobson, 1871) from Indonesia
    Biological Journal of the Linnean Society, Vol. 79, No. 4. (2003), pp. 511-522.
    by Maharadatunkamsi, S Hisheh, DJ Kitchener, LH Schmitt
    posted to adaptation biogeography genetics morphology morphometrics population by rvosa on 2008-02-07 00:05:36 as **
  • Phylogeography and conservation genetics of endangered European Margaritiferidae (Bivalvia: Unionoidea)
    Biological Journal of the Linnean Society, Vol. 78, No. 2. (2003), pp. 235-252.
    by A Machordom, R Araujo, D Erpenbeck, MA Ramos
    posted to animals biogeography conservation genetics invertebrates by rvosa on 2008-02-07 00:05:35 as **
  • notes Genetic patterns suggest exponential population growth in a declining species
    Molecular Biology and Evolution, Vol. 13, No. 8. (1996), pp. 1106-1113.
    by S Lavery, C Moritz, DR Fielder
    posted to diversification genetics methods population population-genetics topology by rvosa on 2008-02-07 00:05:34 as **
  • notes Evolution of Mhc-DRB Introns: Implications for the Origin of Primates
    Journal of Molecular Evolution, Vol. 48 (1999), pp. 663-674.
    by H Kupfermann, Y Satta, N Takahata, H Tichy, J Klein
    posted to animals chiroptera dna evolution genetics mammals primates sequence-evolution vertebrates by rvosa on 2008-02-07 00:05:34 as **
  • Type ISTS markers are more informative than cytochrome b in phylogenetic reconstruction of the Mustelidae (Mammalia : Carnivora)
    Systematic Biology, Vol. 52, No. 5. (2003), pp. 571-593.
    by KP Koepfli, RK Wayne
    posted to animals bayesian carnivora data-mining genetics likelihood mitochondrial nuclear parsimony phylogeny phyloinformatics vertebrates by rvosa on 2008-02-07 00:05:34 as **
  • Molecular evolution of the maize sex-determining gene TASSELSEED2 in Bouteloua (Poaceae)
    Molecular Phylogenetics and Evolution, Vol. 29, No. 3. (2003), pp. 519-528.
    by MS Kinney, JT Columbus, EA Friar
    posted to divergence genetics plants selection sexual by rvosa on 2008-02-07 00:05:34 as **
  • Phylogenetic analysis of HERV-K LTR-like elements in primates: presence in some New World monkeys and evidence of recent parallel evolution in these species and in Homo sapiens
    Arch. Virol., Vol. 144 (1999), pp. 2035-2040.
    by HS Kim, RV Wadekar, O Takenaka, BH Hyun, TJ Crow
    posted to animals evolution genetics hominidae mammals platyrrhines primates sequence-evolution vertebrates by rvosa on 2008-02-07 00:05:33 as **
  • Morphological and genetic analysis of fish of a Carassius complex (Cyprinidae) in Lake Kasumigaura with reference to the taxonomic status of two all-female triploid morphs
    Biological Journal of the Linnean Society, Vol. 79, No. 2. (2003), pp. 351-357.
    by K Iguchi, G Yamamoto, N Matsubara, M Nishida
    posted to animals classification fishes genetics morphology morphometrics taxonomy vertebrates by rvosa on 2008-02-07 00:05:32 as **
  • An eXceptional chromosome
    Trends in Genetics, Vol. 15, No. 10. (1999), pp. 383-385.
    by LD Hurst, JP Randerson
    posted to genetics by rvosa on 2008-02-07 00:05:32 as **
  • Major Transitions in Animal Evolution: A Developmental Genetic Perspective
    American Zool., Vol. 38 (1998), pp. 829-842.
    by Peter W Holland
    posted to animals evolution genetics by rvosa on 2008-02-07 00:05:31 as **
  • The g-globin genes and their flanking sequences in primates: Findings with nucleotide sequences of capuchin monkey and tarsier
    Genomics, Vol. 18 (1993), pp. 20-28.
    by K Hayasaka, CG Skinner, M Goodman, JL Slightom
    posted to animals genetics mammals primates sequence-evolution vertebrates by rvosa on 2008-02-07 00:05:30 as **
  • Genetic Linkage of Ecological Specialization and Reproductive Isolation in Pea Aphids
    Nature, Vol. 412 (2001), pp. 904-907.
    by DJ Hawthorne, Sara Via
    posted to animals ecology genetics insects invertebrates specialization speciation by rvosa on 2008-02-07 00:05:30 as **
  • True and false gharials: A nuclear gene phylogeny of Crocodylia
    Systematic Biology, Vol. 52, No. 3. (2003), pp. 386-402.
    by J Harshman, CJ Huddleston, JP Bollback, TJ Parsons, MJ Braun
    posted to bayesian genetics likelihood morphology nuclear phylogeny polymerase-chain-reaction ratio-test by rvosa on 2008-02-07 00:05:30 as **
  • notes Nuclear gene trees and the phylogenetic relationships of mangabeys (Primates: Papionini)
    Molecular Biology and Evolution, Vol. 15 (1998), pp. 892-900.
    by EE Harris, TR Disotell
    posted to animals genetics mammals nuclear phylogeny primates vertebrates by rvosa on 2008-02-07 00:05:30 as **
  • notes Molecular systematics of Old World monkey tribe Papionini: analysis of the total available genetic sequences
    Journal of Human Evolution, Vol. 38 (2000), pp. 235-256.
    by EE Harris
    posted to animals data-mining genetics mammals phylogeny primates source-trees vertebrates by rvosa on 2008-02-07 00:05:30 as **
  • notes DNA evidence on the phylogenetic systematics of New World monkeys: Support for the sister-grouping of Cebus and Saimiri from two unlinked nuclear genes
    Molecular Phylogenetics and Evolution, Vol. 4 (1995), pp. 331-349.
    by ML Harada, Horacio Schneider, Maria, Iracilda Sampaio, John Czelusniak, M Goodman
    posted to animals classification genetics mammals nuclear phylogeny primates source-trees vertebrates by rvosa on 2008-02-07 00:05:30 as **
  • notes Origin and phylogenetic distribution of Alu DNA repeats: Irreversible events in the evolution of primates
    Journal of Molecular Biology, Vol. 289, No. 4. (1999), pp. 861-871.
    by H Hamdi, H Nishio, R Zielinski, A Dugaiczyk
    posted to animals evolution genetics mammals phylogeny primates sequence-evolution source-trees vertebrates by rvosa on 2008-02-07 00:05:30 as **
  • Quantitative trait loci and gene interaction: the quantitative genetics of metapopulations
    Heredity, Vol. 84 (2000), pp. 587-598.
    by CJ Goodnight
    posted to genetics population-genetics by rvosa on 2008-02-07 00:05:19 as **
  • notes Inferring Pattern and Process: Maximum-Likelihood Implementation of a Nonhomogeneous Model of DNA Sequence Evolution for Phylogenetic Analysis
    Molecular Biology and Evolution, Vol. 15, No. 7. (1998), pp. 871-879.
    by Nicolas Galtier, Manolo Gouy
    posted to genetics likelihood phylogeny sequence-evolution substitution-models by rvosa on 2008-02-07 00:05:17 as **
  • notes Inferring phylogenies from DNA sequences of unequal base compositions
    Proceedings of the National Academy of Sciences USA, Vol. 92 (1995), pp. 11317-11321.
    by Nicolas Galtier, Manolo Gouy
    posted to algorithms genetics markov-chains methods monte-carlo phylogeny by rvosa on 2008-02-07 00:05:17 as **
  • Cautionary remarks on using gene expression events in parsimony procedures
    Systematic Zoology, Vol. 28 (1979), pp. 375-379.
    by WM Fitch
    posted to genetics methods parsimony phylogeny by rvosa on 2008-02-07 00:05:17 as **
  • Insulin-like growth factor II intron sequences support the hominoid rate-slowdown hypothesis
    Molecular Phylogenetics and Evolution, Vol. 2, No. 315-321. (1993)
    by DL Ellsworth, Hewett D Emmett, WH Li
    posted to animals dna genetics hominidae humans mammals nuclear primates rates substitution-models vertebrates by rvosa on 2008-02-07 00:05:16 as **
  • Genes that determine flower color: the role of regulatory changes in the evolution of phenotypic adaptations
    Molecular Phylogenetics and Evolution, Vol. 29, No. 3. (2003), pp. 507-518.
    by ML Durbin, KE Lundy, PL Morrell, Torres CL Martinez, MT Clegg
    posted to adaptation evolution genetics plants by rvosa on 2008-02-07 00:05:16 as **
  • Genetic variation in chrysanthemum for resistance to Frankliniella occidentalis (Thysanoptera: Thripidae)
    Entomologia Experimentalis et Applicata, Vol. 77 (1995), pp. 277-287.
    by CM De Jager, RPT Butot, PGL Klinkhamer, TJ de Jong, K Wolff, E van der Meijden
    posted to animals genetics insects invertebrates parasitism plants by rvosa on 2008-02-07 00:05:14 as **
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