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rvosa's nuclear [48 articles]

Recent papers added to rvosa's library classified by the tag nuclear. You can also see everyone's nuclear.
  • Genetic variation in mRNA coding sequences of highly conserved genes
    Physiol. Genomics, Vol. 5, No. 3. (2 April 2001), pp. 113-118.
    by Ten, Jeffrey Olsen, David Housman, Frank Baas, Vince Stanton
    posted to data-mining dna genetics hominidae humans nuclear primates protein proteins sequence-evolution variability by rvosa on 2008-08-11 03:27:36 as ** along with 1 group FAB-lab
  • notes Positive selection, relaxation, and acceleration in the evolution of the human and chimp genome.
    PLoS Comput Biol, Vol. 2, No. 4. (April 2006)
    by L Arbiza, J Dopazo, H Dopazo
    posted to adaptation animals clock-like comparative data-mining divergence dna genetics genome hominidae humans mammals nuclear ontology phylogenomics primates protein proteins rates ratio-test selection sequence-evolution by rvosa on 2008-08-11 03:11:42 as read along with 5 people and 3 groups operon marcius jordibc hdopazo Garamonfok BioinfoCIPF SGU-CIPF FAB-lab
  • Strong Variations of Mitochondrial Mutation Rate across Mammals--the Longevity Hypothesis
    Mol Biol Evol, Vol. 25, No. 1. (1 January 2008), pp. 120-130.
    by Benoit Nabholz, Sylvain Glemin, Nicolas Galtier
    posted to animals clock-like comparative life-history mammals mitochondrial nuclear population-genetics rates substitution-models by rvosa on 2008-08-09 21:35:08 as ** along with 4 people and 1 group aprasad renatomilani smbe2008 stevanspringer FAB-lab
  • The rate of DNA evolution: effects of body size and temperature on the molecular clock.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 1. (4 January 2005), pp. 140-145.
    by JF Gillooly, AP Allen, GB West, JH Brown
    posted to clock-like comparative genome mitochondrial morphometrics nuclear rates substitution-models by rvosa on 2008-08-09 21:12:36 as ** along with 1 group FAB-lab
  • Partitioning the variation in mammalian substitution rates.
    Mol Biol Evol, Vol. 20, No. 1. (January 2003), pp. 10-17.
    by NG Smith, A Eyre-Walker
    posted to animals mammals mitochondrial nuclear rates sequence-evolution substitution-models by rvosa on 2008-08-09 21:07:32 as ** along with 1 person and 1 group mdimmic FAB-lab
  • notes Strepsirrhine phylogeny: Congruence of results from a mitochondrial and a nuclear gene
    American Journal of Physical Anthropology, Vol. 22 (1996)
    by AD Yoder
    posted to animals mammals mitochondrial nuclear phylogeny primates source-trees strepsirrhines vertebrates by rvosa on 2008-02-07 00:05:52 as **
  • notes Molecular Evolution of Cytochrome c Oxidase Subunit I in Primates: Is There Coevolution between Mitochondrial and Nuclear Genomes?
    Molecular Phylogenetics and Evolution, Vol. 17, No. 2. (January 2000), pp. 294-304.
    by Wei Wu, TR Schmidt, M Goodman, Lawrence I Grossman
    posted to animals dna genome mammals mitochondrial nuclear phylogenomics primates source-trees substitution-models vertebrates by rvosa on 2008-02-07 00:05:52 as **
  • The phylogenetic relationships of the cyanobacterial lichens in the Lecanorales suborder Peltigerineae
    Cladistics-the International Journal of the Willi Hennig Society, Vol. 19, No. 5. (2003), pp. 419-431.
    by E Wiklund, M Wedin
    posted to bacteria classification fungi mitochondrial nuclear parsimony phylogeny weighting by rvosa on 2008-02-07 00:05:51 as **
  • notes Phylogenetic relationships of the New World monkeys (Primates, Platyrrhini) based on nuclear G6PD sequences
    Molecular Phylogenetics and Evolution, Vol. 11, No. 3. (April 1999), pp. 459-476.
    by M Von Dornum, Maryellen Ruvolo
    posted to animals mammals nuclear primates sequence-evolution source-trees vertebrates by rvosa on 2008-02-07 00:05:51 as **
  • notes DNA Sequence Data from Mitochondrial COII and Nuclear G6PD Loci and a Molecular Phylogeny of the New World Monkeys (Primates, Platyrrhini)
    (1997)
    by M Von Dornum
    posted to animals mammals mitochondrial nuclear primates sequence-evolution vertebrates by rvosa on 2008-02-07 00:05:51 as **
  • Molecular phylogeny of wood mice (Apodemus, Muridae) in East Asia
    Biological Journal of the Linnean Society, Vol. 80, No. 3. (2003), pp. 469-481.
    by H Suzuki, JJ Sato, K Tsuchiya, J Luo, YP Zhang, YX Wang, XL Jiang
    posted to animals clock-like ecology evolution mammals mice mitochondrial nuclear phylogeny radiation rodents speciation vertebrates by rvosa on 2008-02-07 00:05:48 as **
  • Ancient allopolyploid speciation in geinae (Rosaceae): Evidence from nuclear granule-bound starch synthase (GBSSI) gene sequences
    Systematic Biology, Vol. 52, No. 3. (2003), pp. 374-385.
    by JEE Smedmark, T Eriksson, RC Evans, CS Campbell
    posted to characters evolution hybridization likelihood morphology nuclear phylogenomics phylogeny plants reconstruction sequence-evolution by rvosa on 2008-02-07 00:05:47 as **
  • Molecular phylogenetics of allodapine bees, with implications for the evolution of sociality and progressive rearing
    Systematic Biology, Vol. 52, No. 1. (2003), pp. 1-14.
    by MP Schwarz, NJ Bull, SJB Cooper
    posted to behaviour evolution life-history likelihood mitochondrial morphology nuclear parsimony sociality by rvosa on 2008-02-07 00:05:47 as **
  • Evolution in the slow lane: molecular rates of evolution in sexual and asexual ostracods (Crustacea : Ostracoda)
    Biological Journal of the Linnean Society, Vol. 79, No. 1. (2003), pp. 93-100.
    by I Schon, K Martens, K Van Doninck, RK Butlin
    posted to animals evolution extinction mitochondrial nuclear rates by rvosa on 2008-02-07 00:05:47 as **
  • The evolutionary history of the Chydoridae (Crustacea : Cladocera)
    Biological Journal of the Linnean Society, Vol. 79, No. 4. (2003), pp. 629-643.
    by V Sacherova, PDN Hebert
    posted to animals classification divergence diversification evolution invertebrates mitochondrial nuclear phylogeny by rvosa on 2008-02-07 00:05:45 as **
  • notes Sequences From the 5' Flanking Region of the e-Globin Gene Support the Relationship of Callicebus With the Pitheciins
    American Journal of Primatology, Vol. 48 (1999), pp. 69-75.
    by Calvin A Porter, John Czelusniak, Horacio Schneider, Maria, Iracilda Sampaio, Morris Goodman
    posted to animals clock-like divergence dna mammals nuclear primates sequence-evolution source-trees vertebrates by rvosa on 2008-02-07 00:05:42 as **
  • Evidence for ecological speciation in the sister species Candidula unifasciata (Poiret, 1801) and C-rugosiuscula (Michaud, 1831) (Helicellinae, Gastropoda)
    Biological Journal of the Linnean Society, Vol. 79, No. 4. (2003), pp. 611-628.
    by M Pfenninger, A Eppenstein, F Magnin
    posted to animals biogeography ecology invertebrates mitochondrial morphometrics nuclear speciation by rvosa on 2008-02-07 00:05:42 as **
  • notes Molecular phylogeny of Old World monkeys (Cercopithecidae) as inferred from g-globin DNA sequences
    Molecular Phylogenetics and Evolution, Vol. 13 (1999), pp. 348-359.
    by SL Page, CH Chiu, M Goodman
    posted to animals dna mammals nuclear primates source-trees vertebrates by rvosa on 2008-02-07 00:05:41 as **
  • notes Gorilla and Orangutan c-myc Nucleotide Sequences: Inference on Hominoid Phylogeny
    Journal of Molecular Evolution, Vol. 41 (1995), pp. 262-276.
    by Mohammad K Ali, ME Eladari, F Galibert
    posted to animals dna mammals nuclear phylogeny primates sequence source-trees vertebrates by rvosa on 2008-02-07 00:05:37 as **
  • notes Nuclear Counterparts of the Cytoplasmic Mitochondrial 12S rRNA Gene: A Problem of Ancient DNA and Molecular Phylogenies
    Journal of Molecular Evolution, Vol. 40 (1995), pp. 652-657.
    by AC van der Kuyl, CL Kuiken, JT Dekker, WRK Perizonius, J Goudsmit
    posted to animals dna mammals mitochondrial nuclear phylogenomics primates vertebrates by rvosa on 2008-02-07 00:05:34 as **
  • Type ISTS markers are more informative than cytochrome b in phylogenetic reconstruction of the Mustelidae (Mammalia : Carnivora)
    Systematic Biology, Vol. 52, No. 5. (2003), pp. 571-593.
    by KP Koepfli, RK Wayne
    posted to animals bayesian carnivora data-mining genetics likelihood mitochondrial nuclear parsimony phylogeny phyloinformatics vertebrates by rvosa on 2008-02-07 00:05:34 as **
  • Molecular systematics and adaptive radiation of Hawaii's endemic damselfly genus Megalagrion (Odonata : Coenagrionidae)
    Systematic Biology, Vol. 52, No. 1. (2003), pp. 89-109.
    by S Jordan, C Simon, D Polhemus
    posted to adaptation animals bayesian insects invertebrates likelihood mitochondrial nuclear phylogeny radiation ratio-test speciation substitution-models topology by rvosa on 2008-02-07 00:05:33 as **
  • When do parasites fail to speciate in response to host speciation?
    Systematic Biology, Vol. 52, No. 1. (2003), pp. 37-47.
    by KP Johnson, RJ Adams, RDM Page, DH Clayton
    posted to animals birds dna insects invertebrates mitochondrial nuclear parasitism phylogeny population-genetics rates speciation substitution-models topology vertebrates by rvosa on 2008-02-07 00:05:32 as **
  • notes A Reassessment of Mammalian aA-Crystallin Sequences Using DNA Sequencing: Implications for Anthropoid Affinities of Tarsier
    Journal of Molecular Evolution, Vol. 41 (1995), pp. 901-908.
    by CJ Jaworski
    posted to amino-acid animals dna mammals nuclear primates protein sequence source-trees vertebrates vision by rvosa on 2008-02-07 00:05:32 as **
  • Molecular and morphological phylogenies of Ruminantia and the alternative position of the Moschidae
    Systematic Biology, Vol. 52, No. 2. (2003), pp. 206-228.
    by A Hassanin, EJP Douzery
    posted to animals bayesian biogeography classification clock-like divergence diversification mammals mitochondrial nuclear radiation rates vertebrates by rvosa on 2008-02-07 00:05:30 as **
  • True and false gharials: A nuclear gene phylogeny of Crocodylia
    Systematic Biology, Vol. 52, No. 3. (2003), pp. 386-402.
    by J Harshman, CJ Huddleston, JP Bollback, TJ Parsons, MJ Braun
    posted to bayesian genetics likelihood morphology nuclear phylogeny polymerase-chain-reaction ratio-test by rvosa on 2008-02-07 00:05:30 as **
  • notes Nuclear gene trees and the phylogenetic relationships of mangabeys (Primates: Papionini)
    Molecular Biology and Evolution, Vol. 15 (1998), pp. 892-900.
    by EE Harris, TR Disotell
    posted to animals genetics mammals nuclear phylogeny primates vertebrates by rvosa on 2008-02-07 00:05:30 as **
  • notes DNA evidence on the phylogenetic systematics of New World monkeys: Support for the sister-grouping of Cebus and Saimiri from two unlinked nuclear genes
    Molecular Phylogenetics and Evolution, Vol. 4 (1995), pp. 331-349.
    by ML Harada, Horacio Schneider, Maria, Iracilda Sampaio, John Czelusniak, M Goodman
    posted to animals classification genetics mammals nuclear phylogeny primates source-trees vertebrates by rvosa on 2008-02-07 00:05:30 as **
  • A phylogeny of megachiropteran bats (Mammalia : Chiroptera : Pteropodidae) based on direct optimization analysis of one nuclear and four mitochondrial genes
    Cladistics-the International Journal of the Willi Hennig Society, Vol. 19, No. 6. (2003), pp. 496-511.
    by NP Giannini, NB Simmons
    posted to animals chiroptera dna mammals mitochondrial nuclear phylogeny vertebrates by rvosa on 2008-02-07 00:05:18 as **
  • Insulin-like growth factor II intron sequences support the hominoid rate-slowdown hypothesis
    Molecular Phylogenetics and Evolution, Vol. 2, No. 315-321. (1993)
    by DL Ellsworth, Hewett D Emmett, WH Li
    posted to animals dna genetics hominidae humans mammals nuclear primates rates substitution-models vertebrates by rvosa on 2008-02-07 00:05:16 as **
  • Identifying conflicting signal in a multigene analysis reveals a highly resolved tree: The phylogeny of Rodentia (Mammalia)
    Systematic Biology, Vol. 52, No. 5. (2003), pp. 604-617.
    by RW Debry
    posted to animals bayesian dna likelihood mammals markov-chains monte-carlo nuclear phylogeny phyloinformatics protein rodents vertebrates by rvosa on 2008-02-07 00:05:14 as **
  • Phylogenetics of sigmodontinae (Rodentia, Muroidea, Cricetidae), with special reference to the akodont group, and with additional comments on historical biogeography
    Cladistics-the International Journal of the Willi Hennig Society, Vol. 19, No. 4. (2003), pp. 307-323.
    by G D'Elia
    posted to animals biogeography dna mammals mitochondrial nuclear parsimony phylogeny rodents vertebrates by rvosa on 2008-02-07 00:05:14 as **
  • notes Insertions and duplications of mtDNA in the nuclear genomes of Old World monkeys and hominoids
    Nature, Vol. 378 (1995), pp. 485-489.
    by RV Collura, CB Stewart
    posted to animals dna genome mammals mitochondrial nuclear primates sequence-evolution source-trees vertebrates by rvosa on 2008-02-07 00:05:13 as **
  • notes Nuclear DNA Variation in Spider Monkeys (Ateles)
    Molecular Phylogenetics and Evolution, Vol. 19, No. 1. (2001), pp. 67-75.
    by AC Collins, JM Dubach
    posted to animals dna mammals nuclear primates source-trees vertebrates by rvosa on 2008-02-07 00:05:13 as **
  • notes The place of Callimico goeldii in the callitrichine phylogenetic tree: evidence from von Willebrand factor (vWF) intron II sequences
    Molecular Phylogenetics and Evolution, Vol. 13 (1999), pp. 392-404.
    by R Chaves, Iracilda Sampaio, Maria, Horacio Schneider, SL Page, M Goodman
    posted to animals dna mammals nuclear primates source-trees vertebrates by rvosa on 2008-02-07 00:05:12 as **
  • notes Phylogenetic Relationships of the Callitrichinae (Platyrrhini, Primates) Based on b2-Microglobulin DNA Sequences
    American Journal of Primatology, Vol. 48 (1999), pp. 225-236.
    by Flavio C Canavez, Miguel AM Moreira, Faical Simon, Peter Parham, Hector N Seuanez
    posted to amino-acid animals dna mammals nuclear phylogeny primates protein source-trees vertebrates by rvosa on 2008-02-07 00:05:12 as **
  • notes Molecular phylogeny of New World primates (Platyrrhini) based on b2-microglobulin DNA sequences
    Molecular Phylogenetics and Evolution, Vol. 12 (1999), pp. 74-82.
    by Flavio C Canavez, Miguel AM Moreira, JJ Ladasky, A Pissinatii, Peter Parham, Hector N Seuanez
    posted to animals dna mammals nuclear primates source-trees vertebrates by rvosa on 2008-02-07 00:05:12 as **
  • notes Pan paniscus and Hominoid Phylogeny: Morphological Data, Molecular Data and 'Total Evidence'
    Folia Primatologia, Vol. 68 (1997), pp. 50-56.
    by Veronique Barriel
    posted to animals data-mining dna hominidae mammals morphology nuclear parsimony phylogeny phyloinformatics primates source-trees vertebrates by rvosa on 2008-02-07 00:05:07 as **
  • Nuclear ribosomal DNA sequence polymorphism and hybridization in checker mallows (Sidalcea, Malvaceae)
    Molecular Phylogenetics and Evolution, Vol. 29, No. 3. (2003), pp. 563-581.
    by K Andreasen, BG Baldwin
    posted to dna hybridization nuclear plants polymorphism sequence by rvosa on 2008-02-07 00:05:06 as **
  • V(D)J recombination and the evolution of the adaptive immune system
    PLoS Biol, Vol. 1, No. 1. (Oct 2003)
    by Eleonora Market, Nina F Papavasiliou
    posted to animals dna evolution genetics humans mammals mice models nuclear primates proteins recombination rodents vertebrates by rvosa on 2008-01-30 08:07:15 as **
  • A comparison of nuclear and mitochondrial data sets for the recovery of the phylogeny of the Unionoidea
    Morphology, Zoogeography, and Taxonomy of Fusconia flava (Rafinesque) (Mollusca: Bivalvia: Unionidea) in the upper Mississippi, Great Lakes, and Nelson River Basins (May 1997)
    by Daniel L Graf
    posted to dna methods mitochondrial nuclear phylogeny by rvosa on 2008-01-30 08:07:12 as **
  • Phylogenetic relationships among the macaques: evidence from the nuclear locus NRAMP1
    J Hum Evol, Vol. 41 (2001), pp. 45-59.
    by A Deinard, DG Smith
    posted to animals cercopithecidae dna mammals nuclear phylogeny primates vertebrates by rvosa on 2008-01-30 08:07:10 as **
  • Evolution of exon 1 of the dopamine D 4 receptor(DRD 4) gene in primates
    Journal of Experimental Zoology (2000)
    by M Seaman, F Chang, A Deinard, A Quinones, KK Kidd
    posted to animals dna evolution genetics mammals nuclear primates vertebrates by rvosa on 2008-01-30 08:07:09 as **
  • Relative rates of nuclear DNA evolution in human and Old World monkey lineages
    Molecular Biology and Evolution, Vol. 13, No. 7. (1996), pp. 1054-1057.
    by G Herbert, S Easteal
    posted to animals cercopithecidae dna evolution genetics humans mammals nuclear primates rates sequence substitution-models vertebrates by rvosa on 2008-01-30 08:07:09 as **
  • Molecular evolution of n-formyl peptide and C5a receptors in non-human primates
    Immunology Letters, Vol. 44 (1996), pp. 446-452.
    by V Alvarez, E Coto, F Setien, S Gonzalez-Roces, C Lopez-Larrea
    posted to animals dna evolution genetics mammals nuclear primates vertebrates by rvosa on 2008-01-30 08:07:05 as **
  • Evidence on Mammalian Phylogeny from Sequences of Exon 28 of the von Willebrand Factor Gene
    Molecular Phylogenetics and Evolution, Vol. 5, No. 1. (1996), pp. 89-101.
    by C Porter, M Goodman, M Stanhope
    posted to animals dna genetics mammals nuclear phylogeny sequence vertebrates by rvosa on 2008-01-30 08:07:05 as **
  • Investigation of the RH Locus in Gorillas and Chimpanzees
    Journal of Molecular Evolution, Vol. 42 (1996), pp. 658-668.
    by CM Westhoff, DE Wylie
    posted to animals dna genetics hominidae mammals nuclear primates source-trees vertebrates by rvosa on 2008-01-30 08:07:05 as **
  • Primate phylogeny, evolutionary rate variations, and divergence times: A contribution from the nuclear gene IRBP
    American Journal of Physical Anthropology, Vol. 124 (2004), pp. 1-16.
    by C Poux, E Douzery
    posted to animals divergence dna evolution genetics mammals nuclear phylogeny primates rates vertebrates by rvosa on 2008-01-30 08:07:05 as **
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