ryang's library 207 articles Export

	Relative fitness can decrease in evolving asexual populations of S. cerevisiae [My Copy] Nature, Vol. 306 (1983), pp. 368-371. by Charlotte E. Paquin, Julian Adams posted to a_exam evolution experimental_evolution by ryang on 2006-01-25 03:06:18 as
	The Genetical Theory of Natural Selection [My Copy] (1930) by R. A. Fisher posted to a_exam evolution fisher by ryang on 2006-01-23 21:20:36 as
	Population Genetics: A Concise Guide [My Copy] (2004) by John H. Gillespie posted to a_exam evolution by ryang on 2006-01-23 21:17:50 as
	The Population Genetics of Adaptation: The Distribution of Factors Fixed during Adaptive Evolution [My Copy] Evolution, Vol. 52, No. 4. (1998), pp. 935-949. by Allen H. Orr posted to a_exam evolution fisher by ryang on 2006-01-23 21:09:29 as along with 5 people and 1 group diamantis stevanspringer balicea cmm shoshin FAB-lab
	Molecular Evolution over the Mutational Landscape [My Copy] Evolution, Vol. 38, No. 5. (1984), pp. 1116-1129. by John H. Gillespie posted to a_exam evolution gillespe by ryang on 2006-01-23 21:02:36 as
	The distribution of fitness effects among beneficial mutations in Fisher's geometric model of adaptation. [My Copy] J Theor Biol (27 June 2005) by Allen H. Orr posted to a_exam evolution fisher by ryang on 2006-01-23 21:02:28 as along with 3 people and 1 group diamantis stevanspringer darbuthnott FAB-lab
	What constitutes a 'large' mutational change in phenotype? [My Copy] Evol Dev, Vol. 2, No. 5. (t 2000), pp. 238-240. by B. Clarke, W. Arthur posted to a_exam evolution fisher by ryang on 2006-01-23 20:55:22 as
	Adaptation and the cost of complexity. [My Copy] Evolution Int J Org Evolution, Vol. 54, No. 1. (February 2000), pp. 13-20. by H. A. Orr posted to a_exam evolution fisher by ryang on 2006-01-23 20:54:41 as along with 2 people and 2 groups stevanspringer VRadenovic FAB-lab DSTO-CAS
	The population genetics of adaptation: the adaptation of DNA sequences. [My Copy] Evolution Int J Org Evolution, Vol. 56, No. 7. (July 2002), pp. 1317-1330. by H. A. Orr posted to a_exam evolution fisher by ryang on 2006-01-23 20:47:53 as along with 1 person and 1 group stevanspringer FAB-lab
	The evolutionary genetics of adaptation: a simulation study. [My Copy] Genet Res, Vol. 74, No. 3. (December 1999), pp. 207-214. by H. A. Orr posted to a_exam evolution fisher by ryang on 2006-01-23 20:47:03 as
	Evolution: towards a genetical theory of adaptation. [My Copy] Curr Biol, Vol. 11, No. 11. (5 June 2001) by M. Travisano posted to a_exam evolution experimental_evolution by ryang on 2006-01-23 20:40:54 as along with 1 person balicea
	Compensatory nearly neutral mutations: selection without adaptation. [My Copy] J Theor Biol, Vol. 182, No. 3. (7 October 1996), pp. 303-309. by D. L. Hartl, C. H. Taubes posted to a_exam evolution by ryang on 2006-01-23 20:38:53 as
	Towards a theory of evolutionary adaptation. [My Copy] Genetica, Vol. 102-103, No. 1-6. (1998), pp. 525-533. by D. L. Hartl, C. H. Taubes posted to a_exam evolution by ryang on 2006-01-23 20:30:36 as
	Parameter estimation for a mathematical model of the cell cycle in frog eggs. [My Copy] J Comput Biol, Vol. 12, No. 1. (2005), pp. 48-63. by Jason W. Zwolak, John J. Tyson, Layne T. Watson posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Molecular dynamics simulations of peptides and proteins with amplified collective motions. [My Copy] Biophys J, Vol. 84, No. 6. (Jun 2003), pp. 3583-3593. by Zhiyong Zhang, Yunyu Shi, Haiyan Liu posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Rap1 mediates sustained MAP kinase activation induced by nerve growth factor. [My Copy] Nature, Vol. 392, No. 6676. (Apr 1998), pp. 622-626. by R. D. York, H. Yao, T. Dillon, et al.C. L. Ellig, S. P. Eckert, E. W. Mccleskey, P. J. Stork posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Mathematical modeling of RGS and G-protein regulation in yeast. [My Copy] Methods Enzymol, Vol. 389 (2004), pp. 383-98. by Necmettin Yildirim, Nan Hao, Henrik G. Dohlman, Timothy C. Elston posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	A quantitative characterization of the yeast heterotrimeric G protein cycle. [My Copy] Proc Natl Acad Sci U S A, Vol. 100, No. 19. (Sep 2003), pp. 10764-9. by Tau M. Yi, Hiroaki Kitano, Melvin I. Simon posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Target validation of G-protein coupled receptors. [My Copy] Drug Discov Today, Vol. 7, No. 4. (Feb 2002), pp. 235-46. by Alan Wise, Katy Gearing, Stephen Rees posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Design principles for regulator gene expression in a repressible gene circuit. [My Copy] J Mol Biol, Vol. 332, No. 4. (Sep 2003), pp. 861-76. by Michael E. Wall, William S. Hlavacek, Michael A. Savageau posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Circuit topology and the evolution of robustness in two-gene circadian oscillators. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 33. (Aug 2005), pp. 11775-11780. by Andreas Wagner posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	The Bacillus subtilis sin operon: an evolvable network motif. [My Copy] Genetics, Vol. 169, No. 3. (Mar 2005), pp. 1187-202. by Christopher A. Voigt, Denise M. Wolf, Adam P. Arkin posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Mechanisms of noise-resistance in genetic oscillators. [My Copy] Proc Natl Acad Sci U S A, Vol. 99, No. 9. (Apr 2002), pp. 5988-5992. by José M. G. Vilar, Hao Y. Kueh, Naama Barkai, Stanislas Leibler posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Modeling network dynamics: the lac operon, a case study. [My Copy] J Cell Biol, Vol. 161, No. 3. (May 2003), pp. 471-476. by José M. G. Vilar, C?lin C. Guet, Stanislas Leibler posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Robust oscillations within the interlocked feedback model of Drosophila circadian rhythm. [My Copy] J Theor Biol, Vol. 210, No. 4. (Jun 2001), pp. 401-406. by H. R. Ueda, M. Hagiwara, H. Kitano posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Modeling the cell division cycle: cdc2 and cyclin interactions. [My Copy] Proc Natl Acad Sci U S A, Vol. 88, No. 16. (Aug 1991), pp. 7328-7332. by J. J. Tyson posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	On the design and analysis of protein folding potentials. [My Copy] Proteins, Vol. 40, No. 1. (Jul 2000), pp. 71-85. by D. Tobi, G. Shafran, N. Linial, R. Elber posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Large Amplitude Elastic Motions in Proteins from a Single-Parameter, Atomic Analysis. [My Copy] PHYSICAL REVIEW LETTERS, Vol. 77, No. 9. (Aug 1996), pp. 1905-1908. by N. M. Tirion posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Testing biochemistry. [My Copy] Eur J Biochem, Vol. 267, No. 17. (Sep 2000), pp. 5313-29. by B. Teusink, J. Passarge, C. A. Reijenga, et al.E. Esgalhado, C. C. van der Weijden, M. Schepper, M. C. Walsh, B. M. Bakker, K. van Dam, H. V. Westerhoff, J. L. Snoep posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Conformational change of proteins arising from normal mode calculations. [My Copy] Protein Eng, Vol. 14, No. 1. (Jan 2001), pp. 1-6. by F. Tama, Y. H. Sanejouand posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Building-block approach for determining low-frequency normal modes of macromolecules. [My Copy] Proteins, Vol. 41, No. 1. (Oct 2000), pp. 1-7. by F. Tama, F. X. Gadea, O. Marques, Y. H. Sanejouand posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Identification of G protein-coupled receptor genes from the human genome sequence. [My Copy] FEBS Lett, Vol. 520, No. 1-3. (Jun 2002), pp. 97-101. by Shigeki Takeda, Shiro Kadowaki, Tatsuya Haga, Hirotomo Takaesu, Shigeki Mitaku posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Conformational sampling for the impatient. [My Copy] Biophys Chem, Vol. 107, No. 3. (Feb 2004), pp. 213-220. by Kaihsu Tai posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Pretty good guessing: protein structure prediction at CASP5 [My Copy] J Bacteriol, Vol. 185, No. 14. (Jul 2003), pp. 3990-3993. by Rosemarie Swanson, Jerry Tsai posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	ElNémo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement [My Copy] (2004) by Karsten Suhre, Yves . Sanejouand posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	The molecules of visual excitation [My Copy] Sci Am, Vol. 257, No. 1. (Jul 1987), pp. 42-50. by L. Stryer posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Robustness of cellular functions. [My Copy] Cell, Vol. 118, No. 6. (Sep 2004), pp. 675-685. by Jörg Stelling, Uwe Sauer, Zoltan Szallasi, Francis J. Doyle, John Doyle posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Mapping of effector binding sites of transducin alpha-subunit using G alpha t/G alpha i1 chimeras. [My Copy] J Biol Chem, Vol. 271, No. 1. (Jan 1996), pp. 413-24. by N. P. Skiba, H. Bae, H. E. Hamm posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Mean-field approaches to the totally asymmetric exclusion process with quenched disorder and large particles. [My Copy] Phys Rev E Stat Nonlin Soft Matter Phys, Vol. 70, No. 2 Pt 1. (Aug 2004) by Leah B. Shaw, James P. Sethna, Kelvin H. Lee posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	MathSBML: a package for manipulating SBML-based biological models. [My Copy] Bioinformatics, Vol. 20, No. 16. (Nov 2004), pp. 2829-31. by Bruce E. Shapiro, Michael Hucka, Andrew Finney, John Doyle posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Detailed map of a cis-regulatory input function [My Copy] Proc Natl Acad Sci U S A, Vol. 100, No. 13. (June 2003), pp. 7702-7707. by Y. Setty, A. E. Mayo, M. G. Surette, U. Alon posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Stochastic amplification and signaling in enzymatic futile cycles through noise-induced bistability with oscillations. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 7. (Feb 2005), pp. 2310-5. by Michael Samoilov, Sergey Plyasunov, Adam P. Arkin posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	A hybrid approach for efficient and robust parameter estimation in biochemical pathways [My Copy] Biosystems, Vol. In Press, Corrected Proof by Maria R. Fernandez, Pedro Mendes, Julio R. Banga posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Protein Folding slides [My Copy] by Daniel Ripoll posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Transforming G proteins. [My Copy] Oncogene, Vol. 20, No. 13. (Mar 2001), pp. 1607-14. by V. Radhika, N. Dhanasekaran posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Uniform sampling of steady-state flux spaces: means to design experiments and to interpret enzymopathies. [My Copy] Biophys J, Vol. 87, No. 4. (Oct 2004), pp. 2172-86. by Nathan D. Price, Jan Schellenberger, Bernhard O. Palsson posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	The intrinsic fluorescence of the alpha subunit of transducin. Measurement of receptor-dependent guanine nucleotide exchange. [My Copy] J Biol Chem, Vol. 263, No. 30. (Oct 1988), pp. 15498-505. by W. J. Phillips, R. A. Cerione posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Untitled [My Copy] posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	Untitled [My Copy] by Andrea Pelissettoa, Ettore Vicari posted to jabref-import by ryang on 2006-01-22 16:33:04 as
	A comparison of techniques for the estimation of model prediction uncertainty [My Copy] Ecological Modelling, Vol. 115, No. 1. (February 1999), pp. 45-59. by Martin Omlin, Peter Reichert posted to jabref-import by ryang on 2006-01-22 16:33:04 as

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jabref-import	143
a_exam	47
evolution	38
inference	8
fisher	7
experimental_evolution	5
g-proteins	5
pc12	5
qtl	4
identifiability	2
statistics	2
adaptive_dynamics	1
cytometry	1
dynamic	1
fret	1
game_theory	1
gillespe	1
horizontal_transfer	1
in_vivo	1
modeling	1
molecular_clock	1
molecular_evolution	1
robustness	1
sex	1
structure	1
yeast	1

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