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Single-Molecule Imaging of a Fluorescent Unnatural Amino Acid Incorporated Into Nicotinic Receptors Export

Biophysical Journal, Vol. 96, No. 1. (07 January 2009), pp. 226-237.

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We report on the first, to our knowledge, successful detection of a fluorescent unnatural amino acid (fUAA), Lys(BODIPYFL), incorporated into a membrane protein (the muscle nicotinic acetylcholine receptor, nAChR) in a living cell. Xenopus oocytes were injected with a frameshift-suppressor tRNA, amino-acylated with Lys(BODIPYFL) and nAChR ( α / β 19′GGGU/ γ / δ ) mRNAs. We measured fluorescence from oocytes expressing nAChR β 19′Lys(BODIPYFL), using time-resolved total internal reflection fluorescence microscopy. Under conditions of relatively low receptor density (<0.1 receptors/ μ m 2 ), we observed puncta with diffraction-limited profiles that were consistent with the point-spread function of our microscope. Furthermore, diffraction-limited puncta displayed step decreases in fluorescence intensity, consistent with single-molecule photobleaching. The puncta densities agreed with macroscopic ACh-induced current densities, showing that the fUAA was incorporated, and that receptors were functional. Dose-response relations for the nAChR β 19′Lys(BODIPYFL) receptors were similar to those for wild-type receptors. We also studied nAChR β 19′Lys(BODIPYFL) receptors labeled with α -bungarotoxin monoconjugated with Alexa488 ( α BtxAlexa488). The nAChR has two α Btx binding sites, and puncta containing the Lys(BODIPYFL) labeled with α BtxAlexa488 yielded the expected three discrete photobleaching steps. We also performed positive control experiments with a nAChR containing enhanced green fluorescent protein in the γ -subunit M3-M4 loop, which confirmed our nAChR β 19′Lys(BODIPYFL) measurements. Thus, we report on the cell-based single-molecule detection of nAChR β 19′Lys(BODIPYFL).


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