satre's ner [19 articles] Export

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	Accelerating the annotation of sparse named entities by dynamic sentence selection. [My Copy] BMC bioinformatics, Vol. 9 Suppl 11 (2008) by Y. Tsuruoka, J. Tsujii, S. Ananiadou posted to annotation corpus learning ner nlp by satre on 2009-06-09 06:15:46 as along with 3 people and 1 group Effie druvus dullhunk NaCTeM
	Literature mining for the biologist: from information retrieval to biological discovery [My Copy] Nature Reviews Genetics, Vol. 7, No. 2. (01 February 2006), pp. 119-129. by Lars J. Jensen, Jasmin Saric, Peer Bork posted to annotation bionlp ner nlp pathway ppi review survey system-biology by satre on 2008-07-27 14:17:17 as along with 48 people and 4 groups krapnik tanyacovi6 MARCOUNAM eudominguezmartin sm-rush LEONRANGEL artaban421 rocling bertelsen virolog dipenps druvus Zephyrus fgibson psique lmichan cisevol ilyashl henk-cul daforerog isimpson dansullivanblk yggdrasil Enro guhjy kuhn yas dullhunk hpiwowar dgront caporaso zlu jacky957 lynnefox jdiggans cjeans ghattem michaelmampaey dejori jandot mircea farzanehs larsjuhljensen adoms skumagai TheresaNiederberger akastrin ibuch BergmanLab T_lab biomedical-nlp ADMiRes
	Text mining and its potential applications in systems biology. [My Copy] Trends in Biotechnology (11 October 2006) by Sophia Ananiadou, Douglas B. Kell, Junichi Tsujii posted to bionlp ner system-biology textmining by satre on 2008-07-27 13:52:18 as along with 17 people and 3 groups artaban421 eesruiz liblab henk-cul guhjy irenas jfr yas dullhunk fisherp jacky957 daniel_schober dejori pablomendes pmendes TheresaNiederberger alanrw ImagCom - Biomedical Text Computing dbk-lab T_lab
	A document retrieval system for man-machine interaction [My Copy] In Proceedings of the 1964 19th ACM national conference (1964) by G. Salton posted to informationextraction informationretrieval ner nlp textmining by satre on 2008-07-27 11:49:55 as
	Proceedings of the Seventh Message Understanding Conference [My Copy] (1998) by Nancy Chinchor edited by Ellen Voorhees posted to ie informationextraction informationretrieval ner nlp by satre on 2008-07-27 06:32:55 as along with 1 person wkiri
	Developing a Robust Part-of-Speech Tagger for Biomedical Text [My Copy] Advances in Informatics (2005), pp. 382-392. by Yoshimasa Tsuruoka, Yuka Tateishi, Jin-Dong Kim, et al.Tomoko Ohta, John McNaught, Sophia Ananiadou, Jun’ichi Tsujii posted to bionlp maximum-entropy-modeling ner parsing ppi textmining by satre on 2008-07-26 14:21:22 as along with 2 people johnkork farzanehs
	BIND--The Biomolecular Interaction Network Database [My Copy] Nucl. Acids Res., Vol. 29, No. 1. (1 January 2001), pp. 242-245. by Gary D. Bader, Ian Donaldson, Cheryl Wolting, B. Francis F. Ouellette, Tony Pawson, Christopher W. V. Hogue posted to database ner pathway ppi by satre on 2008-07-26 13:52:22 as along with 5 people stharward wnpx blackbart ruvido carlk
	Bidirectional inference with the easiest-first strategy for tagging sequence data [My Copy] In HLT '05: Proceedings of the conference on Human Language Technology and Empirical Methods in Natural Language Processing (2005), pp. 467-474. by Yoshimasa Tsuruoka, Jun'ichi Tsujii posted to machinelearning ner pos by satre on 2008-07-26 12:55:39 as
	Conditional Random Fields: Probabilistic Models for Segmenting and Labeling Sequence Data [My Copy] In ICML '01: Proceedings of the Eighteenth International Conference on Machine Learning (2001), pp. 282-289. by John D. Lafferty, Andrew Mccallum, Fernando C. N. Pereira posted to crf machinelearning ner pos by satre on 2008-07-26 12:54:24 as along with 4 people muraken robotact bsilverthorn dsha
	Filling the Gaps Between Tools and Users: A Tool Comparator, Using Protein-Protein Interactions as an Example [My Copy] In Proceedings of the Pacific Symposium on Biocomputing (PSB), No. 13. (2008), pp. 616-627. by Yoshinobu Kano, Ngan Nguyen, Rune Saetre, et al.Kazuhiro Yoshida, Yusuke Miyao, Yoshimasa Tsuruoka, Yuichiro Matsubayashi, Sophia Ananiadou, Jun'ichi Tsujii posted to aimed bionlp corpus dictionary ner parsing ppi svm textmining uima by satre on 2008-07-23 11:52:33 as along with 1 group dbmi-nlp
	Finding the evidence for protein-protein interactions from PubMed abstracts. [My Copy] Bioinformatics, Vol. 22, No. 14. (15 July 2006) by H. Jang, J. Lim, J. H. Lim, S. J. Park, K. C. Lee, S. H. Park posted to bionlp ner ppi by satre on 2008-07-22 22:30:50 as along with 1 person guhjy
	Detecting gene relations from Medline abstracts. [My Copy] Pac Symp Biocomput (2001), pp. 483-495. by M. Stephens, M. Palakal, S. Mukhopadhyay, R. Raje, J. Mostafa posted to bionlp ner ppi textmining by satre on 2008-07-22 21:53:55 as along with 2 people and 2 groups henk-cul yas dbmi-nlp T_lab
	Normalizing biomedical terms by minimizing ambiguity and variability [My Copy] BMC Bioinformatics, Vol. 9, No. Suppl 3. (2008) by Yoshimasa Tsuruoka, John Mcnaught, Sophia Ananiadou posted to bionlp dictionary ner textmining by satre on 2008-07-22 19:05:53 as along with 7 people and 2 groups Effie schwartzjmc cisevol yas dullhunk vlachmore guhjy NaCTeM BergmanLab
	Learning string similarity measures for gene/protein name dictionary look-up using logistic regression. [My Copy] Bioinformatics (12 August 2007) by Yoshimasa Tsuruoka, John McNaught, Jun'ichi Tsujii, Sophia Ananiadou posted to bionlp dictionary ner rulebased textmining by satre on 2008-07-22 19:04:25 as along with 5 people schwartzjmc guhjy dullhunk bhaddow vlachmore
	OpenDMAP: An open-source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-specific gene expression [My Copy] BMC Bioinformatics, Vol. 9 (31 January 2008), 78. by Lawrence Hunter, Zhiyong Lu, James Firby, et al.William A. Baumgartner, Helen L. Johnson, Philip V. Ogren, Bretonnel K. Cohen posted to biocreative bionlp ner ppi textmining uima by satre on 2008-07-22 14:54:31 as along with 6 people and 2 groups Effie druvus sobolevnrm thomaskelder guhjy yas NaCTeM baker-group
	Automatic extraction of biological information from scientific text: protein-protein interactions. [My Copy] Proc Int Conf Intell Syst Mol Biol (1999), pp. 60-67. by C. Blaschke, M. A. Andrade, C. Ouzounis, A. Valencia posted to bionlp ner ppi textmining by satre on 2008-07-22 11:57:46 as along with 6 people and 3 groups Enro miguel yas helliontroy bundschu TheresaNiederberger T_lab biomedical-nlp generif_paper
	Toward Routine Automatic Pathway Discovery from On-line Scientific Text Abstracts. [My Copy] Genome informatics. Workshop on Genome Informatics, Vol. 10 (1999), pp. 104-112. by S. K. Ng, M. Wong posted to bionlp dictionary ner pathtext ppi textmining ui-system by satre on 2008-07-21 15:09:46 as
	Assisted curation: does text mining really help? [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2008), pp. 556-567. by B. Alex, C. Grover, B. Haddow, et al.M. Kabadjov, E. Klein, M. Matthews, S. Roebuck, R. Tobin, X. Wang posted to bionlp ner ppi by satre on 2008-07-20 11:40:07 as along with 2 people and 1 group cngl-sf1 henk-cul dbmi-nlp
	Language independent NER using a maximum entropy tagger [My Copy] In Proceedings of the seventh conference on Natural language learning at HLT-NAACL 2003 (2003), pp. 164-167. by James R. Curran, Stephen Clark posted to bionlp memm ner by satre on 2008-07-19 10:53:16 as

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bionlp	44
ppi	38
textmining	31
ner	19
nlp	13
informationextraction	10
corpus	10
annotation	9
parsing	9
dictionary	8
review	7
rulebased	7
biocreative	7
informationretrieval	6
svm	6
ie	5
pathway	4
pos	4
uima	4
database	3
pathtext	3
ui-system	3
aimed	3
machinelearning	2
stemming	2
survey	2
fulltext	2
system-biology	2
biology	1
medicalrecords	1
akane	1
evaluation	1
relationextraction	1
pasbio	1
ontology	1
go-code-assignmen	1
memm	1
crf	1
unsupervised	1
phosphorylation	1
ibm	1
maximum-entropy-modeling	1
learning	1

satre's ner [19 articles] Export

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