saunders's protein [71 articles] Export

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	The secondary structure of mRNAs from Escherichia coli: its possible role in increasing the accuracy of translation. [My Copy] Nucleic acids research, Vol. 13, No. 1. (11 January 1985), pp. 275-288. by E. G. Shpaer posted to translation structure secondary protein mrna by saunders on 2009-11-18 16:56:22 as
	Statistical correlation between protein secondary structure and messenger RNA stem-loop structure. [My Copy] Biopolymers, Vol. 73, No. 1. (January 2004), pp. 16-26. by Mengwen Jia, Liaofu Luo, Ciquan Liu posted to structure stem secondary protein mrna loop by saunders on 2009-11-18 16:12:32 as along with 1 person bpcusack
	An Integrated Sequence-Structure Database incorporating matching mRNA sequence, amino acid sequence and protein three-dimensional structure data. [My Copy] Nucleic acids research, Vol. 26, No. 1. (1 January 1998), pp. 327-331. by I. A. Adzhubei, A. A. Adzhubei, S. Neidle posted to protein mrna database csands by saunders on 2009-11-18 16:11:32 as
	The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases. [My Copy] BMC bioinformatics, Vol. 8, No. 1. (2007) by Richard G. Côté, Philip Jones, Lennart Martens, et al.Samuel Kerrien, Florian Reisinger, Quan Lin, Rasko Leinonen, Rolf Apweiler, Henning Hermjakob posted to protein picr cross-reference by saunders on 2009-11-12 19:07:41 as along with 12 people robert druvus whoare chad_davis guhjy dullhunk niallhaslam antonkratz barriot dansullivanblk tny kynn
	GTOP: a database of protein structures predicted from genome sequences. [My Copy] Nucleic acids research, Vol. 30, No. 1. (1 January 2002), pp. 294-298. by Takeshi Kawabata, Satoshi Fukuchi, Keiichi Homma, et al.Motonori Ota, Jiro Araki, Takehiko Ito, Nobuyuki Ichiyoshi, Ken Nishikawa posted to structure protein mrna gtop database by saunders on 2009-11-12 18:33:15 as along with 1 person tny
	The GTOP database in 2009: updated content and novel features to expand and deepen insights into protein structures and functions. [My Copy] Nucleic acids research, Vol. 37, No. Database issue. (January 2009) by Satoshi Fukuchi, Keiichi Homma, Shigetaka Sakamoto, et al.Hideaki Sugawara, Yoshio Tateno, Takashi Gojobori, Ken Nishikawa posted to structure protein mrna gtop database by saunders on 2009-11-12 18:32:14 as along with 2 people tprpip guhjy
	A brighter future for protein structure prediction [My Copy] Nature Structural & Molecular Biology, Vol. 6, No. 2. (01 February 1999), pp. 108-111. by Patrice Koehl, Michael Levitt posted to structure protein prediction holy grail by saunders on 2009-11-12 17:44:40 as
	Predicting protein three-dimensional structure [My Copy] Current Opinion in Biotechnology, Vol. 10, No. 6. (1 December 1999), pp. 583-588. by J. Moult posted to structure protein prediction holy grail by saunders on 2009-11-12 17:43:59 as
	Progress in protein structure prediction. [My Copy] Current opinion in structural biology, Vol. 7, No. 3. (June 1997), pp. 377-387. by D. T. Jones posted to structure protein prediction holy grail by saunders on 2009-11-12 17:40:00 as along with 1 person j3xucite
	Protein structure prediction begins well but ends badly [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 999A. (2009), NA. by Rhodri Saunders, Charlotte M. Deane posted to tertiary structure secondary protein prediction casp bias by saunders on 2009-11-12 14:21:03 as along with 1 group OPIG
	Cotranslational Folding of Proteins [My Copy] Biochemistry (Moscow), Vol. 65, No. 12. (1 December 2000), pp. 1380-1384. by M. A. Basharov posted to timing protein folding co-translation by saunders on 2009-11-11 13:11:04 as
	An expanding arsenal of experimental methods yields an explosion of insights into protein folding mechanisms. [My Copy] Nature structural & molecular biology, Vol. 16, No. 6. (03 June 2009), pp. 582-588. by Alice I. Bartlett, Sheena E. Radford posted to techniques protein global folding experimental by saunders on 2009-11-10 14:02:05 as along with 3 people skywalkerus02 siggi84 melo_mcr
	Structural determinants of protein folding. [My Copy] Cellular and molecular life sciences : CMLS, Vol. 66, No. 14. (1 July 2009), pp. 2341-2361. by Tse Siang S. Kang, R. Manjunatha Kini posted to structure review protein function folding by saunders on 2009-11-10 13:51:48 as along with 1 person skywalkerus02
	Structural dynamics and folding of beta-lactoglobulin probed by heteronuclear NMR. [My Copy] Biochimica et biophysica acta, Vol. 1790, No. 6. (June 2009), pp. 527-537. by Kazumasa Sakurai, Tsuyoshi Konuma, Masanori Yagi, Yuji Goto posted to protein nmr folding dynamics by saunders on 2009-11-10 13:49:26 as
	A synonymous polymorphism in a common MDR1 (ABCB1) haplotype shapes protein function. [My Copy] Biochimica et biophysica acta, Vol. 1794, No. 5. (May 2009), pp. 860-871. by King Leung L. Fung, Michael M. Gottesman posted to synonymous structure protein mutation mdr1 abcb1 by saunders on 2009-11-10 13:48:44 as
	The ribosome as a platform for co-translational processing, folding and targeting of newly synthesized proteins. [My Copy] Nature structural & molecular biology, Vol. 16, No. 6. (June 2009), pp. 589-597. by Günter Kramer, Daniel Boehringer, Nenad Ban, Bernd Bukau posted to role ribosome review protein folding co-translational by saunders on 2009-11-10 13:10:28 as along with 4 people siggi84 bratwurst redondoself reyez
	Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. [My Copy] Bioinformatics, Vol. 22, No. 13. (1 July 2006), pp. 1658-1659. by W. Li, A. Godzik posted to protein nucleotide clustering by saunders on 2009-11-02 09:46:49 as along with 6 people and 2 groups pablocarb guhjy eweaver indigoviolet caporaso gisle EisenLab biomedical-nlp
	Studies on the relationships between the synonymous codon usage and protein secondary structural units. [My Copy] Biochemical and biophysical research communications, Vol. 269, No. 3. (24 March 2000), pp. 692-696. by S. K. Gupta, S. Majumdar, T. K. Bhattacharya, T. C. Ghosh posted to usage structure protein codon by saunders on 2009-10-26 18:17:26 as along with 1 person gpalidwor
	Silent mutations result in HlyA hypersecretion by reducing intracellular HlyA protein aggregates. [My Copy] Biotechnology and bioengineering, Vol. 101, No. 5. (1 December 2008), pp. 967-974. by Prateek Gupta, Kelvin H. Lee posted to tructure synonymous secretion protein mutation function by saunders on 2009-10-26 12:20:23 as
	Protein structure and the sequential structure of mRNA: alpha-helix and beta-sheet signals at the nucleotide level. [My Copy] Proteins, Vol. 25, No. 2. (June 1996), pp. 237-252. by S. Brunak, J. Engelbrecht posted to usage structure protein machine link learning codon by saunders on 2009-10-23 11:06:15 as along with 2 people jengeldk msafi
	Non-random usage of 'degenerate' codons is related to protein three-dimensional structure [My Copy] pp. 78-82. by A. A. Adzhubei posted to usage structure protein link codon by saunders on 2009-10-23 10:56:09 as along with 1 person msafi
	Universal function-specificity of codon usage. [My Copy] Nucleic acids research (22 September 2009), gkp792. by Hamed Shateri S. Najafabadi, Hani Goodarzi, Reza Salavati posted to usage translation speed protein expression codon by saunders on 2009-10-06 15:40:14 as along with 1 person hrogers
	A peptide deformylase-ribosome complex reveals mechanism of nascent chain processing. [My Copy] Nature, Vol. 452, No. 7183. (6 March 2008), pp. 108-111. by R. Bingel-Erlenmeyer, R. Kohler, G. Kramer, et al.A. Sandikci, S. Antolić, T. Maier, C. Schaffitzel, B. Wiedmann, B. Bukau, N. Ban posted to folding mrna processing protein by saunders on 2009-07-03 15:01:41 as along with 1 person Evangelia
	15N NMR Spin Relaxation Dispersion Study of the Molecular Crowding Effects on Protein Folding under Native Conditions [My Copy] J. Am. Chem. Soc., Vol. 128, No. 12. (29 March 2006), pp. 3916-3917. by X. Ai, Z. Zhou, Y. Bai, W. Y. Choy posted to crowding molecular nmr protein stability by saunders on 2009-06-30 16:47:25 as along with 1 person cactus
	Theory and simulation of macromolecular crowding effects on protein folding stability and kinetics [My Copy] (26 Feb 2009) by Jeetain Mittal, Robert B. Best posted to crowding model molecular protein stability by saunders on 2009-06-30 16:46:50 as along with 2 people iantunbridge EricaJSaltzman
	Implications of macromolecular crowding for protein assembly [My Copy] Current Opinion in Structural Biology, Vol. 10, No. 1. (1 February 2000), pp. 34-39. by A. Minton posted to crowding molecular protein stability by saunders on 2009-06-30 16:45:57 as along with 1 person ras
	Macromolecular crowding: obvious but underappreciated [My Copy] Trends in Biochemical Sciences, Vol. 26, No. 10. (1 October 2001), pp. 597-604. by John R. Ellis posted to crowding folding molecular protein stability by saunders on 2009-06-30 16:38:11 as along with 2 people ras ocs
	Molecular crowding enhances native structure and stability of alpha/ protein flavodoxin [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 48. (27 November 2007), pp. 18976-18981. by Loren Stagg, Shao-Qing Zhang, Margaret S. Cheung, Pernilla Wittung-Stafshede posted to crowding folding protein stability by saunders on 2009-06-30 16:37:47 as along with 2 people cactus min013
	Fast Folding of the Two-domain Semliki Forest Virus Capsid Protein Explains Co-translational Proteolytic Activity, [My Copy] Journal of Molecular Biology, Vol. 338, No. 1. (16 April 2004), pp. 159-167. by Ignacio E. Sanchez, Manuel Morillas, Eva Zobeley, Thomas Kiefhaber, Rudi Glockshuber posted to co-translation evidence folding protein semliki by saunders on 2009-06-02 16:15:38 as along with 1 person choonpeng
	TOUCHSTONE: An ab initio protein structure prediction method that uses threading-based tertiary restraints [My Copy] Proceedings of the National Academy of Sciences, Vol. 98, No. 18. (28 August 2001), pp. 10125-10130. by Daisuke Kihara, Hui Lu, Andrzej Kolinski, Jeffrey Skolnick posted to prediction protein speed structure by saunders on 2009-05-05 11:57:37 as along with 1 person j3xucite
	Protein structure prediction and structural genomics. [My Copy] Science, Vol. 294, No. 5540. (5 October 2001), pp. 93-96. by D. Baker, A. Sali posted to prediction progress protein speed structure time by saunders on 2009-05-05 11:56:07 as along with 11 people and 2 groups mijam newton1234 taikoo ana vavi dgront sriram_s mirzazadeh mingzhi granujilla janasont structural_bioinformatics Bioinformatics
	Protein secondary structure prediction with a neural network. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 86, No. 1. (January 1989), pp. 152-156. by L. H. Holley, M. Karplus posted to amino bias prediction protein secondary structure terminal by saunders on 2009-04-02 16:21:12 as
	A physical basis for protein secondary structure. [My Copy] Proc Natl Acad Sci U S A, Vol. 96, No. 25. (7 December 1999), pp. 14258-14263. by R. Srinivasan, G. D. Rose posted to effects folding mediated protein sequence structure by saunders on 2009-04-02 16:17:59 as along with 2 people and 1 group Diego_Prada Einat structural_bioinformatics
	Residue-specific contact order and contact breadth in single-domain proteins: implications for folding as a function of chain elongation. [My Copy] Biotechnology progress, Vol. 24, No. 3. (n 2008), pp. 570-575. by N. Kurt, B. C. Mounce, P. A. Ellison, S. Cavagnero posted to contact cotranslation domains order protein by saunders on 2009-03-01 10:19:52 as
	Cooperativity in protein-folding kinetics. [My Copy] Proc Natl Acad Sci U S A, Vol. 90, No. 5. (1 March 1993), pp. 1942-1946. by K. A. Dill, K. M. Fiebig, H. S. Chan posted to cooperativity folding model protein by saunders on 2009-02-25 15:09:54 as along with 2 people timonkarnezos mirzazadeh
	Models of cooperativity in protein folding. [My Copy] Philosophical transactions of the Royal Society of London. Series B, Biological sciences, Vol. 348, No. 1323. (29 April 1995), pp. 61-70. by H. S. Chan, S. Bromberg, K. A. Dill posted to cooperativity folding model protein by saunders on 2009-02-25 15:09:23 as
	Protein folding. [My Copy] Journal of cellular and molecular medicine, Vol. 7, No. 3. (p 2003), pp. 223-237. by M. A. Basharov posted to folding protein review time time-scale translation by saunders on 2009-02-24 18:54:14 as
	Protein Folding−Simulation [My Copy] Chemical Reviews, Vol. 106, No. 5. (1 May 2006), pp. 1898-1916. by Valerie Daggett posted to folding protein simulation by saunders on 2009-02-24 14:26:43 as along with 2 people stharward choonpeng
	Modeling protein folding: the beauty and power of simplicity. [My Copy] Folding & design, Vol. 1, No. 3. (1996) by E. I. Shakhnovich posted to folding modelling protein by saunders on 2009-02-24 14:21:36 as
	Protein Folding Thermodynamics and Dynamics: Where Physics, Chemistry, and Biology Meet [My Copy] Chemical Reviews, Vol. 106, No. 5. (1 May 2006), pp. 1559-1588. by Eugene Shakhnovich posted to biology chemistry folding physics protein review by saunders on 2009-02-24 14:17:26 as along with 2 people reyez krapnik
	Scoring function for automated assessment of protein structure template quality [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 57, No. 4., pp. 702-710. by Yang Zhang, Jeffrey Skolnick posted to alignment function gdt_ts protein scoring tmscore by saunders on 2009-01-15 15:53:55 as along with 8 people and 2 groups pjcite reyez karbak marcius dgront aengisch rabio granujilla BioinfoCIPF SGU-CIPF
	Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features [My Copy] Biopolymers, Vol. 22, No. 12. (December 1983), pp. 2577-2637. by Wolfgang Kabsch, Christian Sander posted to dssp protein structure by saunders on 2009-01-15 10:51:52 as along with 32 people barmak7282 Vadikus j3xucite scampos TLVincent maria_hauser pablocarb rpetrenko carlosjavierna mijam wqia007 dsmueller niallhaslam jwm sebk Diego_Prada pjcite kaarsinogen lna chad_davis wouterboomsma penka ffranca dgront choonpeng rabio gisle medic0747 martainn chgjb mschofie marti
	The influence of amino-acid sequence on protein structure. [My Copy] Biophysical journal, Vol. 5, No. 6. (November 1965), pp. 809-822. by A. V. Guzzo posted to background prediction protein secondary structure by saunders on 2009-01-06 12:16:20 as
	Fully automated ab initio protein structure prediction using I-SITES, HMMSTR and ROSETTA. [My Copy] Bioinformatics (Oxford, England), Vol. 18 Suppl 1 (2002) by C. Bystroff, Y. Shao posted to prediction protein server structure by saunders on 2009-01-06 10:03:23 as
	Protein Structure Prediction Using Rosetta [My Copy] Methods Enzymol In Numerical Computer Methods, Part D, Vol. 383 (2004), pp. 66-93. by C. Rohl, C. Strauss, K. Misura, D. Baker posted to prediction protein rosetta structure by saunders on 2008-07-08 15:02:11 as along with 7 people mijam granujilla bullli502 nigham thaliana dgront JimmyMac
	PHD: predicting one-dimensional protein structure by profile-based neural networks. [My Copy] Methods in enzymology, Vol. 266 (1996), pp. 525-539. by B. Rost posted to phd prediction protein structure by saunders on 2008-07-01 16:34:41 as
	The bacterial translocase: a dynamic protein channel complex. [My Copy] Cellular and molecular life sciences : CMLS, Vol. 60, No. 10. (October 2003), pp. 2034-2052. by J. de Keyzer, C. van der Does, A. J. Driessen posted to protein sec translocation vectorial by saunders on 2008-06-11 10:52:24 as
	Break on through to the other side--the Sec translocon. [My Copy] Trends in biochemical sciences, Vol. 29, No. 5. (May 2004), pp. 221-223. by J. Eichler, F. Duong posted to bacteria protein sec translocation vectorial by saunders on 2008-06-11 10:48:03 as
	Sequence and structure patterns in proteins from an analysis of the shortest helices: implications for helix nucleation. [My Copy] Journal of molecular biology, Vol. 326, No. 1. (7 February 2003), pp. 273-291. by L. Pal, P. Chakrabarti, G. Basu posted to directionality helices initiation n-terminal protein by saunders on 2008-06-03 15:07:12 as
	Detecting and measuring cotranslational protein degradation in vivo. [My Copy] Science (New York, N.Y.), Vol. 289, No. 5487. (22 September 2000), pp. 2117-2120. by G. C. Turner, A. Varshavsky posted to co-translation degradation folding protein vivo by saunders on 2008-06-03 15:05:03 as

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bibtex-import	153
protein	71
folding	53
structure	53
codon	42
usage	38
prediction	32
co-translation	24
mrna	24
secondary	20
model	13
ribosome	13
review	11
sse	9
translation	8
experiment	7
bias	6
cotranslation	6
crowding	6
hp	6
trna	6
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database	5
evolution	5
molecular	5
stability	5
vivo	5
casp	4
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nmr	4
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vectorial	3
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cluster	1
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complexity	1
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stem	1
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terminal	1
termini	1
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tmscore	1
transition	1
trembl	1
tructure	1
unstructured	1
virus	1
visualisation	1
vitro	1
water	1
yeast	1
zhang	1

saunders's protein [71 articles] Export

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