scampos's library 268 articles Export

	Partial denaturation of transthyretin is sufficient for amyloid fibril formation in vitro [My Copy] Biochemistry, Vol. 31, No. 36. (1 September 1992), pp. 8654-8660. by Wilfredo Colon, Jeffery W. Kelly posted to no-tag by scampos on 2009-11-11 20:26:52 as
	Acyl chain order parameter profiles in phospholipid bilayers: computation from molecular dynamics simulations and comparison with \textsuperscript2H NMR experiments [My Copy] European Biophysics Journal, Vol. 36, No. 8. (1 November 2007), pp. 919-931. by Louic S. Vermeer, Bert L. de Groot, Valérie Réat, Alain Milon, Jerzy Czaplicki posted to no-tag by scampos on 2009-11-03 15:09:43 as along with 2 people dimka softsimu
	Lateral diffusion in binary mixtures of cholesterol and phosphatidylcholines [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 76, No. 1. (January 1979), pp. 15-18. by J. L. Rubenstein, B. A. Smith, H. M. McConnell posted to no-tag by scampos on 2009-11-03 15:04:50 as
	Use of a fluorescent cholesterol derivative to measure lateral mobility of cholesterol in membranes [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 79, No. 17. (September 1982), pp. 5171-5174. by M. R. Alecio, D. E. Golan, W. R. Veatch, R. R. Rando posted to no-tag by scampos on 2009-11-03 15:02:18 as
	Microscopic versus macroscopic diffusion in one-component fluid phase lipid bilayer membranes [My Copy] Biophysical Journal, Vol. 60, No. 6. (December 1991), pp. 1553-1554. by W. L. Vaz, P. F. Almeida posted to no-tag by scampos on 2009-11-03 14:54:45 as
	Molecular dynamics of lipid bilayers studied by incoherent quasi-elastic neutron scattering [My Copy] Journal de Physique II, Vol. 2, No. 8. (August 1992), pp. 1589-1615. by S. König, W. Pfeiffer, T. Bayer, D. Richter, E. Sackmann posted to no-tag by scampos on 2009-11-03 14:51:42 as
	Quasielastic neutron scattering measurements of fast local translational diffusion of lipid molecules in phospholipid bilayers. [My Copy] Biochimica et biophysica acta, Vol. 1063, No. 1. (18 March 1991), pp. 67-72. by J. Tabony, B. Perly posted to no-tag by scampos on 2009-11-03 14:48:25 as
	Lecithin bilayers. Density measurement and molecular interactions [My Copy] Biophysical Journal, Vol. 23, No. 2. (August 1978), pp. 159-175. by J. F. Nagle, D. A. Wilkinson posted to no-tag by scampos on 2009-11-03 14:39:01 as
	Hydration forces between phospholipid bilayers [My Copy] Biochimica et Biophysica Acta (BBA) - Reviews on Biomembranes, Vol. 988, No. 3. (06 December 1989), pp. 351-376. by R. P. Rand, V. A. Parsegian posted to no-tag by scampos on 2009-11-03 14:35:13 as along with 2 people dimka softsimu
	Lipid bilayer thickness varies linearly with acyl chain length in fluid phosphatidylcholine vesicles. [My Copy] Journal of molecular biology, Vol. 166, No. 2. (15 May 1983), pp. 211-217. by B. A. Lewis, D. M. Engelman posted to no-tag by scampos on 2009-11-03 14:29:52 as
	Conformational Analysis in a Multidimensional Energy Landscape: Study of an Arginylglutamate Repeat [My Copy] The Journal of Physical Chemistry B, Vol. 0, No. 0. (0000) by Sara R. R. Campos, António M. Baptista posted to no-tag by scampos on 2009-11-03 14:27:00 as
	Electron transfers in chemistry and biology [My Copy] Biochimica et Biophysica Acta (BBA) - Reviews on Bioenergetics, Vol. 811, No. 3. (01 August 1985), pp. 265-322. by Marcus posted to no-tag by scampos on 2009-11-03 14:23:55 as
	Areas, Volumes, Packing, and Protein Structure [My Copy] Annual Review of Biophysics and Bioengineering, Vol. 6, No. 1. (1977), pp. 151-176. by F. M. Richards posted to no-tag by scampos on 2009-11-03 14:13:54 as along with 3 people and 1 group flbarroso Lombardo_7 sobolevnrm baker-group
	Influence of Long-Range Electrostatic Treatments on the Folding of the N-Terminal H4 Histone Tail Peptide [My Copy] Journal of Chemical Theory and Computation, Vol. 2, No. 2. (1 March 2006), pp. 246-250. by Roberto D. Lins, Ursula Rothlisberger posted to no-tag by scampos on 2009-10-21 12:49:16 as
	Influence of Artificial Periodicity and Ionic Strength in Molecular Dynamics Simulations of Charged Biomolecules Employing Lattice-Sum Methods [My Copy] The Journal of Physical Chemistry B, Vol. 108, No. 2. (1 January 2004), pp. 774-788. by Mika A. Kastenholz, Philippe H. Hunenberger posted to no-tag by scampos on 2009-10-21 12:47:40 as
	Effect of artificial periodicity in simulations of biomolecules under Ewald boundary conditions: a continuum electrostatics study [My Copy] Biophysical Chemistry, Vol. 78, No. 1-2. (5 April 1999), pp. 69-88. by P. Hünenberger posted to no-tag by scampos on 2009-10-21 12:45:44 as along with 2 people r2s2 RamuAnandakrishnan
	Molecular Dynamics Simulations of the Anticodon Hairpin of tRNAAsp: Structuring Effects of C−H...O Hydrogen Bonds and of Long-Range Hydration Forces [My Copy] Journal of the American Chemical Society, Vol. 118, No. 5. (1 January 1996), pp. 1181-1189. by Pascal Auffinger, Shirley Louise-May, Eric Westhof posted to no-tag by scampos on 2009-10-21 12:42:28 as
	Calculations of nucleic acid conformations [My Copy] Current Opinion in Structural Biology, Vol. 6, No. 3. (June 1996), pp. 289-298. by S. Louise-May posted to no-tag by scampos on 2009-10-21 12:41:11 as
	Methodological advances in molecular dynamics simulations of biological systems [My Copy] Current Opinion in Structural Biology, Vol. 5, No. 2. (April 1995), pp. 211-215. by C. Brooks posted to no-tag by scampos on 2009-10-21 12:39:51 as
	Regulating the Conformation of Prion Protein through Ligand Binding [My Copy] The Journal of Physical Chemistry B, Vol. 113, No. 39. (1 October 2009), pp. 12853-12856. by Norifumi Yamamoto, Kazuo Kuwata posted to no-tag by scampos on 2009-10-20 12:39:47 as
	Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features [My Copy] Biopolymers, Vol. 22, No. 12. (December 1983), pp. 2577-2637. by Wolfgang Kabsch, Christian Sander posted to no-tag by scampos on 2009-10-16 16:38:13 as along with 33 people dfdong barmak7282 Vadikus j3xucite TLVincent maria_hauser pablocarb rpetrenko carlosjavierna mijam wqia007 dsmueller niallhaslam saunders jwm sebk Diego_Prada pjcite kaarsinogen lna chad_davis wouterboomsma penka ffranca dgront choonpeng rabio gisle medic0747 martainn chgjb mschofie marti
	Statistical thermodynamics. Taking a walk on a landscape. [My Copy] Science (New York, N.Y.), Vol. 293, No. 5530. (27 July 2001), pp. 612-613. by C. L. Brooks, J. N. Onuchic, D. J. Wales posted to no-tag by scampos on 2009-09-28 16:08:16 as
	The kinetics of formation of native ribonuclease during oxidation of the reduced polypeptide chain. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 47 (15 September 1961), pp. 1309-1314. by C. B. ANFINSEN, E. HABER, M. SELA, F. H. WHITE posted to no-tag by scampos on 2009-09-28 15:20:16 as along with 3 people cactus mcbla GeeSharpMinor
	Constant-pH molecular dynamics simulations: a test case of succinic acid [My Copy] Chemical Physics, Vol. 302, No. 1-3. (12 July 2004), pp. 161-170. by M. Dlugosz, J. Antosiewicz posted to no-tag by scampos on 2009-09-21 15:38:20 as
	Simulating proteins at constant pH: An approach combining molecular dynamics and Monte Carlo simulation [My Copy] Proteins: Structure, Function, and Genetics, Vol. 47, No. 4. (2002), pp. 469-480. by Roland Bürgi, Peter A. Kollman, Wilfred F. van Gunsteren posted to no-tag by scampos on 2009-09-21 15:37:17 as
	Explicit-solvent molecular dynamics simulation at constant pH: Methodology and application to small amines [My Copy] The Journal of Chemical Physics, Vol. 114, No. 22. (2001), pp. 9706-9719. by Ulf Börjesson, Philippe H. Hünenberger posted to no-tag by scampos on 2009-09-21 15:36:00 as
	Constant-pH molecular dynamics using continuous titration coordinates [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 56, No. 4. (2004), pp. 738-752. by Michael S. Lee, Freddie R. Salsbury, Charles L. Brooks posted to no-tag by scampos on 2009-09-21 15:34:16 as
	Constant pH molecular dynamics in generalized Born implicit solvent [My Copy] Journal of Computational Chemistry, Vol. 25, No. 16. (2004), pp. 2038-2048. by John Mongan, David A. Case, J. Andrew McCammon posted to no-tag by scampos on 2009-09-21 15:33:03 as
	Simulation of protein conformational freedom as a function of pH: constant-pH molecular dynamics using implicit titration [My Copy] Proteins: Structure, Function, and Genetics, Vol. 27, No. 4. (1997), pp. 523-544. by António M. Baptista, Paulo J. Martel, Steffen B. Petersen posted to no-tag by scampos on 2009-09-21 15:32:29 as
	Prion Protein-Detergent Micelle Interactions Studied by NMR in Solution [My Copy] J. Biol. Chem., Vol. 284, No. 34. (21 August 2009), pp. 22713-22721. by Simone Hornemann, Christine von Schroetter, Fred F. Damberger, Kurt Wuthrich posted to no-tag by scampos on 2009-09-01 15:50:59 as along with 1 person paulschlesinger
	Distinct Structures of Scrapie Prion Protein (PrPSc)-seeded Versus Spontaneous Recombinant Prion Protein Fibrils Revealed by Hydrogen/Deuterium Exchange [My Copy] J. Biol. Chem., Vol. 284, No. 36. (4 September 2009), pp. 24233-24241. by Vytautas Smirnovas, Jae-Il Kim, Xiaojun Lu, Ryuichiro Atarashi, Byron Caughey, Witold K. Surewicz posted to no-tag by scampos on 2009-09-01 15:50:02 as along with 1 person applebyb
	Conformational Properties of beta-PrP [My Copy] J. Biol. Chem., Vol. 284, No. 33. (14 August 2009), pp. 21981-21990. by Laszlo L. P. Hosszu, Clare R. Trevitt, Samantha Jones, et al.Mark Batchelor, David J. Scott, Graham S. Jackson, John Collinge, Jonathan P. Waltho, Anthony R. Clarke posted to no-tag by scampos on 2009-08-31 16:42:04 as
	The consistency of large concerted motions in proteins in molecular dynamics simulations [My Copy] Biophysical Journal, Vol. 71, No. 4. (October 1996), pp. 1707-1713. by B. Degroot posted to no-tag by scampos on 2009-08-12 16:35:40 as
	On the convergence of the conformational coordinates basis set obtained by the essential dynamics analysis of proteins' molecular dynamics simulations [My Copy] Proteins: Structure, Function, and Genetics, Vol. 36, No. 4. (1999), pp. 419-424. by Andrea Amadei, Marc A. Ceruso, Alfredo Di Nola posted to no-tag by scampos on 2009-08-12 16:35:16 as along with 1 person ttjoseph
	Prediction of Ph-dependent Properties of Proteins [My Copy] Journal of Molecular Biology, Vol. 238, No. 3. (5 May 1994), pp. 415-436. by J. Antosiewicz posted to electrostatics_proteins by scampos on 2009-08-05 17:01:02 as along with 2 people dfgreen RamuAnandakrishnan
	Modeling electrostatic effects in proteins [My Copy] Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics, Vol. 1764, No. 11. (November 2006), pp. 1647-1676. by A. Warshel, P. Sharma, M. Kato, W. Parson posted to electrostatics_proteins by scampos on 2009-08-05 16:46:42 as along with 2 people flbarroso carterb
	Electrostatic Effects in Proteins [My Copy] Annual Review of Biophysics and Biophysical Chemistry, Vol. 14, No. 1. (1985), pp. 387-417. by J. B. Matthew posted to electrostatics_proteins by scampos on 2009-08-05 16:40:52 as
	Protein Ionizable Groups: pK Values and Their Contribution to Protein Stability and Solubility [My Copy] Journal of Biological Chemistry, Vol. 284, No. 20. (15 May 2009), pp. 13285-13289. by C. Nick Pace, Gerald R. Grimsley, J. Martin Scholtz posted to electrostatics_proteins by scampos on 2009-08-05 16:38:07 as along with 6 people and 3 groups pjkiley klexa nanonan barry sobolevnrm paulschlesinger structural_bioinformatics McCammon baker-group
	Electrostatic Energy and Macromolecular Function [My Copy] Annual Review of Biophysics and Biophysical Chemistry, Vol. 20, No. 1. (1991), pp. 267-298. by A. Warshel, J. Aqvist posted to electrostatics_proteins by scampos on 2009-08-05 16:37:50 as along with 1 person flbarroso
	Electrostatic effects in proteins: comparison of dielectric and charge models. [My Copy] Protein Eng, Vol. 4, No. 8. (December 1991), pp. 903-910. by E. L. Mehler, T. Solmajer posted to electrostatics_proteins by scampos on 2009-08-05 16:37:20 as along with 2 people flbarroso papatonyhill
	Protein Electrostatics [My Copy] In Biotechnology Annual Review Volume 2, Vol. 2 (1996), pp. 315-372. by P. Martel, A. Baptista, S. Petersen posted to electrostatics_proteins by scampos on 2009-08-05 16:36:56 as along with 1 person flbarroso
	Protein electrostatics [My Copy] Theoretical and Computational Chemistry, Vol. 3 (1996), pp. 333-369. by G. Narayszabo posted to electrostatics_proteins by scampos on 2009-08-05 16:36:07 as along with 1 person flbarroso
	Electrostatic Interactions in Macromolecules: Theory and Applications [My Copy] Annual Review of Biophysics and Biophysical Chemistry, Vol. 19, No. 1. (1990), pp. 301-332. by K. A. Sharp, B. Honig posted to electrostatics_proteins by scampos on 2009-08-05 16:35:32 as along with 3 people flbarroso dfgreen RamuAnandakrishnan
	The Determinants of pKas in Proteins† [My Copy] Biochemistry, Vol. 35, No. 24. (1 January 1996), pp. 7819-7833. by Jan Antosiewicz, J. Andrew Mccammon, Michael K. Gilson posted to electrostatics_proteins by scampos on 2009-08-05 16:34:58 as along with 4 people flbarroso onufriev dfgreen RamuAnandakrishnan
	pKa's of ionizable groups in proteins: atomic detail from a continuum electrostatic model [My Copy] Biochemistry, Vol. 29, No. 44. (1 November 1990), pp. 10219-10225. by Donald Bashford, Martin Karplus posted to electrostatics_proteins by scampos on 2009-08-05 16:34:33 as along with 3 people girayenkavi flbarroso dsmueller
	Benchmarking pKa Prediction Methods for Residues in Proteins [My Copy] Journal of Chemical Theory and Computation, Vol. 4, No. 6. (1 June 2008), pp. 951-966. by Courtney L. Stanton, Kendall N. Houk posted to electrostatics_proteins by scampos on 2009-08-05 16:20:34 as along with 4 people and 1 group flbarroso franklu310 onufriev sobolevnrm baker-group
	Theory of Protein Titration Curves. II. Calculations for Simple Models at Low Ionic Strength [My Copy] Journal of the American Chemical Society, Vol. 79, No. 20. (1 October 1957), pp. 5340-5347. by Charles Tanford posted to electrostatics_proteins by scampos on 2009-08-05 16:20:13 as along with 1 person flbarroso
	IONIC EFFECTS BEYOND POISSON-BOLTZMANN THEORY [My Copy] Annual Review of Physical Chemistry, Vol. 50, No. 1. (1999), pp. 145-165. by Vojko Vlachy posted to electrostatics_proteins by scampos on 2009-08-05 16:19:53 as along with 3 people ras flbarroso softsimu
	Electrostatic effects in proteins [My Copy] Science, Vol. 201, No. 4362. (29 September 1978), pp. 1187-1191. by M. F. Perutz posted to electrostatics_proteins by scampos on 2009-08-05 16:19:11 as along with 1 person flbarroso
	On the pH dependence of protein stability. [My Copy] Journal of molecular biology, Vol. 231, No. 2. (20 May 1993), pp. 459-474. by A. S. Yang, B. Honig posted to electrostatics_proteins by scampos on 2009-08-05 16:18:47 as along with 3 people and 1 group onufriev flbarroso cat_worth structural_bioinformatics

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