CiteULike: sebastien_vigneau's repeat [13 articles]

DXZ4 chromatin adopts an opposing conformation to that of the surrounding chromosome and acquires a novel inactive X-specific role involving CTCF and antisense transcripts.

Genome research, Vol. 18, No. 8. (August 2008), pp. 1259-1269.

by Brian P. Chadwick

posted to xci x-chromosome repeat methylation macrosatellite inactivation heterochromatin euchromatin dxz4 ctcf cpg-methylation cpg by sebastien_vigneau on 2009-08-18 16:27:27 as

along with 2 groups X-chromosome inactivation CTCF

Integration of the cytogenetic map with the draft human genome sequence.

Human molecular genetics, Vol. 12, No. 9. (1 May 2003), pp. 1037-1044.

by T. S. Furey, D. Haussler

posted to cg cytogenetics g-banding gc line repeat sine by sebastien_vigneau on 2009-07-08 16:17:58 as read

along with 2 people and 2 groups polivares cisevol JLab BergmanLab

CTCF-binding sites flank CTG/CAG repeats and form a methylation-sensitive insulator at the DM1 locus.

Nature genetics, Vol. 28, No. 4. (August 2001), pp. 335-343.

by G. N. Filippova, C. P. Thienes, B. H. Penn, et al.D. H. Cho, Y. J. Hu, J. M. Moore, T. R. Klesert, V. V. Lobanenkov, S. J. Tapscott

posted to cag ctcf ctg dm1 repeat by sebastien_vigneau on 2009-06-23 00:45:16 as read

along with 1 group CTCF

Intact recombineering of highly repetitive DNA requires reduced induction of recombination enzymes and improved host viability.

Analytical biochemistry, Vol. 375, No. 2. (15 April 2008), pp. 394-396.

by K. Narayanan

posted to knock-out protocol recombination recombineering repeat technology by sebastien_vigneau on 2008-06-24 15:56:30 as

The DXPas34 repeat regulates random and imprinted X inactivation.

Developmental cell, Vol. 12, No. 1. (January 2007), pp. 57-71.

by D. E. Cohen, L. S. Davidow, J. A. Erwin, N. Xu, D. Warshawsky, J. T. Lee

posted to ctcf dxpas34 inactivation minisatellite repeat x-chromosome by sebastien_vigneau on 2008-05-21 15:30:39 as read

Evolution of beta satellite DNA sequences: evidence for duplication-mediated repeat amplification and spreading.

Molecular biology and evolution, Vol. 21, No. 9. (September 2004), pp. 1792-1799.

by M. F. Cardone, L. Ballarati, M. Ventura, et al.M. Rocchi, A. Marozzi, E. Ginelli, R. Meneveri

posted to beta-satellite centromere evolution repeat by sebastien_vigneau on 2008-04-24 22:03:30 as

Chromosome-specific DNA repeat probes.

The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society, Vol. 54, No. 12. (December 2006), pp. 1363-1370.

by A. Baumgartner, J. F. Weier, H. U. Weier

posted to alpha-satellite fish probe repeat by sebastien_vigneau on 2008-04-24 21:54:08 as read

Molecular Landscape of Modified Histones in Drosophila Heterochromatic Genes and Euchromatin-Heterochromatin Transition Zones.

PLoS Genet, Vol. 4, No. 1. (18 January 2008)

by Jiro C C. Yasuhara, Barbara T T. Wakimoto

posted to h3k9me2 heterochromatin repeat retrotransposon translocation by sebastien_vigneau on 2008-01-27 15:12:43 as

along with 2 people timflutre meiklej

Repeat-associated siRNAs cause chromatin silencing of retrotransposons in the Drosophila melanogaster germline.

Nucleic Acids Res (15 August 2007)

by Mikhail S S. Klenov, Sergey A A. Lavrov, Anastasia D D. Stolyarenko, et al.Sergey S S. Ryazansky, Alexei A A. Aravin, Thomas Tuschl, Vladimir A A. Gvozdev

posted to drosophila piwi rasirna repeat sirna by sebastien_vigneau on 2007-08-21 19:57:31 as

along with 1 person epigenetics

Chromosomal silencing and localization are mediated by different domains of Xist RNA

Nat Genet, Vol. 30, No. 2. (Feb 2002), pp. 167-74.

by Anton Wutz, Theodore P. Rasmussen, Rudolf Jaenisch

posted to inactivation repeat x-chromosome xist by sebastien_vigneau on 2007-07-11 14:15:29 as read

Inverted repeat structure of the human genome: the X-chromosome contains a preponderance of large, highly homologous inverted repeats that contain testes genes.

Genome Res, Vol. 14, No. 10A. (Oct 2004), pp. 1861-9.

by Peter E. Warburton, Joti Giordano, Fanny Cheung, Yefgeniy Gelfand, Gary Benson

posted to evolution inactivation repeat sex x-chromosome by sebastien_vigneau on 2007-07-11 14:15:29 as read

An essential role for the DXPas34 tandem repeat and Tsix transcription in the counting process of X chromosome inactivation

Proc Natl Acad Sci U S A, Vol. 103, No. 19. (May 2006), pp. 7390-5.

by Sebastien Vigneau, Sandrine Augui, Pablo Navarro, Philip Avner, Philippe Clerc

posted to dxpas34 inactivation minisatellite repeat tsix x-chromosome xist by sebastien_vigneau on 2007-07-11 14:15:29 as read

Methylation profiles of DXPas34 during the onset of X-inactivation

Hum Mol Genet, Vol. 10, No. 1. (Jan 2001), pp. 31-8.

by M. Prissette, El O. Maarri, D. Arnaud, J. Walter, P. Avner

posted to cpg dxpas34 inactivation methylation minisatellite repeat x-chromosome by sebastien_vigneau on 2007-07-11 14:09:14 as read

	DXZ4 chromatin adopts an opposing conformation to that of the surrounding chromosome and acquires a novel inactive X-specific role involving CTCF and antisense transcripts. [My Copy] Genome research, Vol. 18, No. 8. (August 2008), pp. 1259-1269. by Brian P. Chadwick posted to xci x-chromosome repeat methylation macrosatellite inactivation heterochromatin euchromatin dxz4 ctcf cpg-methylation cpg by sebastien_vigneau on 2009-08-18 16:27:27 as along with 2 groups X-chromosome inactivation CTCF
	Integration of the cytogenetic map with the draft human genome sequence. [My Copy] Human molecular genetics, Vol. 12, No. 9. (1 May 2003), pp. 1037-1044. by T. S. Furey, D. Haussler posted to cg cytogenetics g-banding gc line repeat sine by sebastien_vigneau on 2009-07-08 16:17:58 as along with 2 people and 2 groups polivares cisevol JLab BergmanLab
	CTCF-binding sites flank CTG/CAG repeats and form a methylation-sensitive insulator at the DM1 locus. [My Copy] Nature genetics, Vol. 28, No. 4. (August 2001), pp. 335-343. by G. N. Filippova, C. P. Thienes, B. H. Penn, et al.D. H. Cho, Y. J. Hu, J. M. Moore, T. R. Klesert, V. V. Lobanenkov, S. J. Tapscott posted to cag ctcf ctg dm1 repeat by sebastien_vigneau on 2009-06-23 00:45:16 as along with 1 group CTCF
	Intact recombineering of highly repetitive DNA requires reduced induction of recombination enzymes and improved host viability. [My Copy] Analytical biochemistry, Vol. 375, No. 2. (15 April 2008), pp. 394-396. by K. Narayanan posted to knock-out protocol recombination recombineering repeat technology by sebastien_vigneau on 2008-06-24 15:56:30 as
	The DXPas34 repeat regulates random and imprinted X inactivation. [My Copy] Developmental cell, Vol. 12, No. 1. (January 2007), pp. 57-71. by D. E. Cohen, L. S. Davidow, J. A. Erwin, N. Xu, D. Warshawsky, J. T. Lee posted to ctcf dxpas34 inactivation minisatellite repeat x-chromosome by sebastien_vigneau on 2008-05-21 15:30:39 as
	Evolution of beta satellite DNA sequences: evidence for duplication-mediated repeat amplification and spreading. [My Copy] Molecular biology and evolution, Vol. 21, No. 9. (September 2004), pp. 1792-1799. by M. F. Cardone, L. Ballarati, M. Ventura, et al.M. Rocchi, A. Marozzi, E. Ginelli, R. Meneveri posted to beta-satellite centromere evolution repeat by sebastien_vigneau on 2008-04-24 22:03:30 as
	Chromosome-specific DNA repeat probes. [My Copy] The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society, Vol. 54, No. 12. (December 2006), pp. 1363-1370. by A. Baumgartner, J. F. Weier, H. U. Weier posted to alpha-satellite fish probe repeat by sebastien_vigneau on 2008-04-24 21:54:08 as
	Molecular Landscape of Modified Histones in Drosophila Heterochromatic Genes and Euchromatin-Heterochromatin Transition Zones. [My Copy] PLoS Genet, Vol. 4, No. 1. (18 January 2008) by Jiro C C. Yasuhara, Barbara T T. Wakimoto posted to h3k9me2 heterochromatin repeat retrotransposon translocation by sebastien_vigneau on 2008-01-27 15:12:43 as along with 2 people timflutre meiklej
	Repeat-associated siRNAs cause chromatin silencing of retrotransposons in the Drosophila melanogaster germline. [My Copy] Nucleic Acids Res (15 August 2007) by Mikhail S S. Klenov, Sergey A A. Lavrov, Anastasia D D. Stolyarenko, et al.Sergey S S. Ryazansky, Alexei A A. Aravin, Thomas Tuschl, Vladimir A A. Gvozdev posted to drosophila piwi rasirna repeat sirna by sebastien_vigneau on 2007-08-21 19:57:31 as along with 1 person epigenetics
	Chromosomal silencing and localization are mediated by different domains of Xist RNA [My Copy] Nat Genet, Vol. 30, No. 2. (Feb 2002), pp. 167-74. by Anton Wutz, Theodore P. Rasmussen, Rudolf Jaenisch posted to inactivation repeat x-chromosome xist by sebastien_vigneau on 2007-07-11 14:15:29 as
	Inverted repeat structure of the human genome: the X-chromosome contains a preponderance of large, highly homologous inverted repeats that contain testes genes. [My Copy] Genome Res, Vol. 14, No. 10A. (Oct 2004), pp. 1861-9. by Peter E. Warburton, Joti Giordano, Fanny Cheung, Yefgeniy Gelfand, Gary Benson posted to evolution inactivation repeat sex x-chromosome by sebastien_vigneau on 2007-07-11 14:15:29 as
	An essential role for the DXPas34 tandem repeat and Tsix transcription in the counting process of X chromosome inactivation [My Copy] Proc Natl Acad Sci U S A, Vol. 103, No. 19. (May 2006), pp. 7390-5. by Sebastien Vigneau, Sandrine Augui, Pablo Navarro, Philip Avner, Philippe Clerc posted to dxpas34 inactivation minisatellite repeat tsix x-chromosome xist by sebastien_vigneau on 2007-07-11 14:15:29 as
	Methylation profiles of DXPas34 during the onset of X-inactivation [My Copy] Hum Mol Genet, Vol. 10, No. 1. (Jan 2001), pp. 31-8. by M. Prissette, El O. Maarri, D. Arnaud, J. Walter, P. Avner posted to cpg dxpas34 inactivation methylation minisatellite repeat x-chromosome by sebastien_vigneau on 2007-07-11 14:09:14 as

sebastien_vigneau's repeat [13 articles] Export

sebastien_vigneau's tags

x-chromosome	635
inactivation	591
ctcf	157
imprinting	105
evolution	85
methylation	78
xist	64
stemness	63
chromatin	59
h19	55
rna	52
transcription	50
mirna	47
nucleus	45
epigenetics	44
genome-wide	42
insulator	38
tsix	36
replication	36
igf2	35
germline	34
pcr	34
histone	34
network	32
technology	30
es	30
bioinformatics	30
heterochromatin	30
promoter	28
nucleolus	28
reprogramming	28
cancer	27
icr	27
brain	26
sirna	25
software	24
rnai	24
cpg	23
oocyte	23
meiosis	22
development	22
splicing	22
xci	22
enhancer	21
drosophila	20
nuclear-localization	20
review	19
sex	19
small-rna	19
polycomb	18
polii	18
esc	18
imprint	18
nuclear-organization	17
expression	17
snp	17
imaging	17
cohesin	17
oct4	17
marsupial	16
microarray	16
c-myc	15
yy1	15
recombination	15
sox2	15
brca1	15
antisense	15
localization	15
technique	15
dmr	14
transcription-factor	14
assymetry	14
pgc	14
chip-chip	14
nucleosome	14
disease	14
repeat	13
mrna	13
x-inactivation	13
nuclear-envelope	12
human	12
xic	12
early-mouse-embryo	12
mecp2	11
protocol	11
chip	11
regulator	11
centromere	11
pluripotency	11
real-time-pcr	11
x-chromosome-inactivation	10
klf4	10
nuclear-architecture	10
h3k27me3	10
polymorphism	10
loop	10
mir	10
acetylation	10
3d	10
embryo	10
dmd	10
exon	9
neuron	9
hox	9
kcnq1ot1	9
boris	9
chip-seq	9
nanog	9
dxpas34	9
oct	9
dnmt1	9
translation	9
fish	9
recombineering	9
gtl2	8
intron	8
rett	8
sequencing	8
choice	8
polymerase	8
dicer	8
sperm	8
euchromatin	8
mitosis	8
transposon	8
territory	8
kcnq1	8
chromosome	8
break	8
ncrna	8
microrna	8
binding-site	8
zinc-finger	7
genome	7
pericentric	7
dna-methylation	7
h3k4me3	7
microscopy	7
hp1	7
reactivation	7
eed	7
beta-globin	7
spermatogenesis	7
algorithm	7
piwi	7
cell-cycle	7
mutagenesis	7
nucleosome-positioning	7
mirtron	7
c-terminal	7
h3k9me2	7
differentiation	6
translocation	6
pirna	6
monoallelic	6
pcna	6
extra-embryonic	6
peg3	6
n-terminal	6
kshv	6
stain	6
h3k9	6
dsb	6
dna	6
knock-out	6
dlk1	6
monotreme	6
city	6
cre	6
chromatin-ip	6
y-chromosome	6
affymetrix	6
interaction	6
probe	6
oct34	6
parp	6
h3k4me2	6
preimplantation	5
nuclear-pore	5
suv39h	5
screen	5
efficiency	5
h3k36me3	5
h3	5
high-throughput	5
myc	5
argonaute	5
adp-ribose	5
blastocyst	5
regulation	5
cloning	5
trophoblast	5
compartment	5
ribosylation	5
p53	5
pairing	5
assay	5
ageing	5
gc	5
prc1	5
pcg	5
society	5
dosage	5
enhancer-blocking	5
binding	5
multiple-probe	5
genotyping	5
sociology	5
prc2	5
axis	4
virus	4
mutation	4
afm	4
3c	4
gene-repression	4
heatmap	4
nmd	4
caenorhabditis	4
communication	4
binding-motif	4
mbd	4
facultative-heterochromatin	4
qpcr	4
methylome	4
parp1	4
rest	4
model	4
platypus	4
gene	4
condensin	4
exosome	4
centrosome	4
msl	4
rasgrf1	4
repair	4
rett-syndrome	4
structure	4
phosphorylation	4
fgf	4
adp-ribosylation	4
nucleophosmin	4
database	4
xce	4
counting	4
ips	4
h3k9me	4
pseudogene	3
nuclear-transfer	3
arf	3
lna	3
sox	3
specificity	3
sumo	3
ring1b	3
zygote	3
snf2	3
barrier	3
tss	3
suz12	3
pausing	3
politics	3
behavior	3
xi	3
boundary	3
zp3	3
histone-code	3
clustering	3
retrotransposon	3
cluster	3
trans-splicing	3
atomic-force-microscopy	3
er	3
motif	3
xite	3
chromatin-barrier	3
word	3
pho	3
lamina	3
grb10	3
gaba	3
lacz	3
factory	3
herpesvirus	3
lineage	3
sex-determination	3
sense	3
epigenome	3
lysozyme	3
ciliates	3
lcr	3
lana	3
transcriptome	3
h3k27me	3
genome-browser	3
rdrp	3
lit1	3
noise	3
internet	3
escape	3
plutipotency	3
epiblast	3
hs	3
olfactory-receptor	3
music	3
icm	3
breast	3
tilling-array	3
tre	3
tumor	3
ctg	3
bibliography	3
dapi	3
h3k9me3	3
gene-activation	3
tcr	3
allele-specific-expression	3
constitutive-heterochromatin	3
minisatellite	3
sequence	3
enu	3
micro-rna	3
spermatocyte	3
map	3
rearrangement	3
competition	3
proliferation	3
hematopoiesis	3
psychology	3
fusion	3
embryonic-stem-cell	3
ribosome	3
spreading	3
allele-specific	3
gametogenesis	3
cdx2	3
memory	3
remodelling	3
aging	3
to-pro-3	3
line	3
cenp-a	3
h3k27	3
gnas	3
ezh2	3
ctcfl	3
zebrafish	3
sex-ratio	3
duplication	3
replication-origin	2
activator	2
nucleoporin	2
substitution	2
4c	2
h2ax	2
prc	2
erk	2
gene-body	2
quantitative	2
snrpn	2
bmp4	2
epidemiology	2
nep1	2
tf	2
learning	2
momme	2
hesc	2
encode	2
silencer	2
swisnf	2
morula	2
lamin	2
trithorax	2
orientation-dependent	2
centriole	2
protein	2
esrrb	2
architecture	2
bac	2
codon-bias	2
oogenesis	2
elongation	2
immunoglobulin	2
senescence	2
h2aub	2
loxp	2
cp190	2
igf	2
mar	2
data-mining	2
chromocenter	2
stress	2
lab-on-a-chip	2
ago	2
gamete	2
stat3	2
mommed1	2
endoderm	2
epimutation	2
akt	2
testis	2
ago1	2
stabilization	2
nucleocytoplasmic-transport	2
skewing	2
histone-deacetylase	2
trxg	2
fab-8	2
ig	2
hla-dqa1	2
therapy	2
mh2a	2
phylogeny	2
x-ray	2
repression	2
thyroid-hormone-response-element	2
inhibition	2
placenta	2
pleiohomeotic	2
cpg-methylation	2
ensembl	2
phenotype	2
real-time	2
air	2
nodal	2
pre	2
major-histocompatibilit-complex	2
meg3	2
history	2
tcfcp2l1	2
shadow-enhancer	2
dm1	2
hotspot	2
orientation-dependant	2
autosome	2
polya	2
thyroid-hormone	2
alignment	2
xl9	2
p300	2
trophectoderm	2
receptor	2
rad21	2
polyadenylation	2
pachytene	2
apoptosis	2
drosha	2
xenopus	2
ck2	2
gro-seq	2
t-cell	2
pattern	2
spermatid	2
division	2
locked-nucleic-acid	2
hiv	2
2-cell	2
plk	2
mbd2	2
sine	2
ink4a	2
orientation	2
kaiso	2
gene-expression	2
deletion	2
silencing	2
smc1	2
snorna	2
pic	2
cdkn1c	2
variegation	2
assembly	2
h1	2
smad1	2
how	2
primitive-endoderm	2
b-cell	2
biological-theme	2
reparation	2
h3k4me	2
screening	2
apbbeta	2
rt-pcr	2
zfp57	2
x	2
maize	2
par	2
p19arf	2
enx1	2
cmyc	2
retinoic-acid	2
stem-cell	2
degradation	2
b-lymphocyte	2
progenitor	2
protein-kinase	2
dosage-compensation	2
shrna	2
hla-drb1	2
cohesion	2
tip60	2