sficklin's library 21 articles Export

	Geometric interpretation of gene coexpression network analysis. [My Copy] PLoS computational biology, Vol. 4, No. 8. (15 August 2008), e1000117. by Steve Horvath, Jun Dong posted to no-tag by sficklin on 2009-10-03 19:32:14 as along with 22 people jeremymiller zufar dolchan isimpson rdiaz guhjy cswinburne jfr ptrobajo pengchy nolodie druvus aramesh2 kengg roys Ema tmmurali Borelli Totobox AbnerCYH davidchavalarias caseybrown
	Studying the Conditions for Learning Dynamic Bayesian Networks to Discover Genetic Regulatory Networks [My Copy] SIMULATION, Vol. 79, No. 12. (1 December 2003), pp. 689-702. by R. J. P. van Berlo, E. P. van Someren, M. J. T. Reinders posted to networks bayesian by sficklin on 2009-08-31 03:46:39 as
	Coexpression Analysis of Human Genes Across Many Microarray Data Sets [My Copy] Genome Research, Vol. 14, No. 6. (June 2004), pp. 1085-1094. by Homin K. Lee, Amy K. Hsu, Jon Sajdak, Jie Qin, Paul Pavlidis posted to co-expression by sficklin on 2009-08-26 02:43:30 as along with 17 people and 2 groups cabbagezs cswinburne pengchy jiny maryee gpalidwor giovanni jeremymiller hawkeyehammer grahamc macavity1g raylim sgoetz wilbur jo_davies nedwards dragonrez GeschwindLab Indigene
	Gene co-expression network topology provides a framework for molecular characterization of cellular state [My Copy] Bioinformatics, Vol. 20, No. 14. (22 September 2004), pp. 2242-2250. by Scott L. Carter, Christian M. Brechbuhler, Michael Griffin, Andrew T. Bond posted to no-tag by sficklin on 2009-08-24 22:41:32 as along with 2 people nolodie kengg
	A Gene-Coexpression Network for Global Discovery of Conserved Genetic Modules [My Copy] Science, Vol. 302, No. 5643. (10 October 2003), pp. 249-255. by Joshua M. Stuart, Eran Segal, Daphne Koller, Stuart K. Kim posted to gene co-expression by sficklin on 2009-08-24 22:10:09 as along with 24 people and 7 groups roys thegoose2 cswinburne carlk saket pengchy nolodie jeremymiller tharris dragonrez textoris lfriedl balajis nuke2005 maryee tardigrade opheliav wnpx neveaire macle raylim lp2 karfunkel vertikalist C. elegans / WormBase kdl Biostatistics Computational-Genomics Bioinformatics Neuroscience BTS-PT-AS-CS
	WormBase: a comprehensive data resource for Caenorhabditis biology and genomics [My Copy] Nucl. Acids Res., Vol. 33, No. suppl_1. (1 January 2005), pp. D383-389. by Nansheng Chen, Todd W. Harris, Igor Antoshechkin, et al.Carol Bastiani, Tamberlyn Bieri, Darin Blasiar, Keith Bradnam, Payan Canaran, Juancarlos Chan, Chao-Kung Chen, Wen J. Chen, Fiona Cunningham, Paul Davis, Eimear Kenny, Ranjana Kishore, Daniel Lawson, Raymond Lee, Hans-Michael Muller, Cecilia Nakamura, Shraddha Pai, Philip Ozersky, Andrei Petcherski, Anthony Rogers, Aniko Sabo, Erich M. Schwarz, Kimberly Van Auken, Qinghua Wang, Richard Durbin, John Spieth, Paul W. Sternberg, Lincoln D. Stein posted to no-tag by sficklin on 2009-08-06 15:35:48 as
	prot4EST: Translating Expressed Sequence Tags from neglected genomes [My Copy] BMC Bioinformatics, Vol. 5, No. 1. (2004), 187. by James Wasmuth, Mark Blaxter posted to no-tag by sficklin on 2009-08-03 19:15:45 as along with 2 people jameswasmuth GustavoLacerda
	Identifying bacterial genes and endosymbiont DNA with Glimmer [My Copy] Bioinformatics, Vol. 23, No. 6. (15 March 2007), pp. 673-679. by Arthur L. Delcher, Kirsten A. Bratke, Edwin C. Powers, Steven L. Salzberg posted to no-tag by sficklin on 2009-07-02 22:13:05 as along with 3 people druvus katholt wenhan
	Genome level analysis of rice mRNA 3'-end processing signals and alternative polyadenylation [My Copy] Nucl. Acids Res., Vol. 36, No. 9. (1 May 2008), pp. 3150-3161. by Yingjia Shen, Guoli Ji, Brian J. Haas, et al.Xiaohui Wu, Jianti Zheng, Greg J. Reese, Qingshun Q. Li posted to ests by sficklin on 2009-06-30 18:06:52 as
	An overview of the wcd EST clustering tool [My Copy] Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. 1542-1546. by Scott Hazelhurst, Winston Hide, Zsuzsanna Liptak, Ramon Nogueira, Richard Starfield posted to assembly ests by sficklin on 2009-06-29 17:33:32 as along with 5 people orzenil guhjy natstreet druvus jamselem
	EasyCluster: a fast and efficient gene-oriented clustering tool for large-scale transcriptome data [My Copy] BMC Bioinformatics, Vol. 10, No. Suppl 6. (2009), S10. by Ernesto Picardi, Flavio Mignone, Graziano Pesole posted to assembly ests by sficklin on 2009-06-29 17:30:48 as along with 1 person orzenil
	d2_cluster: A Validated Method for Clustering EST and Full-Length cDNA Sequences [My Copy] Genome Research, Vol. 9, No. 11. (1 November 1999), pp. 1135-1142. by John Burke, Dan Davison, Winston Hide posted to no-tag by sficklin on 2009-06-18 04:13:23 as along with 3 people nwpuzebra nmohelli urgi
	CMD: a Cotton Microsatellite Database resource for Gossypium genomics. [My Copy] BMC genomics, Vol. 7 (31 May 2006), 132. by A. Blenda, J. Scheffler, B. Scheffler, et al.M. Palmer, J. M. Lacape, J. Z. Yu, C. Jesudurai, S. Jung, S. Muthukumar, P. Yellambalase, S. Ficklin, M. Staton, R. Eshelman, M. Ulloa, S. Saha, B. Burr, S. Liu, T. Zhang, D. Fang, A. Pepper, S. Kumpatla, J. Jacobs, J. Tomkins, R. Cantrell, D. Main posted to no-tag by sficklin on 2009-06-05 07:28:33 as along with 2 people mestato GAbratti
	GDR (Genome Database for Rosaceae): integrated web resources for Rosaceae genomics and genetics research. [My Copy] BMC bioinformatics, Vol. 5, No. 1. (9 September 2004), 130. by S. Jung, C. Jesudurai, M. Staton, et al.Z. Du, S. Ficklin, I. Cho, A. Abbott, J. Tomkins, D. Main posted to no-tag by sficklin on 2009-06-05 07:24:54 as along with 1 person mestato
	A blackberry (Rubus L.) expressed sequence tag library for the development of simple sequence repeat markers [My Copy] BMC Plant Biology, Vol. 8, No. 1. (20 June 2008), 69. by Kim Lewers, Chris Saski, Brandon Cuthbertson, et al.David Henry, Meg Staton, Dorrie Main, Anik Dhanaraj, Lisa Rowland, Jeff Tomkins posted to no-tag by sficklin on 2009-06-05 07:22:12 as along with 2 people cugi mestato
	Automated FingerPrint Background removal: FPB [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 127. by Simone Scalabrin, Michele Morgante, Alberto Policriti posted to mapping physical by sficklin on 2009-05-01 04:33:55 as along with 1 person erexhepa
	BLAT--the BLAST-like alignment tool. [My Copy] Genome research, Vol. 12, No. 4. (1 April 2002), pp. 656-664. by W. James Kent posted to no-tag by sficklin on 2009-05-01 03:02:24 as along with 37 people and 3 groups azazello rshe dchughes rdowell gwallau druvus aprasad maria_hauser n00c Thaverkamp cpwardell daveGerrard coela daforerog pwais umit mmartin paszkows operon miguel pcahan1 Ayest indigoviolet mtagaya treangen michC djkt timflutre olympos cjeans wenhan natstreet antonkratz yoanjacquemin talponer bozdagd gpappas LabDros BergmanLab EisenLab
	Gene connectivity, function, and sequence conservation: predictions from modular yeast co-expression networks. [My Copy] BMC Genomics, Vol. 7 (2006) by M. R. Carlson, B. Zhang, Z. Fang, P. S. Mischel, S. Horvath, S. F. Nelson posted to co-expression by sficklin on 2009-04-30 03:48:43 as along with 5 people and 1 group natstreet druvus jeremymiller kengg xwbcn GeschwindLab
	WGCNA: an R package for weighted correlation network analysis. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (2008) by Peter Langfelder, Steve Horvath posted to co-expression by sficklin on 2009-04-30 03:46:57 as along with 15 people and 2 groups jeremymiller daforerog lwaldron jfr ekotelnikova slv23 rdiaz guhjy natstreet druvus cswinburne lptolik jmeppley irinamohorianu pengchy Bioinformatics Bioinformatics - CRUK
	Integrated weighted gene co-expression network analysis with an application to chronic fatigue syndrome. [My Copy] BMC systems biology, Vol. 2 (06 November 2008), 95. by Angela P. Presson, Eric M. Sobel, Jeanette C. Papp, et al.Charlyn J. Suarez, Toni Whistler, Mangalathu S. Rajeevan, Suzanne D. Vernon, Steve Horvath posted to co-expression by sficklin on 2009-04-30 03:43:42 as along with 4 people shikin natstreet druvus timrwatkins
	Complete genome of the uncultured Termite Group 1 bacteria in a single host protist cell [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 14. (8 April 2008), pp. 5555-5560. by Yuichi Hongoh, Vineet K. Sharma, Tulika Prakash, et al.Satoko Noda, Todd D. Taylor, Toshiaki Kudo, Yoshiyuki Sakaki, Atsushi Toyoda, Masahira Hattori, Moriya Ohkuma posted to assembly bacterial by sficklin on 2009-03-11 03:46:49 as along with 3 people and 2 groups vaulot Pascalichouchou skato_toyaku Microbial-Ecology Papers recommended by the Roscoff Plankton Group