Register | Log in | FAQ      [?] 
Recent | Unread | Search | Authors | Tags | Export

shadowman's library [40 articles]

Recent papers added to shadowman's library.
  • Geometrical parameters extraction from discrete paths
    (1996), pp. 24-35.
    by Anne Vialard
    posted to discrete_curvature by shadowman on 2008-02-14 04:20:46 as **
  • SS3D-P2: a three-dimensional substructure search program for protein motifs based on secondary structure elements
    Comput. Appl. Biosci., Vol. 13, No. 6. (1 December 1997), pp. 593-600.
    by Hiroaki Kato, Yoshimasa Takahashi
    posted to motif structural_biology by shadowman on 2007-12-20 19:15:08 as **
  • Characterizing the microenvironment surrounding protein sites
    Protein Sci, Vol. 4, No. 4. (1 April 1995), pp. 622-635.
    by SC Bagley, RB Altman
    posted to motif structural_biology by shadowman on 2007-12-19 03:33:21 as ** along with 1 person xwang14
  • Recognizing complex, asymmetric functional sites in protein structures using a Bayesian scoring function.
    J Bioinform Comput Biol, Vol. 1, No. 1. (April 2003), pp. 119-138.
    by L Wei, RB Altman
    posted to motif structural_biology by shadowman on 2007-12-19 03:29:46 as **
  • Bayesian probabilistic approach for predicting backbone structures in terms of protein blocks
    Proteins: Structure, Function, and Genetics, Vol. 41, No. 3. (2000), pp. 271-287.
    by AG de Brevern, C Etchebest, S Hazout
    posted to motif structural_biology by shadowman on 2007-12-17 20:51:26 as **
  • A Graph-theoretic Approach to the Identification of Three-dimensional Patterns of Amino Acid Side-chains in Protein Structures
    Journal of Molecular Biology, Vol. 243, No. 2. (20 October 1994), pp. 327-344.
    by Peter J Artymiuk, Andrew R Poirrette, Helen M Grindley, David W Rice, Peter Willett
    posted to motif structural_biology by shadowman on 2007-12-17 18:27:08 as **
  • Three-dimensional, sequence order-independent structural comparison of a serine protease against the crystallographic database reveals active site similarities: potential implications to evolution and to protein folding.
    Protein Sci, Vol. 3, No. 5. (May 1994), pp. 769-778.
    by D Fischer, H Wolfson, SL Lin, R Nussinov
    posted to geometric_hashing structural_biology by shadowman on 2007-12-17 16:44:24 as ** along with 4 people and 2 groups barry aalibes tjimenez chrys structural_bioinformatics Bioinformatics
  • Detection of protein three-dimensional side-chain patterns: new examples of convergent evolution
    Journal of Molecular Biology, Vol. 279, No. 5. (26 June 1998), pp. 1211-1227.
    by Robert B Russell
    posted to motif structural_biology by shadowman on 2007-12-16 19:05:05 as ** along with 2 people jwm Evangelia
  • Recognition of spatial motifs in protein structures.
    J Mol Biol, Vol. 285, No. 4. (29 January 1999), pp. 1887-1897.
    by GJ Kleywegt
    posted to motif structural_biology by shadowman on 2007-12-16 18:52:20 as ** along with 2 people nickolay martainn
  • Recognizing protein binding sites using statistical descriptions of their 3D environments
    Pacific Symposium: Biocomputing (1998), pp. 497-508.
    by L Wei, RB Altman
    posted to feature motif structural_biology by shadowman on 2007-12-10 01:17:48 as ** along with 1 person and 1 group sobolevnrm baker-group
  • An Approach to Three-Dimensional Motif Finding in Proteins
    by Hiroaki Kato, Yoshimasa Takahashi
    posted to distance_matrix motif structural_biology by shadowman on 2007-12-10 01:12:35 as **
  • Characterizing oriented protein structural sites using biochemical properties
    (1995)
    by S Bagley, L Wei, C Cheng, R Altman
    posted to feature motif structural_biology by shadowman on 2007-12-09 20:29:20 as **
  • TESS: a geometric hashing algorithm for deriving 3D coordinate templates for searching structural databases. Application to enzyme active sites.
    Protein Sci, Vol. 6, No. 11. (November 1997), pp. 2308-2323.
    by AC Wallace, N Borkakoti, JM Thornton
    posted to geometric_hashing motif structural_biology by shadowman on 2007-12-07 21:52:42 as read along with 3 people tjimenez jwm nickolay
  • A geometric algorithm to find small but highly similar 3D substructures in proteins
    Bioinformatics, Vol. 14, No. 6. (1 July 1998), pp. 516-522.
    by X Pennec, N Ayache
    posted to geometric_hashing motif structural_biology by shadowman on 2007-12-07 21:51:53 as read
  • Clustering protein environments for function prediction: finding PROSITE motifs in 3D.
    BMC Bioinformatics, Vol. 8 Suppl 4 (2007)
    by S Yoon, JC Ebert, EY Chung, G De Micheli, RB Altman
    posted to clustering feature motif structural_biology by shadowman on 2007-11-30 03:19:18 as ** along with 1 person and 1 group Einat structural_bioinformatics
  • Automatic generation of 3D motifs for classification of protein binding sites
    BMC Bioinformatics, Vol. 8 (30 August 2007), 321.
    by Jean-Christophe Nebel, Pawel Herzyk, David R Gilbert
    posted to clustering motif structural_biology by shadowman on 2007-11-30 02:52:07 as ** along with 3 people carlescorbi Evangelia Minty
  • Discovering structural motifs using a structural alphabet: Application to magnesium-binding sites
    BMC Bioinformatics, Vol. 8 (28 March 2007), 106.
    by Minko Dudev, Carmay Lim
    posted to frequency_analysis motif structural_biology by shadowman on 2007-11-30 02:33:05 as **
  • Efficient detection of three-dimensional structural motifs in biological macromolecules by computer vision techniques.
    Proceedings of the National Academy of Sciences of the USA, Vol. 88, No. 23. (1 December 1991), pp. 10495-10499.
    by R Nussinov, HJ Wolfson
    posted to geometric_hashing motif structural_biology by shadowman on 2007-11-30 02:11:26 as **
  • Automated construction of structural motifs for predicting functional sites on protein structures.
    Pac Symp Biocomput (2003), pp. 204-215.
    by MP Liang, DL Brutlag, RB Altman
    posted to feature motif structural_biology by shadowman on 2007-11-26 18:22:50 as ***** along with 1 person Ema
  • FoldMiner: structural motif discovery using an improved superposition algorithm.
    Protein Sci, Vol. 13, No. 1. (January 2004), pp. 278-294.
    by J Shapiro, D Brutlag
    posted to geometric_hashing motif structural_biology by shadowman on 2007-11-26 18:19:51 as *****
  • An algorithm for constraint-based structural template matching: application to 3D templates with statistical analysis.
    Bioinformatics, Vol. 19, No. 13. (1 September 2003), pp. 1644-1649.
    by JA Barker, JM Thornton
    posted to geometric_hashing motif structural_biology by shadowman on 2007-11-26 17:51:10 as ** along with 6 people and 2 groups tjimenez jwm gbart tny siebertm chgjb Radiation_Damage Stressosome
  • Protein function prediction using local 3D templates.
    J Mol Biol (11 July 2005)
    by RA Laskowski, JD Watson, JM Thornton
    posted to function_from_structure motif structural_biology by shadowman on 2007-11-26 17:04:14 as ** along with 7 people jwm mdimmic chrn gbart MaggieYe siebertm yoonk
  • notes Analysis of domain motions in large proteins
    Proteins: Structure, Function, and Genetics, Vol. 34, No. 3., pp. 369-382.
    by Konrad Hinsen, Aline Thomas, Martin J Field
    posted to domain motif structural_biology by shadowman on 2007-11-26 16:53:33 as *** along with 2 people and 3 groups barry yongzhao structural_bioinformatics Bioinformatics TSRI_MGL
  • notes Analysis of domain motions by approximate normal mode calculations
    Proteins: Structure, Function, and Genetics, Vol. 33, No. 3. (9 March 1999), pp. 417-429.
    by Konrad Hinsen
    posted to domain motif structural_biology by shadowman on 2007-11-26 16:50:16 as *** along with 4 people and 3 groups BragilMassoud barry aqeel yongzhao structural_bioinformatics Bioinformatics TSRI_MGL
  • notes MobiREAL Simulator Evaluating MANET Applications in Real Environments
    (2005), pp. 499-502.
    by Kazuki Konishi, Kumiko Maeda, Kazuki Sato, Akiko Yamasaki, Hirozumi Yamaguchi, Teruo Higashino, Keiichi Yasumoto
    posted to manet master mobility simulation by shadowman on 2006-05-14 22:27:00 as read
  • notes Trace-based mobile network emulation
    SIGCOMM Comput. Commun. Rev., Vol. 27, No. 4. (October 1997), pp. 51-61.
    by Brian D Noble, M Satyanarayanan, Giao T Nguyen, Randy H Katz
    posted to manet master testbed by shadowman on 2006-05-14 22:05:11 as read
  • notes Smooth is better than sharp: a random mobility model for simulation of wireless networks
    (2001), pp. 19-27.
    by Christian Bettstetter
    posted to manet master mobility simulation by shadowman on 2006-05-14 21:58:20 as read
  • notes Towards realistic mobility models for mobile ad hoc networks
    (2003), pp. 217-229.
    by Amit Jardosh, Elizabeth M Belding-Royer, Kevin C Almeroth, Subhash Suri
    posted to manet master mobility simulation by shadowman on 2006-05-14 18:25:35 as read along with 7 people and 3 groups eldaly jlee stransky powell jblebrun theus s-fujii Georouting OpportunisticNetworking Bluespots
  • A dynamic network scenario emulation tool
    Computer Communications and Networks, 2002. Proceedings. Eleventh International Conference on (2002), pp. 262-267.
    by D Herrscher, K Rothermel
    posted to manet master testbed by shadowman on 2006-05-14 00:18:06 as read
  • Overview of the ORBIT radio grid testbed for evaluation of next-generation wireless network protocols
    Wireless Communications and Networking Conference, 2005 IEEE, Vol. 3 (2005), pp. 1664-1669 Vol. 3.
    by D Raychaudhuri, I Seskar, M Ott, S Ganu, K Ramachandran, H Kremo, R Siracusa, H Liu, M Singh
    posted to manet master testbed by shadowman on 2006-05-14 00:10:08 as read along with 1 person Grauel
  • Testbed on a desktop: strategies and techniques to support multi-hop MANET routing protocol development
    (2001), pp. 164-172.
    by James T Kaba, Douglas R Raichle
    posted to manet master testbed by shadowman on 2006-05-14 00:03:33 as read along with 1 person and 1 group alcober Subgrup4
  • A Java-Based Uniform Workbench for Simulating and Executing Distributed Mobile Applications
    Lecture Notes in Computer Science, Vol. 2952 (27 November 2003), pp. 116-127.
    by Hannes Frey, Daniel Görgen, Johannes K Lehnert, Peter Sturm
    posted to manet master testbed by shadowman on 2006-05-13 19:58:56 as read
  • EWANT: the emulated wireless ad hoc network testbed
    Wireless Communications and Networking, Vol. 3 (16 March 2003), pp. 1844-1849.
    by S Sanghani, TX Brown, S Bhandare, S Doshi
    posted to manet master testbed by shadowman on 2006-05-13 19:51:15 as read
  • A survey of mobility models for ad hoc network research
    Wireless Communications and Mobile Computing, Vol. 2, No. 5. (11 September 2002), pp. 483-502.
    by Tracy Camp, Jeff Boleng, Vanessa Davies
    posted to manet master mobility simulation by shadowman on 2006-05-13 18:29:32 as read
  • On the accuracy of MANET simulators
    (2002), pp. 38-43.
    by David Cavin, Yoav Sasson, Andr&\#233; Schiper
    posted to accuracy manet master simulation by shadowman on 2006-05-13 17:55:09 as read along with 2 people and 1 group alcober chiayung Subgrup4
  • notes An integrated environment for testing mobile ad-hoc networks
    (2002), pp. 104-111.
    by Yongguang Zhang, Wei Li
    posted to manet master testbed by shadowman on 2006-05-13 17:38:39 as read along with 3 people and 1 group PitaGyros alcober wtribbey Subgrup4
  • Fast multiresolution image querying
    (1995), pp. 277-286.
    by Charles E Jacobs, Adam Finkelstein, David H Salesin
    posted to image retrieval wavelet by shadowman on 2005-05-03 17:21:22 as **
  • Region-Based Image Querying
    (1997)
    by Chad Carson, Serge Belongie, Hayit Greenspan, Jitendra Malik
    posted to blob image querying by shadowman on 2005-05-01 04:28:38 as ** along with 1 person gyuli
  • Fast Wavelet Histogram Techniques for Image Indexing
    Computer Vision and Image Understanding, Vol. 75, No. 1-2. (July 1999), pp. 99-110.
    by M Mandal, T Aboulnasr, S Panchanathan
    posted to histogram image wavelet by shadowman on 2005-05-01 04:04:17 as **
  • Cortina: a system for large-scale, content-based web image retrieval
    (2004), pp. 508-511.
    by Till Quack, Ullrich M&\#246;nich, Lars Thiele, BS Manjunath
    posted to association image retrieval by shadowman on 2005-05-01 03:18:58 as *** along with 2 people tq davidmihalcik
    • Note: You may cite this page as: http://www.citeulike.org/user/shadowman

    RIS BibTeX RSS
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.