sharpton's library 61 articles Export

	Bacterial Community Variation in Human Body Habitats Across Space and Time [My Copy] Science (5 November 2009), 1177486. by Elizabeth K. Costello, Christian L. Lauber, Micah Hamady, Noah Fierer, Jeffrey I. Gordon, Rob Knight posted to temporal_variability microflora microbiota microbiome human community_composition community_assembly biogeography bacterial_communities by sharpton on 2009-11-06 16:32:29 as along with 3 people and 1 group kostanik74 djkt skembel iSEEM
	Nonlinear Dynamics of Nonsynonymous (dN) and Synonymous (dS) Substitution Rates Affects Inference of Selection [My Copy] Genome Biol Evol, Vol. 2009, No. 0. (4 September 2009), pp. 308-319. by Jochen B. W. Wolf, Axel Kunstner, Kiwoong Nam, Mattias Jakobsson, Hans Ellegren posted to variation selection positive genomics comparative by sharpton on 2009-09-14 18:27:10 as along with 5 people and 3 groups avilella operon stajich gwallau gjuggler Ensembl Compara citations Mycology iSEEM
	SIZE-CORRECTION AND PRINCIPAL COMPONENTS FOR INTERSPECIFIC COMPARATIVE STUDIES [My Copy] Evolution, Vol. 9999, No. 9999. (2009) by Liam J. Revell posted to statistics species_data species phylogenetic by sharpton on 2009-09-14 18:24:49 as along with 1 group iSEEM
	Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models [My Copy] Nature Methods, Vol. 6, No. 9. (02 August 2009), pp. 673-676. by Arthur Brady, Steven L. Salzberg posted to otu metagenomics imm classification binning by sharpton on 2009-08-25 22:59:51 as along with 7 people and 4 groups azazello robertrentzsch dakelley skembel Thaverkamp jbhiatt stajich Orengo Group Journal Picks iSEEM Journal picks Mycology
	Redefining chronic viral infection. [My Copy] Cell, Vol. 138, No. 1. (10 July 2009), pp. 30-50. by Herbert W. Virgin, E. John Wherry, Rafi Ahmed posted to virus virome microbiome metagenome human by sharpton on 2009-08-24 17:01:49 as along with 2 people and 1 group vplagnol rpsimmonsin iSEEM
	Temporal variation of Synechococcus clades at a coastal Pacific Ocean monitoring site [My Copy] ISME J, Vol. 3, No. 8. (9 April 2009), pp. 903-915. by Vera Tai, Brian Palenik posted to clades marine microbiology population temoporal by sharpton on 2009-08-06 22:54:40 as along with 1 group iSEEM
	Horizontal gene transfer of an entire metabolic pathway between a eukaryotic alga and its DNA virus [My Copy] Genome Research, Vol. 19, No. 8. (August 2009), pp. 1441-1449. by Adam Monier, António Pagarete, Colomban de Vargas, et al.Michael J. Allen, Betsy Read, Jean-Michel Claverie, Hiroyuki Ogata posted to algea evolution hgt marine ocean virus by sharpton on 2009-08-06 21:58:50 as along with 1 person and 2 groups gwallau LabDros iSEEM
	Phylogenetic Approaches for Describing and Comparing the Diversity of Microbial Communities [My Copy] Appl. Environ. Microbiol., Vol. 68, No. 8. (1 August 2002), pp. 3673-3682. by Andrew P. Martin posted to community diversity ecology fst genetics phylogenetics structure by sharpton on 2009-07-28 02:38:18 as along with 8 people and 2 groups hwright skembel sriesenfeld jmeppley Thaverkamp mcox Olaf_Ilzins djkt Microbial-Ecology iSEEM
	$My PDF lozupone_05_unifrac.pdf$ UniFrac: a New Phylogenetic Method for Comparing Microbial Communities [My Copy] Appl. Environ. Microbiol., Vol. 71, No. 12. (1 December 2005), pp. 8228-8235. by Catherine Lozupone, Rob Knight posted to diversity method phylogenetic unifrac by sharpton on 2009-07-25 00:03:48 as along with 5 people and 1 group esyoun mlangill sameersoi jdelcampo sconlan Microbial-Ecology
	Fifteen years of microbial genomics: meeting the challenges and fulfilling the dream [My Copy] Nat Biotech, Vol. 27, No. 7. (July 2009), pp. 627-632. by Nikos C. Kyrpides posted to genomics microbial reivew by sharpton on 2009-07-24 17:47:18 as along with 3 people and 1 group seanyuan michaelbarton neils BergmanLab
	Global patterns of speciation and diversity [My Copy] Nature, Vol. 460, No. 7253. (16 July 2009), pp. 384-387. by M. A. M. de Aguiar, M. Baranger, E. M. Baptestini, L. Kaufman, Y. Bar-Yam posted to concept diversity model neutral species by sharpton on 2009-07-24 17:46:42 as along with 6 people and 1 group operon kinestetika jago melo_mcr dinnes djkt iSEEM
	Unravelling ancient microbial history with community proteogenomics and lipid geochemistry [My Copy] Nat Rev Micro, Vol. 7, No. 8. (August 2009), pp. 601-609. by Jochen J. Brocks, Jillian Banfield posted to biomarkers community genomics geochemistry history metabolic metagenomics microbial pathways by sharpton on 2009-07-24 17:45:38 as along with 1 person and 1 group kinestetika iSEEM
	Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. [My Copy] Nature, Vol. 447, No. 7146. (14 June 2007), pp. 799-816. by ENCODE Project Consortium, Ewan Birney, John A. Stamatoyannopoulos, et al.Anindya Dutta, Roderic Guigó, Thomas R. Gingeras, Elliott H. Margulies, Zhiping Weng, Michael Snyder, Emmanouil T. Dermitzakis, Robert E. Thurman, Michael S. Kuehn, Christopher M. Taylor, Shane Neph, Christoph M. Koch, Saurabh Asthana, Ankit Malhotra, Ivan Adzhubei, Jason A. Greenbaum, Robert M. Andrews, Paul Flicek, Patrick J. Boyle, Hua Cao, Nigel P. Carter, Gayle K. Clelland, Sean Davis, Nathan Day, Pawandeep Dhami, Shane C. Dillon, Michael O. Dorschner, Heike Fiegler, Paul G. Giresi, Jeff Goldy, Michael Hawrylycz, Andrew Haydock, Richard Humbert, Keith D. James, Brett E. Johnson, Ericka M. Johnson, Tristan T. Frum, Elizabeth R. Rosenzweig, Neerja Karnani, Kirsten Lee, Gregory C. Lefebvre, Patrick A. Navas, Fidencio Neri, Stephen C. Parker, Peter J. Sabo, Richard Sandstrom, Anthony Shafer, David Vetrie, Molly Weaver, Sarah Wilcox, Man Yu, Francis S. Collins, Job Dekker, Jason D. Lieb, Thomas D. Tullius, Gregory E. Crawford, Shamil Sunyaev, William S. Noble, Ian Dunham, France Denoeud, Alexandre Reymond, Philipp Kapranov, Joel Rozowsky, Deyou Zheng, Robert Castelo, Adam Frankish, Jennifer Harrow, Srinka Ghosh, Albin Sandelin, Ivo L. Hofacker, Robert Baertsch, Damian Keefe, Sujit Dike, Jill Cheng, Heather A. Hirsch, Edward A. Sekinger, Julien Lagarde, Josep F. Abril, Atif Shahab, Christoph Flamm, Claudia Fried, Jörg Hackermüller, Jana Hertel, Manja Lindemeyer, Kristin Missal, Andrea Tanzer, Stefan Washietl, Jan Korbel, Olof Emanuelsson, Jakob S. Pedersen, Nancy Holroyd, Ruth Taylor, David Swarbreck, Nicholas Matthews, Mark C. Dickson, Daryl J. Thomas, Matthew T. Weirauch, James Gilbert, Jorg Drenkow, Ian Bell, XiaoDong Zhao, K. G. Srinivasan, Wing-Kin K. Sung, Hong Sain S. Ooi, Kuo Ping P. Chiu, Sylvain Foissac, Tyler Alioto, Michael Brent, Lior Pachter, Michael L. Tress, Alfonso Valencia, Siew Woh W. Choo, Chiou Yu Y. Choo, Catherine Ucla, Caroline Manzano, Carine Wyss, Evelyn Cheung, Taane G. Clark, James B. Brown, Madhavan Ganesh, Sandeep Patel, Hari Tammana, Jacqueline Chrast, Charlotte N. Henrichsen, Chikatoshi Kai, Jun Kawai, Ugrappa Nagalakshmi, Jiaqian Wu, Zheng Lian, Jin Lian, Peter Newburger, Xueqing Zhang, Peter Bickel, John S. Mattick, Piero Carninci, Yoshihide Hayashizaki, Sherman Weissman, Tim Hubbard, Richard M. Myers, Jane Rogers, Peter F. Stadler, Todd M. Lowe, Chia-Lin L. Wei, Yijun Ruan, Kevin Struhl, Mark Gerstein, Stylianos E. Antonarakis, Yutao Fu, Eric D. Green, Ulaş Karaöz, Adam Siepel, James Taylor, Laura A. Liefer, Kris A. Wetterstrand, Peter J. Good, Elise A. Feingold, Mark S. Guyer, Gregory M. Cooper, George Asimenos, Colin N. Dewey, Minmei Hou, Sergey Nikolaev, Juan I. Montoya-Burgos, Ari Löytynoja, Simon Whelan, Fabio Pardi, Tim Massingham, Haiyan Huang, Nancy R. Zhang, Ian Holmes, James C. Mullikin, Abel Ureta-Vidal, Benedict Paten, Michael Seringhaus, Deanna Church, Kate Rosenbloom, W. James Kent, Eric A. Stone, NISC Comparative Sequencing Program, Baylor College of Medicine Human Genome Sequencing Center, Washington University Genome Sequencing Center, Broad Institute, Children's Hospital Oakland Research Institute, Serafim Batzoglou, Nick Goldman, Ross C. Hardison, David Haussler, Webb Miller, Arend Sidow, Nathan D. Trinklein, Zhengdong D. Zhang, Leah Barrera, Rhona Stuart, David C. King, Adam Ameur, Stefan Enroth, Mark C. Bieda, Jonghwan Kim, Akshay A. Bhinge, Nan Jiang, Jun Liu, Fei Yao, Vinsensius B. Vega, Charlie W. Lee, Patrick Ng, Atif Shahab, Annie Yang, Zarmik Moqtaderi, Zhou Zhu, Xiaoqin Xu, Sharon Squazzo, Matthew J. Oberley, David Inman, Michael A. Singer, Todd A. Richmond, Kyle J. Munn, Alvaro Rada-Iglesias, Ola Wallerman, Jan Komorowski, Joanna C. Fowler, Phillippe Couttet, Alexander W. Bruce, Oliver M. Dovey, Peter D. Ellis, Cordelia F. Langford, David A. Nix, Ghia Euskirchen, Stephen Hartman, Alexander E. Urban, Peter Kraus, Sara Van Calcar, Nate Heintzman, Tae Hoon H. Kim, Kun Wang, Chunxu Qu, Gary Hon, Rosa Luna, Christopher K. Glass, M. Geoff Rosenfeld, Shelley Force F. Aldred, Sara J. Cooper, Anason Halees, Jane M. Lin, Hennady P. Shulha, Xiaoling Zhang, Mousheng Xu, Jaafar N. Haidar, Yong Yu, Yijun Ruan, Vishwanath R. Iyer, Roland D. Green, Claes Wadelius, Peggy J. Farnham, Bing Ren, Rachel A. Harte, Angie S. Hinrichs, Heather Trumbower, Hiram Clawson, Jennifer Hillman-Jackson, Ann S. Zweig, Kayla Smith, Archana Thakkapallayil, Galt Barber, Robert M. Kuhn, Donna Karolchik, Lluis Armengol, Christine P. Bird, Paul I. de Bakker, Andrew D. Kern, Nuria Lopez-Bigas, Joel D. Martin, Barbara E. Stranger, Abigail Woodroffe, Eugene Davydov, Antigone Dimas, Eduardo Eyras, Ingileif B. Hallgrímsdóttir, Julian Huppert, Michael C. Zody, Gonçalo R. Abecasis, Xavier Estivill, Gerard G. Bouffard, Xiaobin Guan, Nancy F. Hansen, Jacquelyn R. Idol, Valerie V. Maduro, Baishali Maskeri, Jennifer C. McDowell, Morgan Park, Pamela J. Thomas, Alice C. Young, Robert W. Blakesley, Donna M. Muzny, Erica Sodergren, David A. Wheeler, Kim C. Worley, Huaiyang Jiang, George M. Weinstock, Richard A. Gibbs, Tina Graves, Robert Fulton, Elaine R. Mardis, Richard K. Wilson, Michele Clamp, James Cuff, Sante Gnerre, David B. Jaffe, Jean L. Chang, Kerstin Lindblad-Toh, Eric S. Lander, Maxim Koriabine, Mikhail Nefedov, Kazutoyo Osoegawa, Yuko Yoshinaga, Baoli Zhu, Pieter J. de Jong posted to encode genome human transcription by sharpton on 2009-07-24 17:44:02 as along with 25 people and 2 groups bartjacobse daveGerrard daforerog isimpson jessopher timhubbard scjparker polivares coela ilyashl aprasad myrtilus daed waszak guhjy jfr chad_davis kengg olympos blobbybirdman shikin fpattyn yevishere elfar eskay Bioinformatics UH - Computational Biology
	Quantifying environmental adaptation of metabolic pathways in metagenomics [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 5. (3 February 2009), pp. 1374-1379. by Tara A. Gianoulis, Jeroen Raes, Prianka V. Patel, et al.Robert Bjornson, Jan O. Korbel, Ivica Letunic, Takuji Yamada, Alberto Paccanaro, Lars J. Jensen, Michael Snyder, Peer Bork, Mark B. Gerstein posted to environmental metabolites metagenomics pathway by sharpton on 2009-07-24 17:42:37 as along with 16 people and 2 groups paccanarolab vvoorr djkt jjray roys Lizzy_fun skembel jlgreen Thaverkamp dbensasson anphony michaelbarton idoerg trfield larsjuhljensen jmeppley Paccanaro Lab iSEEM
	Functional Classification Using Phylogenomic Inference [My Copy] PLoS Comput Biol, Vol. 2, No. 6. (30 June 2006), e77. by Duncan Brown, Kimmen Sjölander posted to phylogenetics phylogenomics by sharpton on 2009-07-24 17:41:50 as along with 5 people and 2 groups sgoetz druvus giovenko marcius jhc BioinfoCIPF SGU-CIPF
	The infinite sites model of genome evolution [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 38. (23 September 2008), pp. 14254-14261. by Jian Ma, Aakrosh Ratan, Brian J. Raney, Bernard B. Suh, Webb Miller, David Haussler posted to genetics genomics infinite model population sites by sharpton on 2009-07-24 17:41:18 as along with 8 people and 1 group Thaverkamp AaronDarling ilyashl druvus operon inesdesantiago stajich stringertheory Mycology
	SOrt-ITEMS: Sequence orthology based approach for improved taxonomic estimation of metagenomic sequences [My Copy] Bioinformatics, Vol. 25, No. 14. (15 July 2009), pp. 1722-1730. by M. Monzoorul Haque, Tarini S. Ghosh, Dinakar Komanduri, Sharmila S. Mande posted to binning metagenomics orthology taxonomy by sharpton on 2009-07-16 21:31:38 as along with 5 people and 1 group dakelley sriesenfeld djkt guhjy operon iSEEM
	The origins of apicomplexan sequence innovation [My Copy] Genome Research, Vol. 19, No. 7. (10 July 2009), pp. 1202-1213. by James Wasmuth, Jennifer Daub, José M. Peregrín-Alvarez, Constance A. M. Finney, John Parkinson posted to apicomplexan comparative diversity genomics innovation protein by sharpton on 2009-07-16 00:03:14 as along with 2 people and 2 groups ppgardne stajich Journal picks Mycology
	The convergence of carbohydrate active gene repertoires in human gut microbes [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 39. (30 September 2008), pp. 15076-15081. by Catherine A. Lozupone, Micah Hamady, Brandi L. Cantarel, et al.Pedro M. Coutinho, Bernard Henrissat, Jeffrey I. Gordon, Rob Knight posted to convergence function gut metagenomics microbiome novelty by sharpton on 2009-07-14 22:20:03 as along with 5 people and 1 group cmzmasek Thaverkamp djkt skembel sg45653 iSEEM
	Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: Implications for the microbial “pan-genome” [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 39. (27 September 2005), pp. 13950-13955. by Hervé Tettelin, Vega Masignani, Michael J. Cieslewicz, et al.Claudio Donati, Duccio Medini, Naomi L. Ward, Samuel V. Angiuoli, Jonathan Crabtree, Amanda L. Jones, A. Scott Durkin, Robert T. DeBoy, Tanja M. Davidsen, Marirosa Mora, Maria Scarselli, Margarit, Jeremy D. Peterson, Christopher R. Hauser, Jaideep P. Sundaram, William C. Nelson, Ramana Madupu, Lauren M. Brinkac, Robert J. Dodson, Mary J. Rosovitz, Steven A. Sullivan, Sean C. Daugherty, Daniel H. Haft, Jeremy Selengut, Michelle L. Gwinn, Liwei Zhou, Nikhat Zafar, Hoda Khouri, Diana Radune, George Dimitrov, Kisha Watkins, Kevin J. B. O'Connor, Shannon Smith, Teresa R. Utterback, Owen White, Craig E. Rubens, Guido Grandi, Lawrence C. Madoff, Dennis L. Kasper, John L. Telford, Michael R. Wessels, Rino Rappuoli, Claire M. Fraser posted to comparative core genome genomics hgt pangenome population prokaryotes by sharpton on 2009-07-14 20:00:07 as along with 4 people and 1 group nyyu azazello druvus AaronDarling iSEEM
	Pervasive, genome-wide positive selection leading to functional divergence in the bacterial genus Campylobacter [My Copy] Genome Research, Vol. 19, No. 7. (July 2009), pp. 1224-1232. by Tristan Lefébure, Michael J. Stanhope posted to analysis bacteria comparative genome genomics positive scan selection by sharpton on 2009-07-06 15:19:11 as
	Increasing the coverage of a metapopulation consensus genome by iterative read mapping and assembly [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2878-2881. by Bas E. Dutilh, Martijn A. Huynen, Marc Strous posted to assembly metagenomics methods population tiling by sharpton on 2009-07-03 23:29:03 as along with 7 people and 1 group dakelley druvus kinestetika ThomasDOtto jasontsai skembel jmeppley iSEEM
	Microbial community profiling for human microbiome projects: Tools, techniques, and challenges [My Copy] Genome Research, Vol. 19, No. 7. (21 July 2009), pp. 1141-1152. by Micah Hamady, Rob Knight posted to human iseem metagenomics review by sharpton on 2009-07-03 23:14:06 as along with 6 people and 2 groups jbhiatt dakelley skembel djkt ppgardne neils iSEEM Journal picks
	Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria [My Copy] The ISME Journal by Kevin Penn, Caroline Jenkins, Markus Nett, et al.Daniel W. Udwary, Erin A. Gontang, Ryan P. Mcglinchey, Brian Foster, Alla Lapidus, Sheila Podell, Eric E. Allen, Bradley S. Moore, Paul R. Jensen1 posted to comparative evolution gene genetics genomics horizontal marine metabolites microbe population secondary species transfer by sharpton on 2009-07-02 00:32:20 as
	Population genomic analysis of strain variation in Leptospirillum group II bacteria involved in acid mine drainage formation. [My Copy] PLoS biology, Vol. 6, No. 7. (22 July 2008), e177. by S. L. Simmons, G. Dibartolo, V. J. Denef, D. S. Goltsman, M. P. Thelen, J. F. Banfield posted to amd banfield genetics genomics leptospirillum metagenomics population by sharpton on 2009-07-01 19:24:55 as along with 3 people and 1 group idoerg druvus djkt iSEEM
	Antibiotics in Nature: Beyond Biological Warfare [My Copy] Science, Vol. 324, No. 5935. (26 June 2009), pp. 1637-1639. by Christine Mlot posted to antibiotics biofilm communication messenger metabolites microbes novelty prokaryotes secondary by sharpton on 2009-07-01 18:28:44 as along with 2 people cambray paulschlesinger
	Orphelia: predicting genes in metagenomic sequencing reads [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W101-105. by Katharina J. Hoff, Thomas Lingner, Peter Meinicke, Maike Tech posted to algorithm annotation gene metagenomics novelty prediction by sharpton on 2009-06-12 23:40:33 as along with 4 people mlangill Thaverkamp jmeppley neils
	MetaGeneAnnotator: Detecting Species-Specific Patterns of Ribosomal Binding Site for Precise Gene Prediction in Anonymous Prokaryotic and Phage Genomes [My Copy] DNA Res, Vol. 15, No. 6. (1 December 2008), pp. 387-396. by Hideki Noguchi, Takeaki Taniguchi, Takehiko Itoh posted to annotation gene metagenomics novelty prediction by sharpton on 2009-06-12 23:37:48 as along with 1 person mlangill
	Constructing genomic maps of positive selection in humans: Where do we go from here? [My Copy] Genome Research, Vol. 19, No. 5. (May 2009), pp. 711-722. by Joshua M. Akey posted to evolution genome human positive selection statistics by sharpton on 2009-06-01 21:06:08 as along with 6 people aprasad VGreiff Zephyrus gjuggler djkt ilyashl
	TOPD/FMTS: a new software to compare phylogenetic trees [My Copy] Bioinformatics, Vol. 23, No. 12. (25 April 2007), pp. btm135-1558. by Pere Puigbo, Santiago Garcia-Vallve, James O. McInerney posted to evolution phylogenetics by sharpton on 2009-06-01 20:26:37 as along with 6 people gjuggler vallve BioNica druvus dparks tny
	The impact of genomics on the study of natural variation in Arabidopsis. [My Copy] Plant physiology, Vol. 132, No. 2. (June 2003), pp. 718-725. by J. O. Borevitz, M. Nordborg posted to evolution genomics natural review variation by sharpton on 2009-04-02 22:34:39 as along with 1 person maren
	The cause and consequences of natural variation: the genome era takes off! [My Copy] Current Opinion in Plant Biology, Vol. 11, No. 2. (April 2008), pp. 99-102. by J. Demeaux, M. Koornneef posted to evolution genomics natural review variation by sharpton on 2009-04-02 22:27:33 as
	Variation in gene expression within and among natural populations. [My Copy] Nat Genet, Vol. 32, No. 2. (October 2002), pp. 261-266. by M. F. Oleksiak, G. A. Churchill, D. L. Crawford posted to evolution expression gene natural review variation by sharpton on 2009-04-02 22:26:00 as along with 1 person and 1 group adepace EisenLab
	A Comprehensive Study of Genic Variation in Natural Populations of Drosophila melanogaster. II. Estimates of Heterozygosity and Patterns of Geographic Differentiation [My Copy] Genetics, Vol. 117, No. 2. (1 October 1987), pp. 255-271. by Rama S. Singh, Lorenz R. Rhomberg posted to biodiversity evolution natural variation by sharpton on 2009-04-02 22:25:23 as
	Using DNA microarrays to study natural variation [My Copy] Current Opinion in Genetics & Development In Genomes and evolution, Vol. 16, No. 6. (December 2006), pp. 553-558. by Yoav Gilad, Justin Borevitz posted to microarrays natural review variation by sharpton on 2009-04-02 22:23:33 as along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
	A Bioinformatician's Guide to Metagenomics [My Copy] Microbiol. Mol. Biol. Rev., Vol. 72, No. 4. (1 December 2008), pp. 557-578. by Victor Kunin, Alex Copeland, Alla Lapidus, Konstantinos Mavromatis, Philip Hugenholtz posted to bioinformatics comparative genome metagenomics microbe by sharpton on 2009-02-06 22:06:14 as along with 39 people and 8 groups CorinYeats sconlan jasontsai halinat hwright michaelbarton taylor73 esyoun bluto idoerg hpaces skembel inquil EKotlarska anphony stajich vrich vaulot adgrativol jakechen balicea dbk GustavoLacerda guhjy hessec fhalbrit Zephyrus anazhu dswan sjcockell Borelli druvus azazello kinestetika jmeppley neils Katje allysonlister skato_toyaku Orengo Group Journal Picks Shared Literature Resource of the Microbial Fitness Group - MPI Bremen iSEEM Papers recommended by the Roscoff Plankton Group Microbial-Ecology Translational Bioinformatics Roswell Cancer Crosstalk microbiology_nijmegen
	Population genomics in natural microbial communities [My Copy] Trends in Ecology & Evolution, Vol. 21, No. 9. (September 2006), pp. 508-516. by Rachel J. Whitaker, Jillian F. Banfield posted to ecology evolution genomics metagenomics population by sharpton on 2009-02-06 19:45:05 as along with 4 people skato_toyaku azazello jmeppley bluto
	Lineages of acidophilic archaea revealed by community genomic analysis. [My Copy] Science, Vol. 314, No. 5807. (22 December 2006), pp. 1933-1935. by B. J. Baker, G. W. Tyson, R. I. Webb, et al.J. Flanagan, P. Hugenholtz, E. E. Allen, J. F. Banfield posted to ecology evolution genomics metagenomics novelty prokaryotes by sharpton on 2009-02-06 19:43:49 as along with 3 people skembel tkandell theseuskf
	Genome dynamics in a natural archaeal population [My Copy] PNAS, Vol. 104, No. 6. (6 February 2007), pp. 1883-1888. by Eric E. Allen, Gene W. Tyson, Rachel J. Whitaker, John C. Detter, Paul M. Richardson, Jillian F. Banfield posted to ecology evolution genomics metagenomics population prokaryotes by sharpton on 2009-02-06 19:39:51 as along with 4 people and 1 group AaronDarling azazello jmeppley kinestetika microbiology_nijmegen
	Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria [My Copy] Nature (07 March 2007) by Ian Lo, Vincent J. Denef, Nathan C. Verberkmoes, et al.Manesh B. Shah, Daniela Goltsman, Genevieve Dibartolo, Gene W. Tyson, Eric E. Allen, Rachna J. Ram, Chris J. Detter, Paul Richardson, Michael P. Thelen, Robert L. Hettich, Jillian F. Banfield posted to meta by sharpton on 2009-02-06 19:38:14 as along with 6 people and 3 groups azazello kinestetika jmeppley rabu BoranKartal jlgreen microbiology_nijmegen iSEEM Green Lab
	Genetic exchange across a species boundary in the archaeal genus ferroplasma. [My Copy] Genetics, Vol. 177, No. 1. (September 2007), pp. 407-416. by J. M. Eppley, G. W. Tyson, W. M. Getz, J. F. Banfield posted to ecology evolution metagenomics prokaryotes speciation by sharpton on 2009-02-06 19:37:08 as along with 3 people AaronDarling azazello jmeppley
	Strainer: Software for analysis of population variation in community genomic datasets [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007) by John Eppley, Gene Tyson, Wayne Getz, Jillian Banfield posted to metagenomics software by sharpton on 2009-02-02 19:48:09 as along with 3 people guhjy jmeppley Thaverkamp
	Algorithmic approaches for genome rearrangement: a review [My Copy] Systems, Man, and Cybernetics, Part C: Applications and Reviews, IEEE Transactions on In Systems, Man, and Cybernetics, Part C: Applications and Reviews, IEEE Transactions on, Vol. 36, No. 5. (2006), pp. 636-648. by Zimao Li, Lusheng Wang, Kaizhong Zhang posted to evolution gene order review synteny by sharpton on 2008-05-19 22:31:53 as
	On the Structure of Syntenic Distance [My Copy] Journal of Computational Biology, Vol. 8, No. 1. (2001), pp. 53-67. by David L. Nowell posted to evolution gene order synteny by sharpton on 2008-05-19 22:30:26 as
	Fourfold faster rate of genome rearrangement in nematodes than in Drosophila. [My Copy] Genome research, Vol. 12, No. 6. (1 June 2002), pp. 857-867. by Avril Coghlan, Kenneth H. Wolfe posted to evolution gene order synteny by sharpton on 2008-05-19 22:29:35 as along with 4 people and 1 group rshe thegoose2 tharris hausen C. elegans / WormBase
	Measures of Synteny Conservation Between Species Pairs [My Copy] Genetics, Vol. 162, No. 1. (1 September 2002), pp. 441-448. by Elizabeth A. Housworth, John Postlethwait posted to evolution gene order synteny by sharpton on 2008-05-19 22:28:37 as
	Structural dynamics of eukaryotic chromosome evolution. [My Copy] Science (New York, N.Y.), Vol. 301, No. 5634. (8 August 2003), pp. 793-797. by E. E. Eichler, D. Sankoff posted to evolution gene order synteny by sharpton on 2008-05-19 22:27:42 as along with 4 people Annab APRegier timflutre david_parsons
	How Malleable is the Eukaryotic Genome? Extreme Rate of Chromosomal Rearrangement in the Genus Drosophila [My Copy] Genome Res., Vol. 11, No. 2. (1 February 2001), pp. 230-239. by Jose M. Ranz, Ferran Casals, Alfredo Ruiz posted to evolution gene order synteny by sharpton on 2008-05-19 22:26:35 as
	Prevalence of small inversions in yeast gene order evolution [My Copy] Proceedings of the National Academy of Sciences, Vol. 97, No. 26. (19 December 2000), pp. 14433-14437. by Cathal Seoighe, Nancy Federspiel, Ted Jones, et al.Nancy Hansen, Vesna Bivolarovic, Ray Surzycki, Raquel Tamse, Caridad Komp, Lucas Huizar, Ronald W. Davis, Stewart Scherer, Evelyn Tait, Duncan J. Shaw, David Harris, Lee Murphy, Karen Oliver, Kate Taylor, Marie-Adele Rajandream, Bart G. Barrell, Kenneth H. Wolfe posted to evolution gene order synteny by sharpton on 2008-05-19 22:25:20 as
	Expected Gene Order Distances and Model Selection in Bacteria. [My Copy] Bioinformatics (Oxford, England) (1 April 2008) by Daniel Dalevi, Niklas Eriksen posted to bacteria gene genome microbe order synteny by sharpton on 2008-05-19 19:15:15 as along with 4 people and 1 group AaronDarling maximilianh Ema cisevol BergmanLab

Note: You may cite this page as: http://www.citeulike.org/user/sharpton

Result page: 1 2 Next

evolution	21
metagenomics	16
gene	15
genomics	14
population	11
genome	10
order	10
synteny	10
comparative	7
review	7
genetics	6
human	6
variation	6
ecology	5
natural	5
novelty	5
prokaryotes	5
diversity	4
marine	4
selection	4
assembly	3
metabolites	3
microbe	3
microbiome	3
phylogenetics	3
positive	3
rna-seq	3
species	3
structure	3
algorithm	2
annotation	2
bacteria	2
binning	2
bioinformatics	2
circular	2
community	2
hgt	2
methods	2
microbial	2
model	2
permutation	2
phylogenetic	2
prediction	2
secondary	2
snp	2
solexa	2
statistics	2
virus	2
adaptation	1
algea	1
amd	1
analysis	1
antibiotics	1
apicomplexan	1
association	1
bacterial_communities	1
banfield	1
biodiversity	1
biofilm	1
biogeography	1
biomarkers	1
celegans	1
clades	1
classification	1
coccipaper	1
communication	1
community_assembly	1
community_composition	1
concept	1
convergence	1
core	1
coverage	1
detection	1
encode	1
environmental	1
expression	1
fst	1
function	1
geochemistry	1
gut	1
history	1
horizontal	1
imm	1
infinite	1
innovation	1
interaction	1
iseem	1
leptospirillum	1
messenger	1
meta	1
metabolic	1
metagenome	1
method	1
microarrays	1
microbes	1
microbiology	1
microbiota	1
microflora	1
mycology	1
neurospora	1
neutral	1
newseq	1
ocean	1
orthology	1
otu	1
pangenome	1
pathway	1
pathways	1
phylogenomics	1
protein	1
reivew	1
resequencing	1
rna	1
scan	1
screen	1
sites	1
software	1
speciation	1
species_data	1
strain	1
taxonomy	1
temoporal	1
temporal_variability	1
tiling	1
transcription	1
transfer	1
unifrac	1
virome	1
world	1
worm	1

sharpton's library 61 articles Export

sharpton's tags