shikin's database [23 articles] Export

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	Recent developments in public proteomic MS repositories and pipelines. [My Copy] Proteomics, Vol. 9, No. 4. (February 2009), pp. 861-881. by Jennifer A. Mead, Luca Bianco, Conrad Bessant posted to proteomics method database by shikin on 2009-09-24 16:34:43 as along with 2 people guhjy fishtank
	Database on Demand - an online tool for the custom generation of FASTA-formatted sequence databases. [My Copy] Proteomics, Vol. 9, No. 18. (September 2009), pp. 4421-4424. by Florian Reisinger, Lennart Martens posted to proteomics database by shikin on 2009-09-24 16:16:19 as
	Human Protein Reference Database--2009 update. [My Copy] Nucleic acids research, Vol. 37, No. Database issue. (6 January 2009), gkn892. by T. S. Keshava Prasad, Renu Goel, Kumaran Kandasamy, et al.Shivakumar Keerthikumar, Sameer Kumar, Suresh Mathivanan, Deepthi Telikicherla, Rajesh Raju, Beema Shafreen, Abhilash Venugopal, Lavanya Balakrishnan, Arivusudar Marimuthu, Sutopa Banerjee, Devi S. Somanathan, Aimy Sebastian, Sandhya Rani, Somak Ray, C. J. Harrys Kishore, Sashi Kanth, Mukhtar Ahmed, Manoj K. Kashyap, Riaz Mohmood, Y. L. Ramachandra, V. Krishna, B. Abdul Rahiman, Sujatha Mohan, Prathibha Ranganathan, Subhashri Ramabadran, Raghothama Chaerkady, Akhilesh Pandey posted to proteomics database by shikin on 2009-09-24 15:17:26 as along with 7 people marti swp09 ipark-kaist diamantis sjcockell mpitman renatomilani
	Importing ArrayExpress datasets into R/Bioconductor. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 16. (15 August 2009), pp. 2092-2094. by Audrey Kauffmann, Tim F. Rayner, Helen Parkinson, et al.Misha Kapushesky, Margus Lukk, Alvis Brazma, Wolfgang Huber posted to r microarray database by shikin on 2009-09-01 10:24:29 as along with 12 people and 2 groups tonamswish daforerog jperkins ealloza pkonings lwaldron dswan guhjy chrisamiller nuin neils phoenixzxl Orengo Group Journal Picks Bioinformatics
	NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins [My Copy] Nucleic Acids Research, Vol. 35, No. Supplement 1. (January 2007), pp. D61-D65. by Pruitt, D. Kim, Tatusova, Tatiana, Maglott, R. Donna posted to database by shikin on 2009-06-23 12:12:47 as along with 2 people marti nlapalu
	Meta-analysis of microarray results: challenges, opportunities, and recommendations for standardization. [My Copy] Gene, Vol. 401, No. 1-2. (15 October 2007), pp. 12-18. by Patrick Cahan, Felicia Rovegno, Denise Mooney, John C. Newman, Georges St Laurent, Timothy A. McCaffrey posted to database meta-analysis microarray by shikin on 2009-02-24 18:59:33 as along with 5 people daforerog guhjy jfr akastrin GeeSharpMinor
	NCBI GEO: mining tens of millions of expression profiles--database and tools update. [My Copy] Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007) by T. Barrett, D. B. Troup, S. E. Wilhite, et al.P. Ledoux, D. Rudnev, C. Evangelista, I. F. Kim, A. Soboleva, M. Tomashevsky, R. Edgar posted to database gene_expression genomics temp by shikin on 2009-02-17 17:33:20 as along with 8 people allenyu guhjy jfr balajis hpiwowar incovoma pziarsolo tvdbulck
	ArrayExpress--a public database of microarray experiments and gene expression profiles. [My Copy] Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007) by H. Parkinson, M. Kapushesky, M. Shojatalab, et al.N. Abeygunawardena, R. Coulson, A. Farne, E. Holloway, N. Kolesnykov, P. Lilja, M. Lukk, R. Mani, T. Rayner, A. Sharma, E. William, U. Sarkans, A. Brazma posted to annotation database gene_expression microarray temp by shikin on 2009-02-17 16:59:12 as along with 6 people bertelsen jfr balajis hpiwowar ghattem tvdbulck
	The Gene Ontology (GO) project in 2006. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by posted to database by shikin on 2009-02-17 16:56:27 as along with 3 people mgomes dullhunk kluck
	Reactome knowledgebase of human biological pathways and processes. [My Copy] Nucleic acids research, Vol. 37, No. Database issue. (1 January 2009), pp. D619-622. by Lisa Matthews, Gopal Gopinath, Marc Gillespie, et al.Michael Caudy, David Croft, Bernard de Bono, Phani Garapati, Jill Hemish, Henning Hermjakob, Bijay Jassal, Alex Kanapin, Suzanna Lewis, Shahana Mahajan, Bruce May, Esther Schmidt, Imre Vastrik, Guanming Wu, Ewan Birney, Lincoln Stein, Peter D'Eustachio posted to database pathway temp by shikin on 2009-02-17 16:30:23 as along with 7 people chica agomez Scis0000002 jfr fgibson birney guhjy
	BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems. [My Copy] Nucleic acids research, Vol. 34, No. Database issue. (1 January 2006), pp. D689-691. by Nicolas Le Novère, Benjamin Bornstein, Alexander Broicher, et al.Mélanie Courtot, Marco Donizelli, Harish Dharuri, Lu Li, Herbert Sauro, Maria Schilstra, Bruce Shapiro, Jacky L. Snoep, Michael Hucka posted to database kinetics_modeling by shikin on 2009-02-09 19:23:52 as along with 11 people and 2 groups irenas jporternj yujiangwang peterli behindtherabbit allysonlister wnpx dullhunk dagmar lenov pmendes dIEMoSIRIS compneur
	Reactome: a knowledge base of biologic pathways and processes [My Copy] Genome Biology, Vol. 8, No. 3. (16 March 2007), R39. by Imre Vastrik, Peter D'Eustachio, Esther Schmidt, et al.Geeta J. Tope, Gopal Gopinath, David Croft, Bernard de Bono, Marc Gillespie, Bijay Jassal, Suzanna Lewis, Lisa Matthews, Guanming Wu, Ewan Birney, Lincoln Stein posted to database pathway-analysis by shikin on 2009-02-05 14:29:46 as along with 15 people ipark-kaist neilswainston peterli bertelsen aramesh2 dolchan fgibson reyez guhjy dragonrez jfr balajis raiyar toshiaki_katayama AlexanderPico
	GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor. [My Copy] Bioinformatics (12 May 2007) by Sean Davis, Paul S S. Meltzer posted to database r by shikin on 2008-12-02 16:16:43 as along with 10 people and 1 group brianb dswan neils guhjy jfr ugengma giovenko ablejec zhouyu bertelsen Bioinformatics
	An improved version of the DNA Methylation database (MethDB). [My Copy] Nucleic acids research, Vol. 31, No. 1. (1 January 2003), pp. 75-77. by C. Amoreira, W. Hindermann, C. Grunau posted to database methylation by shikin on 2008-11-17 16:08:48 as
	ArrayWiki: an enabling technology for sharing public microarray data repositories and meta-analyses. [My Copy] BMC bioinformatics, Vol. 9 Suppl 6 (2008) by Todd H. Stokes, J. T. Torrance, Henry Li, May D. Wang posted to database microarray by shikin on 2008-10-23 08:50:18 as along with 9 people daforerog PaoloRomano neils jfr lptolik yas guhjy thomaskelder GeeSharpMinor
	NCBI GEO: mining millions of expression profiles--database and tools. [My Copy] Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005) by T. Barrett, T. O. Suzek, D. B. Troup, et al.S. E. Wilhite, W. C. Ngau, P. Ledoux, D. Rudnev, A. E. Lash, W. Fujibuchi, R. Edgar posted to database microarray by shikin on 2008-09-09 16:14:58 as along with 4 people balajis xwbcn gpalidwor frohike
	Development of a large-scale chemogenomics database to improve drug candidate selection and to understand mechanisms of chemical toxicity and action. [My Copy] J Biotechnol, Vol. 119, No. 3. (29 September 2005), pp. 219-244. by B. Ganter, S. Tugendreich, C. I. Pearson, et al.E. Ayanoglu, S. Baumhueter, K. A. Bostian, L. Brady, L. J. Browne, J. T. Calvin, G. J. Day, N. Breckenridge, S. Dunlea, B. P. Eynon, L. M. Furness, J. Ferng, M. R. Fielden, S. Y. Fujimoto, L. Gong, C. Hu, R. Idury, M. S. Judo, K. L. Kolaja, M. D. Lee, C. McSorley, J. M. Minor, R. V. Nair, G. Natsoulis, P. Nguyen, S. M. Nicholson, H. Pham, A. H. Roter, D. Sun, S. Tan, S. Thode, A. M. Tolley, A. Vladimirova, J. Yang, Z. Zhou, K. Jarnagin posted to database iconix by shikin on 2008-07-03 16:39:54 as along with 1 person jdiggans
	Entrez Gene: gene-centered information at NCBI. [My Copy] Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005) by D. Maglott, J. Ostell, K. D. Pruitt, T. Tatusova posted to database genomics by shikin on 2008-04-15 12:08:35 as along with 5 people and 2 groups martingerner bundschu incovoma pablomendes BioNica generif_paper GeneGo
	Pancreatic Expression database: a generic model for the organization, integration and mining of complex cancer datasets [My Copy] BMC Genomics, Vol. 8 (28 November 2007), 439. by Claude Chelala, Stephan A. Hahn, Hannah J. Whiteman, et al.Sayka Barry, Deepak Hariharan, Tomasz P. Radon, Nicholas R. Lemoine, Tatjana Crnogorac-Jurcevic posted to cancer database gene_expression genomics by shikin on 2008-04-15 08:56:39 as along with 1 person and 1 group jfr GeneGo
	The ArrayExpress gene expression database: a software engineering and implementation perspective. [My Copy] Bioinformatics, Vol. 21, No. 8. (15 April 2005), pp. 1495-1501. by U. Sarkans, H. Parkinson, G. G. Lara, et al.A. Oezcimen, A. Sharma, N. Abeygunawardena, S. Contrino, E. Holloway, P. Rocca-Serra, G. Mukherjee, M. Shojatalab, M. Kapushesky, S. A. Sansone, A. Farne, T. Rayner, A. Brazma posted to database genomics by shikin on 2008-02-12 15:26:33 as
	ONCOMINE: a cancer microarray database and integrated data-mining platform. [My Copy] Neoplasia, Vol. 6, No. 1. (b 2004), pp. 1-6. by D. R. Rhodes, J. Yu, K. Shanker, et al.N. Deshpande, R. Varambally, D. Ghosh, T. Barrette, A. Pandey, A. M. Chinnaiyan posted to cancer database genomics by shikin on 2008-02-12 15:14:01 as
	A method of microarray data storage using array data type. [My Copy] Comput Biol Chem, Vol. 31, No. 2. (April 2007), pp. 143-147. by L. C. Tsoi, W. J. Zheng posted to database genomics systems_biology by shikin on 2008-01-25 12:27:31 as
	The Molecular Biology Database Collection: 2007 update. [My Copy] Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007) by M. Y. Galperin posted to database systems_biology by shikin on 2007-10-22 17:45:05 as along with 5 people and 1 group yas balajis moborg dullhunk asddd T_lab

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gene_expression	97
systems_biology	93
microarray	79
genomics	78
statistics	74
cancer	52
meta-analysis	52
thesis	45
pathway-analysis	38
network	37
psoriasis	33
genego	29
proteomics	28
cnv	26
database	23
r	23
crohn	22
method	21
snp	21
affy	18
gwas	18
enrichment	17
breast	16
gene_association	16
toxicology	16
normalization	15
diabetes	12
illumina	12
integration	12
nephrotoxicity	11
gsea	10
rage	10
bayesian	9
qc	9
software	9
stem_cells	9
temp	9
annotation	8
immunology	8
methylation	8
nature_sysbio_08	8
evolution	7
ideker	7
mirna	6
ppi	6
sequencing	6
solexa	6
workflow	6
clustering	5
kinetics_modeling	5
metabolomics	4
pathway	4
permutation_test	4
synergy	4
classification	3
functional_analysis	3
gene_set	3
hood	3
pancreas	3
rank-aggregation	3
roc	3
rt-pcr	3
sage	3
ap1	2
barabasi	2
coexpression	2
differential_expression	2
history	2
iconix	2
interactome	2
mged	2
signature	2
background_correction	1
batch-correction	1
bg_correction	1
comparison	1
copynumber	1
development	1
genome_browser	1
hgp	1
hmm	1
linguistics	1
maqc	1
misc	1
onthology	1
prostate	1
sample-size	1
transfac	1

shikin's database [23 articles] Export

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