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shikin's microarray [19 articles]

Recent papers added to shikin's library classified by the tag microarray. You can also see everyone's microarray.
  • Design and implementation of microarray gene expression markup language (MAGE-ML).
    Genome Biol, Vol. 3, No. 9. (23 August 2002)
    by PT Spellman, M Miller, J Stewart, C Troup, U Sarkans, S Chervitz, D Bernhart, G Sherlock, C Ball, M Lepage, M Swiatek, WL Marks, J Goncalves, S Markel, D Iordan, M Shojatalab, A Pizarro, J White, R Hubley, E Deutsch, M Senger, BJ Aronow, A Robinson, D Bassett, CJ Stoeckert, A Brazma
    posted to microarray by shikin on 2008-09-09 18:49:51 as ** along with 3 people and 1 group irenas katerinakal dansullivanblk dbk-lab
  • NCBI GEO: mining millions of expression profiles--database and tools.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    by T Barrett, TO Suzek, DB Troup, SE Wilhite, WC Ngau, P Ledoux, D Rudnev, AE Lash, W Fujibuchi, R Edgar
    posted to microarray database by shikin on 2008-09-09 16:14:58 as ** along with 4 people balajis xwbcn gpalidwor frohike
  • A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB
    BMC Bioinformatics, Vol. 7 (06 November 2006), 489.
    by Tim F Rayner, Philippe Rocca-Serra, Paul T Spellman, Helen C Causton, Anna Farne, Ele Holloway, Rafael A Irizarry, Junmin Liu, Donald S Maier, Michael Miller, Kjell Petersen, John Quackenbush, Gavin Sherlock, Christian J Stoeckert, Joseph White, Patricia L Whetzel, Farrell Wymore, Helen Parkinson, Ugis Sarkans, Catherine A Ball, Alvis Brazma
    posted to microarray by shikin on 2008-09-09 16:02:36 as ** along with 4 people bertelsen jfr zakmck dansullivanblk
  • MGED standards: work in progress.
    Omics : a journal of integrative biology, Vol. 10, No. 2. (2006), pp. 138-144.
    by CA Ball, A Brazma
    posted to mged microarray by shikin on 2008-06-17 14:32:02 as ** along with 1 person yggdrasil
  • The MGED Ontology: a resource for semantics-based description of microarray experiments
    Bioinformatics, Vol. 22, No. 7. (1 April 2006), pp. 866-873.
    by Patricia L Whetzel, Helen Parkinson, Helen C Causton, Liju Fan, Jennifer Fostel, Gilberto Fragoso, Laurence Game, Mervi Heiskanen, Norman Morrison, Philippe Rocca-Serra, Susanna-Assunta Sansone, Chris Taylor, Joseph White, Christian J Stoeckert
    posted to mged microarray by shikin on 2008-06-17 14:31:44 as ** along with 2 people jfr dansullivanblk
  • Minimum information about a microarray experiment (MIAME)-toward standards for microarray data.
    Nat Genet, Vol. 29, No. 4. (December 2001), pp. 365-371.
    by A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, C Stoeckert, J Aach, W Ansorge, CA Ball, HC Causton, T Gaasterland, P Glenisson, FC Holstege, IF Kim, V Markowitz, JC Matese, H Parkinson, A Robinson, U Sarkans, S Schulze-Kremer, J Stewart, R Taylor, J Vilo, M Vingron
    posted to microarray by shikin on 2008-06-17 14:07:45 as ** along with 9 people and 3 groups gabe_rosser irenas setar jandot fisherp jeremymiller aconesa sgoetz katerinakal dbk-lab GeschwindLab GeneGo
  • Statistical tests for differential expression in cDNA microarray experiments
    Genome Biology, Vol. 4, No. 4. (2003)
    by Xiangqin Cui, Gary Churchill
    posted to gene_expression microarray statistics by shikin on 2008-06-04 18:29:30 as ** along with 4 people pengchy egreenfest heliopais waszak
  • Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data
    Nucleic Acids Research, Vol. 33, No. 20. (2005), pp. e175-e175.
    by Manhong Dai, Pinglang Wang, Andrew D Boyd, Georgi Kostov, Brian Athey, Edward G Jones, William E Bunney, Richard M Myers, Terry P Speed, Huda Akil, Stanley J Watson, Fan Meng
    posted to affy microarray by shikin on 2008-06-02 15:09:44 as ** along with 9 people and 2 groups giovenko pcahan1 frohike incovoma nicholso heliopais Montrachet bertelsen waszak Bioinformatics GeneGo
  • notes The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements
    Nat Biotech, Vol. 24, No. 9. (2006), pp. 1151-1161.
    posted to microarray by shikin on 2008-05-15 13:28:34 as ** along with 12 people pengchy kentsis jfr jdiggans qmwwallace cberry shigepong caseybrown giovenko slevy03 jyuh vmsr
  • Probe set algorithms: Is there a rational best bet?
    BMC Bioinformatics, Vol. 7 (30 August 2006), 395.
    by Jinwook Seo, Eric P Hoffman
    posted to affy microarray normalization by shikin on 2008-05-06 17:59:11 as ** along with 5 people heliopais jfr ghattem rschulz bertelsen
  • Evaluating different methods of microarray data normalization
    BMC Bioinformatics, Vol. 7 (23 October 2006), 469.
    by Andre Fujita, Joao R Sato, Leonardo O Rodrigues, Carlos E Ferreira, Mari C Sogayar
    posted to microarray normalization by shikin on 2008-05-06 17:16:00 as ** along with 2 people jfr GeeSharpMinor
  • Reproducibility of microarray data: a further analysis of microarray quality control (MAQC)data
    BMC Bioinformatics, Vol. 8 (25 October 2007), 412.
    by James Chen, Huey-Miin Hsueh, Robert Delongchamp, Chien-Ju Lin, Chen-An Tsai
    posted to microarray by shikin on 2008-05-05 16:27:26 as ** along with 5 people jfr shigepong GeeSharpMinor giovenko jyuh
  • notes High density synthetic oligonucleotide arrays.
    Nat Genet, Vol. 21, No. 1 Suppl. (January 1999), pp. 20-24.
    by RJ Lipshutz, SP Fodor, TR Gingeras, DJ Lockhart
    posted to history microarray by shikin on 2008-05-05 15:33:42 as ** along with 2 people and 1 group jeremymiller incovoma GeschwindLab
  • Gene expression studies using microarrays: principles, problems, and prospects.
    Advances in physiology education, Vol. 26, No. 1-4. (December 2002), pp. 256-270.
    by D Murphy
    posted to gene_expression microarray by shikin on 2008-05-05 14:27:27 as **
  • Quantitative monitoring of gene expression patterns with a complementary DNA microarray.
    Science, Vol. 270, No. 5235. (20 October 1995), pp. 467-470.
    by M Schena, D Shalon, RW Davis, PO Brown
    posted to history microarray by shikin on 2008-05-05 13:03:11 as ** along with 9 people and 1 group gabe_rosser dragonrez Dax42 stsaft fisherp jeremymiller tvdbulck talponer frohike GeschwindLab
  • Noise in Gene Expression: Origins, Consequences, and Control
    Science, Vol. 309, No. 5743. (23 September 2005), pp. 2010-2013.
    by Jonathan M Raser, Erin K O'Shea
    posted to gene_association microarray by shikin on 2008-05-05 12:38:49 as **** along with 13 people and 2 groups rklancer monod dayjm xico nirfriedman koller mhucka margaritis suizan dylanwalker kagibbs klo bpcusack WetBiology GeneGo
  • notes How noisy and replicable are DNA microarry data?
    International journal of bioinformatics research and applications, Vol. 1, No. 1. (2005), pp. 31-50.
    by S Sundaresh, SP Hung, GW Hatfield, P Baldi
    posted to microarray by shikin on 2008-05-05 12:31:13 as **
  • Technological platforms for microarray gene expression profiling.
    Advances in experimental medicine and biology, Vol. 593 (2007), pp. 12-18.
    by S Mandruzzato
    posted to microarray by shikin on 2008-05-04 15:13:54 as *****
  • Computational analysis of microarray data.
    Nat Rev Genet, Vol. 2, No. 6. (June 2001), pp. 418-427.
    by J Quackenbush
    posted to gene_expression microarray statistics by shikin on 2008-05-04 14:33:40 as *** along with 5 people and 1 group bryank chad_davis frohike atombjut waghsk GeneGo
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