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Recent papers matching shikin's watchlist criteria

	RDML: structured language and reporting guidelines for real-time quantitative PCR data. [My Copy] Nucleic acids research, Vol. 37, No. 7. (17 April 2009), pp. 2065-2069. by Steve Lefever, Jan Hellemans, Filip Pattyn, et al.Daniel R. Przybylski, Chris Taylor, René Geurts, Andreas Untergasser, Jo Vandesompele, RDML consortium posted to xml standards rt-pcr by jfr on 2009-11-27 13:20:42 as along with 3 people daforerog Vincent_Rouilly guhjy
	Systematic validation of predicted microRNAs for cyclin D1. [My Copy] BMC cancer, Vol. 9, No. 1. (18 June 2009), 194. by Qiong Jiang, Ming-Guang G. Feng, Yin-Yuan Y. Mo posted to mirna ccnd1 by jfr on 2009-11-27 11:41:32 as along with 1 person and 1 group guhjy microRNA
	Optimized detection of differential expression in global profiling experiments: case studies in clinical transcriptomic and quantitative proteomic datasets [My Copy] Brief Bioinform (23 June 2009), bbp033. by Laura L. Elo, Jukka Hiissa, Jarno Tuimala, Aleksi Kallio, Eija Korpelainen, Tero Aittokallio posted to proteomics meta-analysis gene_expression differential_expression by jfr on 2009-11-27 11:23:32 as
	A novel and universal method for microRNA RT-qPCR data normalization. [My Copy] Genome biology, Vol. 10, No. 6. (16 June 2009), R64. by Pieter Mestdagh, Pieter Van Vlierberghe, An De Weer, et al.Daniel Muth, Frank Westermann, Frank Speleman, Jo Vandesompele posted to rt-pcr normalization mirna by jfr on 2009-11-27 11:21:04 as along with 10 people and 2 groups daforerog fishtank megraw guhjy gdb mlog lwaldron valeriehilgers Stew druvus microRNA Bioinformatics - CRUK
	Reproducible research and Biostatistics [My Copy] Biostat, Vol. 10, No. 3. (1 July 2009), pp. 405-408. by Roger D. Peng posted to reproducible_research editorial by jfr on 2009-11-27 11:13:35 as
	K-Boost: a scalable algorithm for high-quality clustering of microarray gene expression data. [My Copy] Journal of computational biology : a journal of computational molecular cell biology, Vol. 16, No. 6. (June 2009), pp. 859-873. by Filippo Geraci, Mauro Leoncini, Manuela Montangero, Marco Pellegrini, M. Elena Renda posted to clustering by jfr on 2009-11-27 11:09:26 as along with 1 person and 2 groups barry structural_bioinformatics Bioinformatics
	Targets of genome copy number reduction in primary breast cancers identified by integrative genomics. [My Copy] Genes, chromosomes & cancer, Vol. 46, No. 3. (March 2007), pp. 288-301. by Wei Chen, Manuel Salto-Tellez, Nallasivam Palanisamy, et al.Kumaresan Ganesan, Qingsong Hou, Lay Keng K. Tan, Lang Hiong H. Sii, Kosei Ito, Benita Tan, Jeanie Wu, Andrew Tay, Kok Chai C. Tan, Erik Ang, Bien Keem K. Tan, Puay Hoon H. Tan, Yoshiaki Ito, Patrick Tan posted to integration gene_expression copy-number breast_cancer by jfr on 2009-11-27 11:04:34 as along with 1 person emb51
	Current tools for the identification of miRNA genes and their targets [My Copy] Nucl. Acids Res., Vol. 37, No. 8. (18 March 2009), pp. gkp145-2433. by N. D. Mendes, A. T. Freitas, M. F. Sagot posted to review mirna_target mirna by jfr on 2009-11-27 10:53:33 as along with 17 people and 1 group hzoltan heliopais orzenil leemond31 tonamswish gdb ptrobajo guhjy dakelley GustavoLacerda giovenko natstreet druvus nuin valeriehilgers pengchy daforerog microRNA
	A compact VEGF signature associated with distant metastases and poor outcomes. [My Copy] BMC medicine, Vol. 7 (16 March 2009), 9. by Zhiyuan Hu, Cheng Fan, Chad Livasy, et al.Xiaping He, Daniel S. Oh, Matthew G. Ewend, Lisa A. Carey, Subbaya Subramanian, Robert West, Francis Ikpatt, Olufunmilayo I. Olopade, Matt van de Rijn, Charles M. Perou posted to survival metastasis gene_lists breast_cancer bio_signature by jfr on 2009-11-27 10:51:35 as along with 2 people ajaymalik frohike
	Textual Data Compression In Computational Biology: A synopsis. [My Copy] Bioinformatics (Oxford, England) (3 March 2009) by Raffaele Giancarlo, Davide Scaturro, Filippo Utro posted to review pattern_discovery data_mining compression by jfr on 2009-11-27 10:43:12 as along with 5 people heliopais reyez mitko nuin guhjy
	penalizedSVM: a R-package for feature selection SVM classification [My Copy] Bioinformatics, Vol. 25, No. 13. (1 July 2009), pp. 1711-1712. by Natalia Becker, Wiebke Werft, Grischa Toedt, Peter Lichter, Axel Benner posted to svm software r feature_selection classification by jfr on 2009-11-27 10:38:24 as along with 11 people and 2 groups sotacam ollieredfernwork rdiaz anf lwaldron dswan TRHvidsten neils operon phoenixzxl giovanni Orengo Group Journal Picks Bioinformatics
	A consistency-based consensus algorithm for de novo and reference-guided sequence assembly of short reads [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1118-1124. by Tobias Rausch, Sergey Koren, Gennady Denisov, et al.David Weese, Anne-Katrin Emde, Andreas Doring, Knut Reinert posted to software ngs assembly by jfr on 2009-11-26 13:18:41 as along with 19 people and 2 groups azazello hzoltan cthachuk GustavoLacerda jasontsai n00c nuin dakelley skembel Thaverkamp reyez TRHvidsten djkt hpaces APRegier pengchy natstreet druvus darian iSEEM Bioinformatics
	Genetic prognostic and predictive markers in colorectal cancer [My Copy] Nat Rev Cancer, Vol. 9, No. 7. (18 June 2009), pp. 489-499. by Axel Walther, Elaine Johnstone, Charles Swanton, Rachel Midgley, Ian Tomlinson, David Kerr posted to review markers colon_cancer by jfr on 2009-11-26 13:17:51 as along with 2 people manduca rdiaz
	MicroRNA miR-21 overexpression in human breast cancer is associated with advanced clinical stage, lymph node metastasis and patient poor prognosis [My Copy] RNA, Vol. 14, No. 11. (November 2008), pp. 2348-2360. by Li-Xu Yan, Xiu-Fang Huang, Qiong Shao, et al.Ma-Yan Huang, Ling Deng, Qiu-Liang Wu, Yi-Xin Zeng, Jian-Yong Shao posted to mirna mir21 breast_cancer by jfr on 2009-11-26 13:11:28 as along with 2 people and 1 group songpku Zephyrus microRNA
	Gene-expression profiling predicts recurrence in dukes' C colorectal cancer. [My Copy] Gastroenterology, Vol. 129, No. 3. (September 2005), pp. 874-884. by Diego Arango, Paivi Laiho, Antti Kokko, et al.Pia Alhopuro, Heli Sammalkorpi, Reijo Salovaara, Daniel Nicorici, Sampsa Hautaniemi, Hafid Alazzouzi, Jukka-Pekka P. Mecklin, Heikki Järvinen, Akseli Hemminki, Jaakko Astola, Simo Schwartz, Lauri A. Aaltonen posted to stageiii gene_expression colon_cancer classification by jfr on 2009-11-26 13:09:45 as along with 1 person Terkko
	A colorectal cancer expression profile that includes transforming growth factor beta inhibitor BAMBI predicts metastatic potential. [My Copy] Gastroenterology, Vol. 137, No. 1. (July 2009), pp. 165-175. by Johannes Fritzmann, Markus Morkel, Daniel Besser, et al.Jan Budczies, Frauke Kosel, Felix H. Brembeck, Ulrike Stein, Iduna Fichtner, Peter M. Schlag, Walter Birchmeier posted to tgfb metastasis gene_expression colon_cancer classification bambi by jfr on 2009-11-26 13:08:22 as
	MiRSNPs or MiR-polymorphisms, new players in microRNA mediated regulation of the cell: Introducing microRNA pharmacogenomics. [My Copy] Cell cycle (Georgetown, Tex.), Vol. 7, No. 7. (1 April 2008), pp. 853-858. by Prasun J. Mishra, Pravin J. Mishra, Debabrata Banerjee, Joseph R. Bertino posted to snp review mirna by jfr on 2009-11-26 13:07:05 as along with 1 person and 1 group valeriehilgers microRNA
	Copy number analysis indicates monoclonal origin of lethal metastatic prostate cancer [My Copy] Nat Med, Vol. 15, No. 5. (May 2009), pp. 559-565. by Wennuan Liu, Sari Laitinen, Sofia Khan, et al.Mauno Vihinen, Jeanne Kowalski, Guoqiang Yu, Li Chen, Charles M. Ewing, Mario A. Eisenberger, Michael A. Carducci, William G. Nelson, Srinivasan Yegnasubramanian, Jun Luo, Yue Wang, Jianfeng Xu, William B. Isaacs, Tapio Visakorpi, G. Steven Bova posted to snp-arrays prostate_cancer metastasis copy-number by jfr on 2009-11-26 13:06:05 as along with 3 people jessopher wimufi jbhiatt
	High-resolution analysis of copy number alterations and associated expression changes in ovarian tumors. [My Copy] BMC medical genomics, Vol. 2 (2009) by Peter M. Haverty, Lawrence S. Hon, Joshua S. Kaminker, John Chant, Zemin Zhang posted to ovarian_cancer integration gene_expression copy-number by jfr on 2009-11-25 15:01:43 as along with 2 people daed rdiaz
	High-resolution mapping of copy-number alterations with massively parallel sequencing. [My Copy] Nature methods, Vol. 6, No. 1. (30 January 2009), pp. 99-103. by Derek Y. Chiang, Gad Getz, David B. Jaffe, et al.Michael J. O'Kelly, Xiaojun Zhao, Scott L. Carter, Carsten Russ, Chad Nusbaum, Matthew Meyerson, Eric S. Lander posted to deep_sequencing copy-number by jfr on 2009-11-25 14:59:37 as along with 6 people Annab stubrown stsaft jbhiatt absterga xwbcn
	Effects of filtering by Present call on analysis of microarray experiments. [My Copy] BMC Bioinformatics, Vol. 7 (2006) by J. N. McClintick, H. J. Edenberg posted to low-level affy by jfr on 2009-11-25 14:56:50 as along with 5 people bertelsen heliopais ghattem waszak yevishere
	ToppGene Suite for gene list enrichment analysis and candidate gene prioritization. [My Copy] Nucleic acids research, Vol. 37, No. Web Server issue. (1 July 2009), gkp427. by Jing Chen, Eric E. Bardes, Bruce J. Aronow, Anil G. Jegga posted to web_server prioritization gene_set_analysis functional_classification annotation by jfr on 2009-11-25 14:55:35 as along with 5 people pininforthefjords daforerog operon guhjy psique
	Gene set-based module discovery in the breast cancer transcriptome [My Copy] BMC Bioinformatics, Vol. 10 (26 February 2009), 71. by Atsushi, Tetsu Akiyama posted to module_detection gene_set_analysis breast_cancer by jfr on 2009-11-25 14:48:29 as along with 2 people and 1 group fpattyn idonaldson Neuroblastoma
	An Integrative Analysis of microRNA and mRNA Expression-A Case Study. [My Copy] Cancer informatics, Vol. 6 (2008), pp. 369-379. by Li-Xuan X. Qin posted to mirna integration gene_expression clustering cancer by jfr on 2009-11-25 14:41:02 as along with 1 person and 1 group tonamswish microRNA
	Integrated genome-wide DNA copy number and expression analysis identifies distinct mechanisms of primary chemoresistance in ovarian carcinomas. [My Copy] Clinical cancer research : an official journal of the American Association for Cancer Research, Vol. 15, No. 4. (15 February 2009), pp. 1417-1427. by Dariush Etemadmoghadam, Anna deFazio, Rameen Beroukhim, et al.Craig Mermel, Joshy George, Gad Getz, Richard Tothill, Aikou Okamoto, Maria B. Raeder, Paul Harnett, Stephen Lade, Lars A. Akslen, Anna V. Tinker, Bianca Locandro, Kathryn Alsop, Yoke-Eng E. Chiew, Nadia Traficante, Sian Fereday, Daryl Johnson, Stephen Fox, William Sellers, Mitsuyoshi Urashima, Helga B. Salvesen, Matthew Meyerson, David Bowtell, AOCS Study Group posted to ovarian_cancer integration gene_expression copy-number chemotherapy by jfr on 2009-11-25 12:44:00 as along with 1 person rdiaz
	An integrated genomic analysis of lung cancer reveals loss of DUSP4 in EGFR-mutant tumors [My Copy] Oncogene, Vol. 28, No. 31. (15 June 2009), pp. 2773-2783. by D. Chitale, Y. Gong, B. S. Taylor, et al.S. Broderick, C. Brennan, R. Somwar, B. Golas, L. Wang, N. Motoi, J. Szoke, J. M. Reinersman, J. Major, C. Sander, V. E. Seshan, M. F. Zakowski, V. Rusch, W. Pao, W. Gerald, M. Ladanyi posted to mutation lung_cancer kras integration egfr copy-number by jfr on 2009-11-25 11:46:17 as along with 1 person frohike
	Limitations and possibilities of small RNA digital gene expression profiling [My Copy] Nat Meth, Vol. 6, No. 7. (01 July 2009), pp. 474-476. by Sam E. V. Linsen, Elzo de Wit, Georges Janssens, et al.Sheila Heater, Laura Chapman, Rachael K. Parkin, Brian Fritz, Stacia K. Wyman, Ewart de Bruijn, Emile E. Voest, Scott Kuersten, Muneesh Tewari, Edwin Cuppen posted to technology mirna deep_sequencing by jfr on 2009-11-25 11:15:03 as along with 8 people and 2 groups vingron pengchy guhjy lp2 timhubbard stajich gdb fpattyn RGASP Mycology
	Reproducible research: moving toward research the public can really trust. [My Copy] Annals of internal medicine, Vol. 146, No. 6. (20 March 2007), pp. 450-453. by Christine Laine, Steven N. Goodman, Michael E. Griswold, Harold C. Sox posted to reproducible_research by jfr on 2009-11-25 11:13:39 as
	Effect of molecular disease subsets on disease-free survival in randomized adjuvant chemotherapy trials for estrogen receptor-positive breast cancer. [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 26, No. 28. (1 October 2008), pp. 4679-4683. by Lajos Pusztai, Kristine Broglio, Fabrice Andre, W. Fraser Symmans, Kenneth R. Hess, Gabriel N. Hortobagyi posted to subtypes er-positive dfs chemotherapy breast_cancer by jfr on 2009-11-25 11:12:07 as
	Gene ranking and biomarker discovery under correlation [My Copy] Bioinformatics, Vol. 25, No. 20. (15 October 2009), pp. 2700-2707. by Verena Zuber, Korbinian Strimmer posted to feature_selection by zufar on 2009-11-23 16:54:16 as along with 7 people rdiaz pkonings ericrpaquet guhjy brianb nuin neils
	Position dependent mismatch discrimination on DNA microarrays - experiments and model. [My Copy] BMC bioinformatics, Vol. 9 (01 December 2008), 509. by Thomas Naiser, Jona Kayser, Timo Mai, Wolfgang Michel, Albrecht Ott posted to low-level affy by jfr on 2009-11-23 16:39:34 as along with 2 people talponer magusina
	Major copy proportion analysis of tumor samples using SNP arrays. [My Copy] BMC bioinformatics, Vol. 9 (21 April 2008), 204. by Cheng Li, Rameen Beroukhim, Barbara A. Weir, et al.Wendy Winckler, Levi A. Garraway, William R. Sellers, Matthew Meyerson posted to software loh copy-number affy by jfr on 2009-11-23 16:36:32 as
	Thirteen Ways to Look at the Correlation Coefficient [My Copy] The American Statistician, Vol. 42, No. 1. (1988), pp. 59-66. by Joseph L. Rodgers, Alan W. Nicewander posted to statistics correlation by jfr on 2009-11-23 16:34:48 as along with 16 people and 2 groups VGreiff flashfonic jeremygow eisdur shrikondra studentx compbio dubhelix brian davidr garyfeng irinas takahi Langam ulmer usr ReadingLab Sciences_communication_societe
	Definition of disease-free survival: this is my truth-show me yours. [My Copy] Annals of oncology : official journal of the European Society for Medical Oncology / ESMO, Vol. 16, No. 11. (November 2005), pp. 1719-1721. by Y. J. Chua, D. Sargent, D. Cunningham posted to survival dfs comment by jfr on 2009-11-23 16:33:04 as
	Exploratory analysis of the copy number alterations in glioblastoma multiforme. [My Copy] PloS one, Vol. 3, No. 12. (2008) by Pablo Freire, Marco Vilela, Helena Deus, et al.Yong-Wan W. Kim, Dimpy Koul, Howard Colman, Kenneth D. Aldape, Oliver Bogler, Alfred K. Yung, Kevin Coombes, Gordon B. Mills, Ana T. Vasconcelos, Jonas S. Almeida posted to tcga software glioblastoma copy-number by jfr on 2009-11-23 16:31:21 as along with 1 person srp33
	Rembrandt: helping personalized medicine become a reality through integrative translational research. [My Copy] Molecular cancer research : MCR, Vol. 7, No. 2. (1 February 2009), pp. 157-167. by Subha Madhavan, Jean-Claude C. Zenklusen, Yuri Kotliarov, Himanso Sahni, Howard A. Fine, Kenneth Buetow posted to translation software integration genomics by jfr on 2009-11-23 16:28:57 as along with 2 people frohike srp33
	Gene expression profiling of human lymph node metastases and matched primary breast carcinomas: clinical implications. [My Copy] Molecular oncology, Vol. 1, No. 2. (September 2007), pp. 172-180. by Mika Suzuki, David Tarin posted to review metastasis breast_cancer by jfr on 2009-11-23 16:27:59 as
	Dissecting microregulation of a master regulatory network. [My Copy] BMC genomics, Vol. 9 (23 February 2008), 88. by A. U. Sinha, V. Kaimal, J. Chen, A. G. Jegga posted to p53 mirna_regulation mirna by jfr on 2009-11-23 16:24:07 as along with 4 people and 1 group danaiancu tonamswish guhjy pengchy microRNA
	Impossibility of successful classification when useful features are rare and weak [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 22. (2 June 2009), pp. 8859-8864. by Jiashun Jin posted to feature_selection by zufar on 2009-11-23 16:19:28 as along with 4 people rdiaz gdb zwang TRHvidsten
	FANTOM4 EdgeExpressDB: an integrated database of promoters, genes, microRNAs, expression dynamics and regulatory interactions [My Copy] Genome Biology, Vol. 10, No. 4. (2009), R39. by Jessica Severin, Andrew Waterhouse, Hideya Kawaji, et al.Timo Lassmann, Erik van Nimwegen, Piotr Balwierz, Michiel de Hoon, David Hume, Piero Carninci, Yoshihide Hayashizaki, Harukazu Suzuki, Carsten Daub, Alistair Forrest posted to web_resource regulation functional_genomics by jfr on 2009-11-23 16:16:42 as along with 10 people Garamonfok rdiaz bertelsen YukaH ealloza guhjy pengchy natstreet druvus dolchan
	Impossibility of successful classification when useful features are rare and weak [My Copy] Proceedings of National Academy of Science(PNAS), Vol. 106, No. 22. (2009), pp. 8859-8864. by Jiashun Jin posted to methodology classification by jfr on 2009-11-23 16:14:16 as along with 1 person adamsi
	SDRF2GRAPH: a visualization tool of a spreadsheet-based description of experimental processes. [My Copy] BMC bioinformatics, Vol. 10 (07 May 2009), 133. by Hideya Kawaji, Yoshihide Hayashizaki, Carsten O. Daub posted to standards software mage by jfr on 2009-11-23 14:59:58 as along with 1 person guhjy
	Genome assembly reborn: recent computational challenges [My Copy] Brief Bioinform, Vol. 10, No. 4. (1 July 2009), pp. 354-366. by Mihai Pop posted to review genome_assembly by jfr on 2009-11-23 14:25:00 as along with 30 people and 1 group hzoltan cthachuk GustavoLacerda n00c agbiotec shabhonam pachorip APRegier jmcq stevebs jonilaserson michaelbarton inesdesantiago GeeSharpMinor bertelsen aprasad ananta_samudra sandfire jmeppley mlangill fgibson ppgardne TRHvidsten pengchy robsyme nuin kiekyon natstreet druvus idoerg Journal picks
	Biological knowledge management: the emerging role of the Semantic Web technologies [My Copy] Brief Bioinform, Vol. 10, No. 4. (1 July 2009), pp. 392-407. by Erick Antezana, Martin Kuiper, Vladimir Mironov posted to semantic_web review by jfr on 2009-11-23 14:24:01 as along with 15 people jmuhlich guhjy artaban421 cmzmasek pharmdoc lmichan bertelsen kshameer sobolevnrm dansullivanblk allysonlister mikel_egana dullhunk fgibson druvus
	Computational methods for discovering gene networks from expression data [My Copy] Brief Bioinform, Vol. 10, No. 4. (1 July 2009), pp. 408-423. by Wei-Po Lee, Wen-Shyong Tzou posted to review regulation gene_networks by jfr on 2009-11-23 14:23:16 as along with 9 people and 1 group jperkins sotacam GustavoLacerda gotgenes ruichu antonkratz renatomilani lp2 TRHvidsten Orengo Group Journal Picks
	Computational systems biology of the cell cycle [My Copy] Brief Bioinform, Vol. 10, No. 4. (1 July 2009), pp. 424-434. by Attila Csikasz-Nagy posted to systems_biology review cell_cycle by jfr on 2009-11-23 14:22:17 as along with 6 people and 1 group Katieleonard jperkins abhishek_tiwari fgibson phoenixzxl agomez Orengo Group Journal Picks
	The FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation [My Copy] Genome Biology, Vol. 10, No. 4. (2009), R40. by Hideya Kawaji, Jessica Severin, Marina Lizio, et al.Andrew Waterhouse, Shintaro Katayama, Katharine Irvine, David Hume, Alistair Forrest, Harukazu Suzuki, Piero Carninci, Yoshihide Hayashizaki, Carsten Daub posted to web_resource regulation functional_genomics fantom by jfr on 2009-11-23 09:10:33 as along with 7 people rdiaz YukaH tonamswish guhjy natstreet druvus dolchan
	CLEAN: CLustering Enrichment ANalysis [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (29 July 2009), 234. by Johannes Freudenberg, Vineet Joshi, Zhen Hu, Mario Medvedovic posted to gene_expression by zufar on 2009-11-20 18:17:04 as along with 9 people brianb nuin rdiaz dswan guhjy frohike RamuAnandakrishnan barriot renatomilani
	Automated multidimensional phenotypic profiling using large public microarray repositories. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 30. (28 July 2009), pp. 12323-12328. by Min Xu, Wenyuan Li, Gareth M. James, Michael R. Mehan, Xianghong Jasmine J. Zhou posted to gene_expression_patterns by zufar on 2009-11-20 18:13:28 as along with 8 people tmmurali giovanni Borelli rdiaz guhjy TRHvidsten yaredo ptrobajo
	A modular approach for integrative analysis of large-scale gene-expression and drug-response data [My Copy] Nat Biotech, Vol. 26, No. 5. (08 May 2008), pp. 531-539. by Zoltan Kutalik, Jacques S. Beckmann, Sven Bergmann posted to gene_expression by zufar on 2009-11-20 18:13:00 as along with 10 people TRHvidsten vingron mingzhi guhjy aviad_work jfr stringertheory tmmurali oelemento ptrobajo

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gene_expression	97
systems_biology	93
microarray	79
genomics	78
statistics	74
cancer	52
meta-analysis	52
thesis	45
pathway-analysis	38
network	37
psoriasis	33
genego	29
proteomics	28
cnv	26
database	23
r	23
crohn	22
method	21
snp	21
affy	18
gwas	18
enrichment	17
breast	16
gene_association	16
toxicology	16
normalization	15
diabetes	12
illumina	12
integration	12
nephrotoxicity	11
gsea	10
rage	10
bayesian	9
qc	9
software	9
stem_cells	9
temp	9
annotation	8
immunology	8
methylation	8
nature_sysbio_08	8
evolution	7
ideker	7
mirna	6
ppi	6
sequencing	6
solexa	6
workflow	6
clustering	5
kinetics_modeling	5
metabolomics	4
pathway	4
permutation_test	4
synergy	4
classification	3
functional_analysis	3
gene_set	3
hood	3
pancreas	3
rank-aggregation	3
roc	3
rt-pcr	3
sage	3
ap1	2
barabasi	2
coexpression	2
differential_expression	2
history	2
iconix	2
interactome	2
mged	2
signature	2
background_correction	1
batch-correction	1
bg_correction	1
comparison	1
copynumber	1
development	1
genome_browser	1
hgp	1
hmm	1
linguistics	1
maqc	1
misc	1
onthology	1
prostate	1
sample-size	1
transfac	1

shikin's watchlist [more than 800 articles] Export

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