siebert's transcription [49 articles] Export

Recent papers added to siebert's library classified by the tag transcription. You can also see everyone's transcription.

Hide details

	High-resolution DNA binding specificity analysis of yeast transcription factors [My Copy] Genome research, Vol. 19, No. 4. (21 April 2009), pp. 556-566. by Cong Zhu, Kelsey Byers, Rachel Mccord, et al.Zhenwei Shi, Michael Berger, Daniel Newburger, Katrina Saulrieta, Zachary Smith, Mita Shah, Mathangi Radhakrishnan, Anthony Philippakis, Yanhui Hu, Federico De Masi, Marcin Pacek, Andreas Rolfs, Tvs Murthy, Joshua Labaer, Martha L. L. Bulyk posted to co-regulation dna_binding_specificity experimental pbm s_cerevisiae tfbs transcription transcription_regulation by siebert on 2009-05-20 16:31:56 as along with 9 people matted austin_mcdonald dolchan rpatward xwbcn absterga djkt kristallreiner aalibes
	Diversity and complexity in DNA recognition by transcription factors [My Copy] Science (New York, N.Y.), Vol. 324, No. 5935. (26 June 2009), pp. 1720-1723. by Gwenael Badis, Michael F. Berger, Anthony A. Philippakis, et al.Shaheynoor Talukder, Andrew R. Gehrke, Savina A. Jaeger, Esther T. Chan, Genita Metzler, Anastasia Vedenko, Xiaoyu Chen, Hanna Kuznetsov, Chi-Fong Wang, David Coburn, Daniel E. Newburger, Quaid Morris, Timothy R. Hughes, Martha L. Bulyk posted to dna_binding_specificity experimental mouse pbm tfbs transcription transcription_regulation by siebert on 2009-05-20 11:55:56 as along with 23 people and 1 group sebastien_vigneau nklee sconlan isimpson jbhiatt daforerog absterga mingzhi galka8_diploma fenghezi TRHvidsten ilyashl cambray rpatward tibbitts dpollard JustinCrocker burak aalibes dipenps roys emptyhb tmmurali RockmanLab
	Modeling dependencies in protein-DNA binding sites [My Copy] In RECOMB '03: Proceedings of the seventh annual international conference on Research in computational molecular biology (2003), pp. 28-37. by Yoseph Barash, Gal Elidan, Nir Friedman, Tommy Kaplan posted to bayesian_networks mixture_model pwm tfbs transcription transcription_regulation by siebert on 2009-05-14 14:45:39 as along with 1 person dquest
	Widespread bidirectional promoters are the major source of cryptic transcripts in yeast. [My Copy] Nature, Vol. 457, No. 7232. (19 February 2009), pp. 1038-1042. by Helen Neil, Christophe Malabat, Yves d'Aubenton-Carafa, Zhenyu Xu, Lars M. Steinmetz, Alain Jacquier posted to bidirectional_promoters cuts s_cerevisiae transcription transcription_initiation by siebert on 2009-04-09 14:20:44 as along with 7 people bartjacobse maximilianh jiezhou mtagaya djkt jbhiatt bpcusack
	Frequency-modulated nuclear localization bursts coordinate gene regulation. [My Copy] Nature, Vol. 455, No. 7212. (25 September 2008), pp. 485-490. by Long Cai, Chiraj K. Dalal, Michael B. Elowitz posted to coordination experimental localization regulation s_cerevisiae transcription transcription_regulation by siebert on 2009-04-07 09:22:05 as along with 8 people and 1 group bertelsen ellarond dpollard erel10 inesdesantiago raik caseybrown jjray RockmanLab
	Mammalian RNA polymerase II core promoters: insights from genome-wide studies. [My Copy] Nature reviews. Genetics, Vol. 8, No. 6. (08 June 2007), pp. 424-436. by Albin Sandelin, Piero Carninci, Boris Lenhard, Jasmina Ponjavic, Yoshihide Hayashizaki, David A. Hume posted to core_promoter_elements review rna_pol_ii transcription transcription_initiation by siebert on 2009-03-13 15:50:07 as along with 16 people and 3 groups inesdesantiago isimpson megraw guhjy tonamswish maximilianh rpatward Lauren_Jones agustinarce dchughes xiaobeizhao zwang cabbagezs cisevol GeeSharpMinor idonaldson G4ID Genetics-of-Gambling cis-regulatory-evolution
	The role of enhancers as centres for general transcription factor recruitment [My Copy] Trends in Biochemical Sciences, Vol. 30, No. 11. (November 2005), pp. 593-599. by H. Szutorisz, N. Dillon, L. Tora posted to enhancers review transcription transcription_initiation transcription_regulation by siebert on 2009-03-12 17:12:54 as along with 1 person raylim
	A transcription factor affinity based code for mammalian transcription initiation [My Copy] Genome Research, Vol. 19, No. 4. (13 April 2009), pp. 644-656. by Molly Megraw, Fernando Pereira, Shane T. T. Jensen, Uwe Ohler, Artemis G. G. Hatzigeorgiou posted to cage core_promoter_elements logistic_regression mammals mirna tfbs transcription transcription_initiation by siebert on 2009-03-11 10:08:01 as along with 9 people and 1 group heliopais guhjy tonamswish rpatward biozhang2001 absterga jbhiatt samgj daforerog microRNA
	Genome-wide RNA polymerase II: not genes only! [My Copy] Trends in Biochemical Sciences, Vol. 33, No. 6. (June 2008), pp. 265-273. by Frederic Koch, Frederic Jourquin, Pierre Ferrier, Jean-Christophe Andrau posted to pol_ii_enhancer_binding prpp review rna_pol_ii transcription transcription_elongation transcription_initiation transcription_regulation by siebert on 2009-03-09 14:38:42 as along with 1 person inesdesantiago
	Nucleosome positioning and gene regulation: advances through genomics [My Copy] Nature Reviews Genetics, Vol. 10, No. 3. (01 March 2009), pp. 161-172. by Cizhong Jiang, Franklin posted to chromatin histone_modification nfr nucleosome review transcription transcription_initiation transcription_regulation by siebert on 2009-02-19 13:10:30 as along with 13 people and 1 group tonamswish hagechouchin443 humburg talponer fenghezi inesdesantiago rpatward timflutre nilsbecker aalibes idonaldson WanderingAengus provero cube_and_beyond
	Transcriptional activation: mediator can act after preinitiation complex formation [My Copy] Molecular cell, Vol. 17, No. 6. (18 March 2005), pp. 752-754. by K. Struhl posted to mediator transcription transcription_initiation transcription_regulation by siebert on 2009-02-19 12:59:37 as
	Context-specific independence mixture modeling for positional weight matrices [My Copy] Bioinformatics, Vol. 22, No. 14. (15 July 2006), pp. e166-173. by Benjamin Georgi, Alexander Schliep posted to mixture_model pwm tfbs transcription transcription_regulation by siebert on 2009-02-03 09:59:38 as
	Diverse two-dimensional input functions control bacterial sugar genes [My Copy] Molecular cell, Vol. 29, No. 6. (28 March 2008), pp. 786-792. by S. Kaplan, A. Bren, A. Zaslaver, E. Dekel, U. Alon posted to dor e_coli hill_function regulation transcription transcription_regulation by siebert on 2009-01-20 15:26:00 as along with 3 people agonzale kentz kentsis
	Malleable machines in transcription regulation: the mediator complex [My Copy] PLoS computational biology, Vol. 4, No. 12. (December 2008) by A. Tóth-Petróczy, C. J. Oldfield, I. Simon, et al.Y. Takagi, A. K. Dunker, V. N. Uversky, M. Fuxreiter posted to disordered_regions idr mediator regulation transcription transcription_regulation by siebert on 2009-01-19 12:43:30 as along with 2 people akraemer chad_davis
	It's the sequence, stupid! [My Copy] Science, Vol. 322, No. 5900. (17 October 2008), pp. 380-381. by Hilary A. Coller, Leonid Kruglyak posted to h_sapiens mouse regulation transcription transcription_regulation by siebert on 2009-01-19 12:40:23 as along with 10 people and 4 groups GustavoLacerda Zephyrus cisevol isimpson dlobo bpcusack reyez djkt ptrobajo marck Roswell Cancer Crosstalk cis-regulatory-evolution BergmanLab GEB
	Divergent transcription from active promoters [My Copy] Science (New York, N.Y.), Vol. 322, No. 5909. (19 December 2008), pp. 1849-1851. by Amy C. Seila, Mauro J. Calabrese, Stuart S. Levine, et al.Gene W. Yeo, Peter B. Rahl, Ryan A. Flynn, Richard A. Young, Phillip A. Sharp posted to divergent_transcription mouse transcription transcription_initiation by siebert on 2009-01-19 12:37:43 as along with 16 people guhjy gdb fenghezi tonamswish emptyhb caseybrown sebastien_vigneau inesdesantiago djkt jjray strands Glires lp2 sandersl diaz0058 jbhiatt
	tCal: transcriptional probability calculator using thermodynamic model [My Copy] Bioinformatics, Vol. 24, No. 22. (15 November 2008), pp. 2639-2640. by Xin Zhou, Zhen Su posted to python rna_pol_ii statistical_mechanics thermodynamic_model transcription transcription_factors transcription_regulation by siebert on 2009-01-09 12:43:48 as along with 2 people and 1 group allPowerde behindtherabbit TranscriptionalRegulationWithThermodynamicModels
	Transcriptional regulation by the numbers: applications [My Copy] Current Opinion in Genetics & Development, Vol. 15, No. 2. (April 2005), pp. 125-135. by L. Bintu, N. E. Buchler, H. G. Garcia, et al.U. Gerland, T. Hwa, J. Kondev, T. Kuhlman, R. Phillips posted to rna_pol_ii statistical_mechanics thermodynamic_model transcription transcription_factors transcription_regulation by siebert on 2009-01-09 10:04:44 as along with 6 people and 1 group jjray imouthesmp dpollard madhadron dquest discreteonyxorb EisenLab
	On schemes of combinatorial transcription logic [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 9. (29 April 2003), pp. 5136-5141. by Nicolas E. Buchler, Ulrich Gerland, Terence Hwa posted to regulation regulatory_networks transcription transcription_factors transcription_logic transcription_regulation by siebert on 2008-12-10 14:12:24 as along with 6 people and 1 group akraemer dbikard jjray balajis olympos discreteonyxorb Synthetic Biology
	Transcriptional regulatory code of a eukaryotic genome [My Copy] Nature, Vol. 431, No. 7004. (02 September 2004), pp. 99-104. by Christopher T. Harbison, D. Benjamin Gordon, Tong I. Lee, et al.Nicola J. Rinaldi, Kenzie D. Macisaac, Timothy W. Danford, Nancy M. Hannett, Jean-Bosco Tagne, David B. Reynolds, Jane Yoo, Ezra G. Jennings, Julia Zeitlinger, Dmitry K. Pokholok, Manolis Kellis, P. Alex Rolfe, Ken T. Takusagawa, Eric S. Lander, David K. Gifford, Ernest Fraenkel, Richard A. Young posted to chip-on-chip s_cerevisiae transcription transcription_factors transcription_regulation by siebert on 2008-12-09 10:15:17 as along with 29 people and 8 groups viren4388 daveGerrard Dulce talponer wowalz alokm tuck lyongu kaspermunch dpollard balicea kt dchughes nirfriedman cmm nickluscombe kengg gespim koller lusk nklee cisevol njcitulike xili03 brant mariakmejia kristallreiner snow_dragon aalibes Bioinformatics EisenLab FAB-lab G4ID EBI-regulation Plantandetc Genetics-of-Gambling BergmanLab
	Transcriptional regulation by the numbers: models [My Copy] Current Opinion in Genetics & Development, Vol. 15, No. 2. (April 2005), pp. 116-124. by L. Bintu, N. E. Buchler, H. G. Garcia, et al.U. Gerland, T. Hwa, J. Kondev, R. Phillips posted to rna_pol_ii statistical_mechanics thermodynamic_model transcription transcription_factors transcription_regulation by siebert on 2008-11-13 16:54:55 as along with 5 people jjray imouthesmp madhadron dquest discreteonyxorb
	Perspectives on the RNA polymerase II core promoter [My Copy] Biochemical Society transactions, Vol. 34, No. Pt 6. (December 2006), pp. 1047-1050. by T. Juven-Gershon, J. Y. Hsu, J. T. Kadonaga posted to core core_promoter_elements promoter review rna_pol_ii transcription transcription_factors transcription_initiation by siebert on 2008-11-11 08:44:36 as
	Principles of transcriptional control in the metabolic network of Saccharomyces cerevisiae [My Copy] Nat Biotechnol, Vol. 22, No. 1. (January 2004), pp. 86-92. by J. Ihmels, R. Levy, N. Barkai posted to metabolic_network s_cerevisiae transcription transcription_modules transcription_regulation by siebert on 2008-08-28 12:07:39 as along with 7 people and 4 groups icases adepace nickluscombe koller arne shung hryk EisenLab EBI-regulation TNT dIEMoSIRIS
	Defining transcription modules using large-scale gene expression data [My Copy] Bioinformatics, Vol. 20, No. 13. (1 September 2004), pp. 1993-2003. by J. Ihmels, S. Bergmann, N. Barkai posted to clustering microarray_analysis microarrays s_cerevisiae transcription transcription_modules by siebert on 2008-08-27 15:03:32 as along with 5 people and 3 groups aviad_work marcius adepace natstreet tvdbulck EisenLab BioinfoCIPF SGU-CIPF
	Revealing modular organization in the Yeast transcriptional network [My Copy] Nat Genet, Vol. 31, No. 4. (August 2002), pp. 370-377. by J. Ihmels, G. Friedlander, S. Bergmann, O. Sarig, Y. Ziv, N. Barkai posted to clustering microarray_analysis microarrays s_cerevisiae transcription transcription_modules by siebert on 2008-08-26 14:39:08 as along with 5 people and 2 groups adepace nickluscombe natstreet karfunkel ellakat EisenLab EBI-regulation
	Transcriptional noise and the fidelity of initiation by RNA polymerase II [My Copy] Nature Structural & Molecular Biology, Vol. 14, No. 2., pp. 103-105. by Kevin Struhl posted to transcription transcriptional_noise transcription_initiation by siebert on 2008-08-04 12:24:49 as along with 4 people and 2 groups xingxu dchughes margaritis uz_labu_laimi G4ID Genetics-of-Gambling
	Mapping the strand-specific transcriptome of fission Yeast [My Copy] Nature Genetics, Vol. 40, No. 8., pp. 935-936. by Thomas R. Gingeras posted to hybmap s_pombe transcription transcriptome by siebert on 2008-08-01 15:08:08 as along with 1 person bpcusack
	Dynamic transcriptome of Schizosaccharomyces pombe shown by RNA-DNA hybrid mapping [My Copy] Nat Genet, Vol. 40, No. 8. (2008), pp. 977-986. by Natalie Dutrow, David A. Nix, Derick Holt, et al.Brett Milash, Brian Dalley, Erick Westbroek, Timothy J. Parnell, Bradley R. Cairns posted to experimental hybmap s_pombe transcription transcriptome by siebert on 2008-08-01 14:21:38 as along with 2 people jbhiatt caseybrown
	Histones face the FACT [My Copy] Science, Vol. 301, No. 5636. (22 August 2003), pp. 1053-1055. by Jesper Q. Svejstrup posted to fact nucleosome spt16 spt6 transcription transcription_elongation by siebert on 2008-07-30 17:16:36 as
	Repairing nucleosomes during transcription [My Copy] Nature structural biology, Vol. 10, No. 11. (November 2003), pp. 879-880. by M. J. Carrozza, T. Kusch, J. L. Workman posted to cryptic_promoters fact nucleosome spt16 spt6 transcription transcription_elongation by siebert on 2008-07-30 16:02:59 as
	Transcriptional regulatory networks in Saccharomyces cerevisiae [My Copy] Science, Vol. 298, No. 5594. (25 October 2002), pp. 799-804. by T. I. Lee, N. J. Rinaldi, F. Robert, et al.D. T. Odom, Z. Bar-Joseph, G. K. Gerber, N. M. Hannett, C. T. Harbison, C. M. Thompson, I. Simon, J. Zeitlinger, E. G. Jennings, H. L. Murray, D. B. Gordon, B. Ren, J. J. Wyrick, J. B. Tagne, T. L. Volkert, E. Fraenkel, D. K. Gifford, R. A. Young posted to chip-on-chip experimental regulation regulatory_networks s_cerevisiae transcription transcription_factors transcription_regulation by siebert on 2008-07-30 14:18:08 as along with 32 people and 2 groups viren4388 mjoach kmdaily kinop junehlee lillo80 camster snuppepuppan icases forluvoft ggrot alokm opheliav samal sameetmehta cconboy koller jguinney franklin timflutre jpoyatos lusk nklee karfunkel mimulus_99 roys njcitulike brant kristallreiner Borelli Takayuki dquest dbk-lab TNT
	Genetic reconstruction of a functional transcriptional regulatory network [My Copy] Nat Genet (8 April 2007) by Zhanzhi Hu, Patrick J. J. Killion, Vishwanath R. R. Iyer posted to experimental expression microarrays regulation regulatory_networks s_cerevisiae transcription transcription_regulation by siebert on 2008-07-30 14:13:28 as along with 15 people and 6 groups sergiun TheresaNiederberger akraemer behindtherabbit ptrobajo dpollard xico nickluscombe zwang lizabeth dejori xingxu naegele czeller mapplab Bioinformatics EisenLab WetBiology EBI-regulation ic4 generif_paper
	Gene regulation by transcription factors and microRNAs [My Copy] Science, Vol. 319, No. 5871. (28 March 2008), pp. 1785-1786. by Oliver Hobert posted to mirna regulation transcription transcription_factors transcription_regulation by siebert on 2008-07-24 13:12:21 as along with 14 people and 1 group tonamswish danaiancu megraw valeriehilgers guhjy inesdesantiago jfr ealloza zwang biomcgary heliopais emptyhb maralena bootsy microRNA
	Freedom of expression [My Copy] Science, Vol. 319, No. 5871. (28 March 2008), 1781. by Guy Riddihough, Beverly A. Purnell, John Travis posted to introduction regulation transcription by siebert on 2008-07-24 13:09:30 as along with 1 person maximilianh
	Predictive modeling of genome-wide mRNA expression: from modules to molecules [My Copy] Annu Rev Biophys Biomol Struct, Vol. 36 (2007), pp. 329-347. by H. J. Bussemaker, B. C. Foat, L. D. Ward posted to biophysical_models cis-regulatory_logic cis-regulatory_modules crm expression network_inference psam regulation regulatory_networks review transcription by siebert on 2008-07-23 14:40:38 as along with 2 people rdiaz guhjy
	A phylogenetic Gibbs sampler that yields centroid solutions for cis-regulatory site prediction [My Copy] Bioinformatics, Vol. 23, No. 14. (15 July 2007), pp. 1718-1727. by Lee A. A. Newberg, William A. A. Thompson, Sean Conlan, Thomas M. M. Smith, Lee, Charles E. E. Lawrence posted to cis-regulatory_modules crm ensemble_centroid felsenstein gibbs_sampler metropolis-hastings_algorithm phylogenetic_model regulation transcription by siebert on 2008-07-23 13:53:20 as along with 7 people and 1 group vingron operon Dulce Mehlhorn dpollard cjeans sconlan EisenLab
	Predicting expression patterns from regulatory sequence in Drosophila segmentation [My Copy] Nature, Vol. 451, No. 7178. (31 January 2008), pp. 535-540. by Eran Segal, Tali Raveh-Sadka, Mark Schroeder, Ulrich Unnerstall, Ulrike Gaul posted to cis-regulatory_modules cooperative_binding crm d_melanogaster expression hidden_markov_model hmm probabilistic_framework regulation transcription transcription_factors transcription_regulation by siebert on 2008-07-23 10:27:26 as along with 19 people and 2 groups TRHvidsten daveGerrard koller dlmace ptrobajo isimpson dakelley tmmurali eckart_bindewald djkt bootsy biomcgary idonaldson roys emptyhb pkharchenko meiklej jrest tresch BergmanLab TranscriptionalRegulationWithThermodynamicModels
	The transcriptional landscape of the Yeast genome defined by RNA sequencing [My Copy] Science (May 2008), 1158441. by Ugrappa Nagalakshmi, Zhong Wang, Karl Waern, et al.Chong Shou, Debasish Raha, Mark Gerstein, Michael Snyder posted to experimental rna-seq s_cerevisiae transcription transcriptome by siebert on 2008-07-23 09:38:42 as
	The Yeast mediator complex and its regulation [My Copy] Trends Biochem Sci, Vol. 30, No. 5. (May 2005), pp. 240-244. by S. Björklund, C. M. Gustafsson posted to mediator regulation review s_cerevisiae transcription by siebert on 2008-07-23 09:38:42 as
	Mediator comes of age [My Copy] Trends in Biochemical Sciences In MEDIATOR, Vol. 30, No. 5. (May 2005) by Roger D. Kornberg posted to introduction mediator transcription by siebert on 2008-07-23 09:38:42 as
	Mediator and the mechanism of transcriptional activation [My Copy] Trends Biochem Sci, Vol. 30, No. 5. (May 2005), pp. 235-239. by R. D. Kornberg posted to mediator regulation review transcription by siebert on 2008-07-23 09:38:42 as
	A probabilistic method to detect regulatory modules [My Copy] Bioinformatics, Vol. 19 Suppl 1 (2003) by S. Sinha, E. van Nimwegen, E. D. Siggia posted to binding_site_correlation cis-regulatory_modules crm cross_species probabilistic_framework regulation stubb transcription by siebert on 2008-07-23 09:38:42 as
	Computational detection of genomic cis-regulatory modules applied to body patterning in the early Drosophila embryo. [My Copy] BMC Bioinformatics, Vol. 3 (October 2002) by N. Rajewsky, M. Vergassola, U. Gaul, E. D. Siggia posted to ahab cis-regulatory_modules crm d_melanogaster regulation transcription by siebert on 2008-07-23 09:38:41 as
	Promoter activation when the ChIPs are down [My Copy] Nature Structural & Molecular Biology, Vol. 13, No. 2., pp. 96-97. by Brian A. Lewis, Danny Reinberg posted to chip-on-chip mediator s_cerevisiae transcription by siebert on 2008-07-23 09:38:41 as
	Activator-specific recruitment of Mediator in vivo [My Copy] Nature Structural & Molecular Biology, Vol. 13, No. 2. (January 2006), pp. 117-120. by Xiaochun Fan, Danny M. Chou, Kevin Struhl posted to chip-on-chip mediator s_cerevisiae transcription by siebert on 2008-07-23 09:38:41 as
	Power sequencing [My Copy] Nature, Vol. 453, No. 7199. (2008), pp. 1197-1198. by Brenton R. Graveley posted to methods rna-seq transcription transcriptome ultrahigh_throughput_sequencing by siebert on 2008-07-23 09:38:41 as
	Sequence census methods for functional genomics [My Copy] Nature Methods, Vol. 5, No. 1. (December 2007), pp. 19-21. by Barbara Wold, Richard M. Myers posted to methods review transcription transcriptome ultrahigh_throughput_sequencing by siebert on 2008-07-23 09:38:40 as
	The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Saccharomyces cerevisiae [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (January 2006) by M. C. Teixeira, P. Monteiro, P. Jain, et al.S. Tenreiro, A. R. Fernandes, N. P. Mira, M. Alenquer, A. T. Freitas, A. L. Oliveira, Sá I. Correia posted to database regulation s_cerevisiae transcription transcription_factors yeastract by siebert on 2008-07-23 09:38:40 as
	YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae [My Copy] Nucleic Acids Res (2007) by Pedro T. T. Monteiro, Nuno D. D. Mendes, Miguel C. C. Teixeira, et al.Sofia D'orey, Sandra Tenreiro, Nuno P. P. Mira, Hélio Pais, Alexandre P. P. Francisco, Alexandra M. M. Carvalho, Artur B. B. Lourenço, Isabel S. Correia, Arlindo L. L. Oliveira, Ana T. T. Freitas posted to database regulation s_cerevisiae transcription transcription_factors yeastract by siebert on 2008-07-23 09:38:40 as

Note: You may cite this page as: http://www.citeulike.org/user/siebert/tag/transcription

transcription	49
s_cerevisiae	26
transcription_regulation	24
regulation	20
review	15
transcription_factors	13
experimental	13
regulatory_networks	11
transcription_initiation	10
rna_pol_ii	8
expression	8
nucleosome	8
chip-on-chip	8
mediator	7
transcription_elongation	5
cis-regulatory_modules	5
transcriptome	5
tfbs	5
microarray_analysis	5
crm	5
dna_binding_specificity	5
networks	4
microarrays	4
thermodynamic_model	4
nucleosome_occupancy	4
mouse	4
network_inference	4
bayesian_networks	4
statistical_mechanics	3
transcription_modules	3
spt6	3
probabilistic_framework	3
mirna	3
e_coli	3
methods	3
r	3
nucleosome_map	3
programming	3
r_package	3
tiling_microarrays	3
core_promoter_elements	3
remote_homology_detection	2
cis-regulatory_logic	2
clustering	2
histone_modification	2
yeastract	2
introduction	2
hybmap	2
mixture_model	2
pbm	2
fact	2
pwm	2
cellular_networks	2
spt16	2
rna-seq	2
expression_variability	2
cooperative_binding	2
database	2
s_pombe	2
rate-limiting_control	2
h_sapiens	2
d_melanogaster	2
neural_networks	2
nfr	2
ultrahigh_throughput_sequencing	2
cryptic_promoters	2
rna_pol_ii_stalling	2
chromatin	2
gibbs_sampler	1
multi-kernel_learning	1
sampling	1
expression_profiler	1
ensemble_centroid	1
stubb	1
developmental	1
microarray_quality	1
flo8	1
artificial_networks	1
eqtl	1
secondary_structure_prediction	1
subcircuits	1
dor	1
yeast	1
bayesian_regression	1
lstm	1
cage	1
stochastic_algorithms	1
encode	1
gene_oscillator	1
gui	1
compression	1
divergent_transcription	1
protein_dna_interaction	1
psipred	1
core	1
coordination	1
promoter	1
deconvolution	1
prpp	1
ahab	1
synthetic_promoters	1
hidden_markov_model	1
c_albicans	1
metropolis-hastings_algorithm	1
binding_site_correlation	1
phenotypic_activation	1
normalization	1
pssm	1
hmm	1
overexpression	1
protein_fold_recognition	1
application	1
mcmc	1
cuts	1
biojava	1
scholar_factor	1
ncrna	1
cross_species	1
biophysical_models	1
python	1
protein_protein_interaction	1
logistic_regression	1
felsenstein	1
pol_ii_enhancer_binding	1
genetic_networks	1
mammals	1
promoter-proximal_pausing	1
idr	1
psi-blast	1
bidirectional_promoters	1
hierarchical_networks	1
psam	1
disordered_regions	1
transcription_logic	1
probabilistic_graphical_models	1
phylogenetic_model	1
multi-class_learning	1
transcriptional_noise	1
long_short-term_memory	1
synthetic_biology	1
analysis	1
evolution	1
enhancers	1
genome	1
localization	1
open_id	1
research_id	1
protocol	1
markov_chain_monte_carlo	1
metabolic_network	1
api	1
statistical_positioning	1
parallel	1
hill_function	1
co-regulation	1

siebert's transcription [49 articles] Export

siebert's tags