siebert's transcription_initiation [10 articles] Export Sort

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	Widespread bidirectional promoters are the major source of cryptic transcripts in yeast. [My Copy] Nature, Vol. 457, No. 7232. (19 February 2009), pp. 1038-1042. by Helen Neil, Christophe Malabat, Yves d'Aubenton-Carafa, Zhenyu Xu, Lars M. Steinmetz, Alain Jacquier posted to bidirectional_promoters cuts s_cerevisiae transcription transcription_initiation by siebert on 2009-04-09 14:20:44 as along with 8 people oannes bartjacobse maximilianh jiezhou mtagaya djkt jbhiatt bpcusack
	Mammalian RNA polymerase II core promoters: insights from genome-wide studies. [My Copy] Nature reviews. Genetics, Vol. 8, No. 6. (08 June 2007), pp. 424-436. by Albin Sandelin, Piero Carninci, Boris Lenhard, Jasmina Ponjavic, Yoshihide Hayashizaki, David A. Hume posted to core_promoter_elements review rna_pol_ii transcription transcription_initiation by siebert on 2009-03-13 15:50:07 as along with 16 people and 3 groups inesdesantiago isimpson megraw guhjy tonamswish maximilianh rpatward Lauren_Jones agustinarce dchughes xiaobeizhao zwang cabbagezs cisevol GeeSharpMinor idonaldson G4ID Genetics-of-Gambling cis-regulatory-evolution
	The role of enhancers as centres for general transcription factor recruitment [My Copy] Trends in Biochemical Sciences, Vol. 30, No. 11. (November 2005), pp. 593-599. by H. Szutorisz, N. Dillon, L. Tora posted to enhancers review transcription transcription_initiation transcription_regulation by siebert on 2009-03-12 17:12:54 as along with 1 person raylim
	A transcription factor affinity based code for mammalian transcription initiation [My Copy] Genome Research, Vol. 19, No. 4. (13 April 2009), pp. 644-656. by Molly Megraw, Fernando Pereira, Shane T. T. Jensen, Uwe Ohler, Artemis G. G. Hatzigeorgiou posted to cage core_promoter_elements logistic_regression mammals mirna tfbs transcription transcription_initiation by siebert on 2009-03-11 10:08:01 as along with 9 people and 1 group heliopais guhjy tonamswish rpatward biozhang2001 absterga jbhiatt samgj daforerog microRNA
	Genome-wide RNA polymerase II: not genes only! [My Copy] Trends in Biochemical Sciences, Vol. 33, No. 6. (June 2008), pp. 265-273. by Frederic Koch, Frederic Jourquin, Pierre Ferrier, Jean-Christophe Andrau posted to pol_ii_enhancer_binding prpp review rna_pol_ii transcription transcription_elongation transcription_initiation transcription_regulation by siebert on 2009-03-09 14:38:42 as along with 1 person inesdesantiago
	Nucleosome positioning and gene regulation: advances through genomics [My Copy] Nature Reviews Genetics, Vol. 10, No. 3. (01 March 2009), pp. 161-172. by Cizhong Jiang, Franklin posted to chromatin histone_modification nfr nucleosome review transcription transcription_initiation transcription_regulation by siebert on 2009-02-19 13:10:30 as along with 13 people and 1 group tonamswish hagechouchin443 humburg talponer fenghezi inesdesantiago rpatward timflutre nilsbecker aalibes idonaldson WanderingAengus provero cube_and_beyond
	Transcriptional activation: mediator can act after preinitiation complex formation [My Copy] Molecular cell, Vol. 17, No. 6. (18 March 2005), pp. 752-754. by K. Struhl posted to mediator transcription transcription_initiation transcription_regulation by siebert on 2009-02-19 12:59:37 as
	Divergent transcription from active promoters [My Copy] Science (New York, N.Y.), Vol. 322, No. 5909. (19 December 2008), pp. 1849-1851. by Amy C. Seila, Mauro J. Calabrese, Stuart S. Levine, et al.Gene W. Yeo, Peter B. Rahl, Ryan A. Flynn, Richard A. Young, Phillip A. Sharp posted to divergent_transcription mouse transcription transcription_initiation by siebert on 2009-01-19 12:37:43 as along with 16 people guhjy gdb fenghezi tonamswish emptyhb caseybrown sebastien_vigneau inesdesantiago djkt jjray strands Glires lp2 sandersl diaz0058 jbhiatt
	Perspectives on the RNA polymerase II core promoter [My Copy] Biochemical Society transactions, Vol. 34, No. Pt 6. (December 2006), pp. 1047-1050. by T. Juven-Gershon, J. Y. Hsu, J. T. Kadonaga posted to core core_promoter_elements promoter review rna_pol_ii transcription transcription_factors transcription_initiation by siebert on 2008-11-11 08:44:36 as
	Transcriptional noise and the fidelity of initiation by RNA polymerase II [My Copy] Nature Structural & Molecular Biology, Vol. 14, No. 2., pp. 103-105. by Kevin Struhl posted to transcription transcriptional_noise transcription_initiation by siebert on 2008-08-04 12:24:49 as along with 4 people and 2 groups xingxu dchughes margaritis uz_labu_laimi G4ID Genetics-of-Gambling

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transcription	49
s_cerevisiae	26
transcription_regulation	24
regulation	20
review	15
transcription_factors	13
experimental	13
regulatory_networks	11
transcription_initiation	10
rna_pol_ii	8
expression	8
nucleosome	8
chip-on-chip	8
mediator	7
transcription_elongation	5
cis-regulatory_modules	5
transcriptome	5
tfbs	5
microarray_analysis	5
crm	5
dna_binding_specificity	5
networks	4
microarrays	4
thermodynamic_model	4
nucleosome_occupancy	4
mouse	4
network_inference	4
bayesian_networks	4
statistical_mechanics	3
transcription_modules	3
spt6	3
probabilistic_framework	3
mirna	3
e_coli	3
methods	3
r	3
nucleosome_map	3
programming	3
r_package	3
tiling_microarrays	3
core_promoter_elements	3
remote_homology_detection	2
cis-regulatory_logic	2
clustering	2
histone_modification	2
yeastract	2
introduction	2
hybmap	2
mixture_model	2
pbm	2
fact	2
pwm	2
cellular_networks	2
spt16	2
rna-seq	2
expression_variability	2
cooperative_binding	2
database	2
s_pombe	2
rate-limiting_control	2
h_sapiens	2
d_melanogaster	2
neural_networks	2
nfr	2
ultrahigh_throughput_sequencing	2
cryptic_promoters	2
rna_pol_ii_stalling	2
chromatin	2
gibbs_sampler	1
multi-kernel_learning	1
sampling	1
expression_profiler	1
ensemble_centroid	1
stubb	1
developmental	1
microarray_quality	1
flo8	1
artificial_networks	1
eqtl	1
secondary_structure_prediction	1
subcircuits	1
dor	1
yeast	1
bayesian_regression	1
lstm	1
cage	1
stochastic_algorithms	1
encode	1
gene_oscillator	1
gui	1
compression	1
divergent_transcription	1
protein_dna_interaction	1
psipred	1
core	1
coordination	1
promoter	1
deconvolution	1
prpp	1
ahab	1
synthetic_promoters	1
hidden_markov_model	1
c_albicans	1
metropolis-hastings_algorithm	1
binding_site_correlation	1
phenotypic_activation	1
normalization	1
pssm	1
hmm	1
overexpression	1
protein_fold_recognition	1
application	1
mcmc	1
cuts	1
biojava	1
scholar_factor	1
ncrna	1
cross_species	1
biophysical_models	1
python	1
protein_protein_interaction	1
logistic_regression	1
felsenstein	1
pol_ii_enhancer_binding	1
genetic_networks	1
mammals	1
promoter-proximal_pausing	1
idr	1
psi-blast	1
bidirectional_promoters	1
hierarchical_networks	1
psam	1
disordered_regions	1
transcription_logic	1
probabilistic_graphical_models	1
phylogenetic_model	1
multi-class_learning	1
transcriptional_noise	1
long_short-term_memory	1
synthetic_biology	1
analysis	1
evolution	1
enhancers	1
genome	1
localization	1
open_id	1
research_id	1
protocol	1
markov_chain_monte_carlo	1
metabolic_network	1
api	1
statistical_positioning	1
parallel	1
hill_function	1
co-regulation	1

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