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	Dynamic Monte Carlo Simulation on the Polymer Chain with One End Grafted on a Flat Surface [My Copy] Macromolecular Theory and Simulations, Vol. 10, No. 4. (2001), pp. 339-342. by Jianhua Huang, Wenhua Jiang, Shijun Han posted to grafted by sikorski on 2006-10-16 09:28:02 as
	Protein folding theory: from lattice to all-atom models. [My Copy] Annu Rev Biophys Biomol Struct, Vol. 30 (2001), pp. 361-396. by L. Mirny, E. Shakhnovich posted to no-tag by sikorski on 2006-09-29 11:10:03 as along with 1 person bpb
	Monte Carlo studies on equilibrium globular protein folding. III. The four helix bundle. [My Copy] Biopolymers, Vol. 28 (1989), pp. 1097-1113. by A. Sikorski, J. Skolnick posted to no-tag by sikorski on 2006-09-29 10:54:48 as
	PROTEIN FOLDING THEORY: From Lattice to All-Atom Models - Annual Review of Biophysics and Biomolecular Structure, 30(1):361 - Abstract [My Copy] posted to no-tag by sikorski on 2006-09-29 09:30:51 as
	Caging helps proteins fold [My Copy] PNAS, Vol. 100, No. 20. (30 September 2003), pp. 11195-11197. by D. Thirumalai, Dmitri K. Klimov, George H. Lorimer posted to no-tag by sikorski on 2006-09-29 09:24:57 as
	Molecular crowding enhances native state stability and refolding rates of globular proteins [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 13. (29 March 2005), pp. 4753-4758. by Margaret S. Cheung, Dmitri Klimov, D. Thirumalai posted to no-tag by sikorski on 2006-09-29 09:21:50 as along with 2 people ras cactus
	Ribosome exit tunnel can entropically stabilize alpha-helices [My Copy] PNAS, Vol. 102, No. 52. (27 December 2005), pp. 18956-18961. by Guy Ziv, Gilad Haran, D. Thirumalai posted to no-tag by sikorski on 2006-09-29 09:17:20 as along with 1 person shuns
	Nanopore-Protein Interactions Dramatically Alter Stability and Yield of the Native State in Restricted Spaces, Journal of Molecular Biology, Vol: 357, Issue: 2 [My Copy] posted to no-tag by sikorski on 2006-09-29 09:09:26 as
	The shape of a flexible polymer in a cylindrical pore [My Copy] The Journal of Chemical Physics, Vol. 122, No. 19. (2005) by G. Morrison, D. Thirumalai posted to no-tag by sikorski on 2006-09-29 09:06:03 as along with 1 person choonpeng
	A Monte Carlo study of properties of protein-like heteropolymers [My Copy] Physica A: Statistical Mechanics and its Applications, Vol. 273, No. 1-2. (1 November 1999), pp. 190-197. by Piotr Romiszowski, Andrzej Sikorski posted to no-tag by sikorski on 2006-09-28 18:13:23 as
	Polymer principles and protein folding [My Copy] Protein Sci, Vol. 8, No. 6. (1 June 1999), pp. 1166-1180. by Ka Dill posted to no-tag by sikorski on 2006-09-28 18:11:24 as along with 1 person doktornoe
	Synthetic model for two-stranded alpha-helical coiled-coils. Design, synthesis, and characterization of an 86-residue analog of tropomyosin [My Copy] J. Biol. Chem., Vol. 256, No. 3. (10 February 1981), pp. 1214-1224. by Rs Hodges, Ak Saund, Pc Chong, St, Re Reid posted to no-tag by sikorski on 2006-09-28 18:09:16 as
	Engineering of Stable and Fast-Folding Sequences of Model Proteins [My Copy] PNAS, Vol. 90, No. 15. (1 August 1993), pp. 7195-7199. by Ei Shakhnovich, Am Gutin posted to no-tag by sikorski on 2006-09-28 18:07:38 as
	Monte Carlo Simulation of Equilibrium Globular Protein Folding: alpha -Helical Bundles with Long Loops [My Copy] PNAS, Vol. 86, No. 8. (15 April 1989), pp. 2668-2672. by Andrzej Sikorski, Jeffrey Skolnick posted to no-tag by sikorski on 2006-09-28 18:06:17 as
	The effect of sequence patterns and local conformational preferences on the structure of collapsed polypeptide [My Copy] Biopolymers, Vol. 54, No. 4. (2000), pp. 262-272. by Piotr Romiszowski, Andrzej Sikorski posted to no-tag by sikorski on 2006-09-28 18:03:52 as
	Collapse transitions in protein-like lattice polymers: The effect of sequence patterns [My Copy] Biopolymers, Vol. 42, No. 5. (1997), pp. 537-548. by Andrzej Kolinski, Pawel Madziar posted to no-tag by sikorski on 2006-09-28 18:02:29 as
	Properties of Star-Branched Polymer Chains. Application of the Replica Exchange Monte Carlo Method [My Copy] Macromolecules, Vol. 35, No. 18. (27 August 2002), pp. 7132-7137. by A. Sikorski posted to no-tag by sikorski on 2006-09-28 18:00:55 as
	Equilibrium thermodynamics of homopolymers and clusters: Molecular dynamics and Monte Carlo simulations of systems with square-well interactions [My Copy] The Journal of Chemical Physics, Vol. 107, No. 24. (1997), pp. 10691-10708. by Yaoqi Zhou, Martin Karplus, John M. Wichert, Carol K. Hall posted to no-tag by sikorski on 2006-09-28 17:57:06 as
	Finite chain length effects on the coil--globule transition of stiff-chain macromolecules: A Monte Carlo simulation [My Copy] The Journal of Chemical Physics, Vol. 109, No. 13. (1998), pp. 5659-5669. by V. A. Ivanov, W. Paul, K. Binder posted to no-tag by sikorski on 2006-09-28 17:56:09 as
	The effect of chain stiffness on the phase behaviour of isolated homopolymers [My Copy] The Journal of Chemical Physics, Vol. 108, No. 5. (1998), pp. 2134-2142. by Jonathan P. K. Doye, Richard P. Sear, Daan Frenkel posted to no-tag by sikorski on 2006-09-28 17:55:00 as
	On the conformational structure of a stiff homopolymer [My Copy] The Journal of Chemical Physics, Vol. 111, No. 8. (1999), pp. 3744-3752. by Y. A. Kuznetsov, E. G. Timoshenko posted to no-tag by sikorski on 2006-09-28 17:53:45 as
	Kinetics at the collapse transition of homopolymers and random copolymers [My Copy] The Journal of Chemical Physics, Vol. 103, No. 11. (1995), pp. 4807-4818. by Y. A. Kuznetsov, E. G. Timoshenko, K. A. Dawson posted to no-tag by sikorski on 2006-09-28 17:52:42 as
	Markov chain Monte Carlo maximum likelihood. [My Copy] In Computing Science and Statistics: Proceedings of 23rd Symposium on the Interface Interface Foundation (1991), pp. 156-163. by C. J. Geyer posted to no-tag by sikorski on 2006-09-28 17:33:01 as along with 1 person dgront
	Thermodynamical properties of simple models of protein-like heteropolymers. [My Copy] Biopolymers, Vol. 69, No. 3. (July 2003), pp. 391-398. by A. Sikorski, P. Romiszowski posted to no-tag by sikorski on 2006-09-28 17:32:55 as along with 1 person dgront
	Replica Monte Carlo Simulation of Spin-Glasses [My Copy] Physical Review Letters, Vol. 57, No. 21. (24 November 1986), 2607. by Robert H. Swendsen, Jian-Sheng Wang posted to no-tag by sikorski on 2006-09-28 17:32:05 as along with 6 people mijam Sylvain_Prigent dgront rabio qwermish iantunbridge
	Optimal allocation of replicas in parallel tempering simulations. [My Copy] J Chem Phys, Vol. 122, No. 2. (8 January 2005) by N. Rathore, M. Chopra, J. J. de Pablo posted to no-tag by sikorski on 2006-09-28 17:23:11 as along with 2 people baaden dgront
	Optimized Monte Carlo data analysis [My Copy] Physical Review Letters, Vol. 63, No. 12. (1989), 1195. by Alan M. Ferrenberg, Robert H. Swendsen posted to no-tag by sikorski on 2006-09-28 17:21:34 as along with 5 people and 1 group A_Coletta_Thesis dgront Akimasa chuan137 rulix Structural Biology Group TorVergata
	A new combination of replica exchange Monte Carlo and histogram analysis for protein folding and thermodynamics [My Copy] The Journal of Chemical Physics, Vol. 115, No. 3. (2001), pp. 1569-1574. by Dominik Gront, Andrzej Kolinski, Jeffrey Skolnick posted to no-tag by sikorski on 2006-09-28 15:51:19 as along with 3 people mcbla dgront rabio
	The weighted histogram analysis method for free-energy calculations on biomolecules. I. The method [My Copy] Journal of Computational Chemistry, Vol. 13, No. 8. (1992), pp. 1011-1021. by Shankar Kumar, John M. Rosenberg, Djamal Bouzida, Robert H. Swendsen, Peter A. Kollman posted to no-tag by sikorski on 2006-09-28 15:42:26 as along with 11 people and 1 group jrperillaj edws Diego_Prada stephenbond dfgreen A_Coletta_Thesis sunnytov dgront jwagoner bransfop allmensch Structural Biology Group TorVergata
	Comparison of three Monte Carlo conformational search strategies for a proteinlike homopolymer model: Folding thermodynamics and identification of low-energy structures [My Copy] The Journal of Chemical Physics, Vol. 113, No. 12. (2000), pp. 5065-5071. by Dominik Gront, Andrzej Kolinski, Jeffrey Skolnick posted to no-tag by sikorski on 2006-09-28 15:40:45 as along with 3 people mijam dgront rabio
	Principles of protein folding -- A perspective from simple exact models [My Copy] Protein Sci, Vol. 4, No. 4. (1 April 1995), pp. 561-602. by K. A. Dill, S. Bromberg, K. Yue, et al.K. M. Fiebig, D. P. Yee, P. D. Thomas, H. S. Chan posted to no-tag by sikorski on 2006-09-28 15:31:33 as along with 1 person iantunbridge
	Lattice Models of Protein Folding, Dynamics and Thermodynamics [My Copy] (1996) by A. Kolinski, J. Skolnick posted to no-tag by sikorski on 2006-09-29 10:51:44 as along with 1 person dgront

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