singhsh's microscopy [60 articles] Export

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	Advances in light microscopy for neuroscience. [My Copy] Annual review of neuroscience, Vol. 32, No. 1. (2009), pp. 435-506. by Brian A. Wilt, Laurie D. Burns, Eric Tatt T. Wei Ho, Kunal K. Ghosh, Eran A. Mukamel, Mark J. Schnitzer posted to review neuroscience microscopy by singhsh on 2009-11-06 14:49:51 as along with 1 person and 1 group samjlord moernerlab
	Statistical Inference of Biological Structure and Point Spread Functions in 3D Microscopy [My Copy] 3D Data Processing, Visualization, and Transmission, Third International Symposium on In 3DPVT '06: Proceedings of the Third International Symposium on 3D Data Processing, Visualization, and Transmission (3DPVT'06) (23 April 2006), pp. 373-380. by Joseph Schlecht, Kobus Barnard, Barry Pryor posted to psf microscopy inference by singhsh on 2009-10-19 20:28:55 as
	Second-harmonic imaging microscopy for visualizing biomolecular arrays in cells, tissues and organisms [My Copy] Nat Biotech, Vol. 21, No. 11. (November 2003), pp. 1356-1360. by Paul J. Campagnola, Leslie M. Loew posted to collagen fluorescence microscopy by singhsh on 2009-03-30 17:34:05 as along with 2 people anonymouspage loison
	Multiclass cell detection in bright field images of cell mixtures with ECOC probability estimation [My Copy] Image and Vision Computing, Vol. 26, No. 4. (01 April 2008), pp. 578-591. by X. Long, W. Cleveland, Y. Yao posted to cell classification microscopy by singhsh on 2009-03-29 04:47:20 as
	Efficient automated method for image-based classification of microbial cells [My Copy] Pattern Recognition, 2008. ICPR 2008. 19th International Conference on In Pattern Recognition, 2008. ICPR 2008. 19th International Conference on (2008), pp. 1-4. by P. Ruusuvuori, J. Seppala, T. Erkkila, A. Lehmussola, J. A. Puhakka, O. Yli-Harja posted to cell classification microscopy by singhsh on 2009-03-29 04:37:03 as
	Automatic joint classification and segmentation of whole cell 3D images [My Copy] Pattern Recognition, Vol. 42, No. 6. (June 2009), pp. 1067-1079. by Rajesh Narasimha, Hua Ouyang, Alexander Gray, Steven W. Mclaughlin, Sriram Subramaniam posted to cell classification microscopy by singhsh on 2009-03-29 04:36:03 as
	Automated Segmentation and Classification of High Throughput Yeast Assay Spots [My Copy] Medical Imaging, IEEE Transactions on In Medical Imaging, IEEE Transactions on, Vol. 26, No. 10. (2007), pp. 1401-1411. by K. Jafari-Khouzani, H. Soltanian-Zadeh, F. Fotouhi, J. R. Parrish, R. L. Finley posted to cell classification microscopy by singhsh on 2009-03-29 04:35:34 as
	Automatic recognition of biological particles in microscopic images [My Copy] Pattern Recognition Letters, Vol. 28, No. 1. (01 January 2007), pp. 31-39. by M. Ranzato, P. Taylor, J. House, R. Flagan, Y. Lecun, P. Perona posted to biology classification microscopy by singhsh on 2009-03-29 04:22:30 as
	Imaging through automation [My Copy] Nature Methods, Vol. 6, No. 1. (17 December 2008), pp. 34-34. by Daniel Evanko posted to bioimage biology imaging microscopy by singhsh on 2009-03-23 15:25:34 as
	Optical imaging in thick samples [My Copy] Nature Methods, Vol. 6, No. 1. (17 December 2008), pp. 35-35. by Natalie de Souza posted to bioimage biology fluorescence imaging microscopy by singhsh on 2009-03-23 15:23:00 as
	A quantitative spatiotemporal atlas of gene expression in the Drosophila blastoderm. [My Copy] Cell, Vol. 133, No. 2. (18 April 2008), pp. 364-374. by C. C. Fowlkes, C. L. Hendriks, S. V. Keränen, et al.G. H. Weber, O. Rübel, M. Y. Huang, S. Chatoor, A. H. DePace, L. Simirenko, C. Henriquez, A. Beaton, R. Weiszmann, S. Celniker, B. Hamann, D. W. Knowles, M. D. Biggin, M. B. Eisen, J. Malik posted to cell imaging microscopy quantitative by singhsh on 2009-03-08 23:34:38 as along with 4 people inesdesantiago Doug adepace cite0000
	3D morphology and gene expression in the Drosophila blastoderm at cellular resolution I: data acquisition pipeline [My Copy] Genome Biology, Vol. 7 (21 December 2006), R123. by Cris, Soile V. E. Keranen, Charless C. Fowlkes, et al.Lisa Simirenko, Gunther H. Weber, Angela H. Depace, Clara Henriquez, David W. Kaszuba, Bernd Hamann, Michael B. Eisen, Jitendra Malik, Damir Sudar, Mark D. Biggin, David W. Knowles posted to cell imaging microscopy morphology by singhsh on 2009-03-08 23:32:50 as along with 3 people and 2 groups daveGerrard dlmace indigoviolet BergmanLab EisenLab
	Something to see [My Copy] Nature, Vol. 443, No. 7114. (25 October 2006), pp. 1017-1021. by Michael Eisenstein posted to imaging microscopy by singhsh on 2009-03-02 23:06:33 as
	Automatic segmentation of digital micrographs: a survey. [My Copy] Studies in health technology and informatics, Vol. 107, No. Pt 2. (2004), pp. 847-851. by T. W. Nattkemper posted to cell microscopy segmentation by singhsh on 2009-01-17 16:32:15 as
	Imaging and detection: focusing on software [My Copy] Nature Methods, Vol. 5, No. 7., pp. 651-658. by Kelly R. Chi posted to imaging microscopy by singhsh on 2009-01-16 00:34:12 as
	Deformation-based nonlinear dimension reduction: Applications to nuclear morphometry [My Copy] Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on In Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on (2008), pp. 500-503. by G. K. Rohde, Wei Wang, Tao Peng, R. F. Murphy posted to cell microscopy shape by singhsh on 2009-01-13 17:29:35 as
	Robust statistical models for cell image interpretation [My Copy] Image and Vision Computing, Vol. 15, No. 4. (April 1997), pp. 307-316. by P. Zhou posted to cell classification microscopy by singhsh on 2009-01-12 21:26:29 as
	Efficient cell segmentation tool for confocal microscopy tissue images and quantitative evaluation of FISH signals [My Copy] Microscopy Research and Technique, Vol. 44, No. 1. (1999), pp. 49-68. by Umesh P. S. Adiga, B. B. Chaudhuri posted to cell confocal microscopy segmentation by singhsh on 2009-01-12 21:19:02 as
	Deformation-based nuclear morphometry: Capturing nuclear shape variation in HeLa cells [My Copy] Cytometry Part A, Vol. 73A, No. 4. (2008), pp. 341-350. by Gustavo K. Rohde, Alexandre J. S. Ribeiro, Kris N. Dahl, Robert F. Murphy posted to cell microscopy shape by singhsh on 2009-01-11 21:08:43 as
	Measuring Spatiotemporal Dependencies in Bivariate Temporal Random Sets with Applications to Cell Biology [My Copy] Pattern Analysis and Machine Intelligence, IEEE Transactions on In Pattern Analysis and Machine Intelligence, IEEE Transactions on, Vol. 30, No. 9. (2008), pp. 1659-1671. by E. Diaz, R. Sebastian, G. Ayala, et al.M. E. Diaz, R. Zoncu, D. Toomre, S. Gasman posted to cell microscopy spatio-temporal by singhsh on 2008-12-12 18:39:16 as
	Synthetic Images of High-Throughput Microscopy for Validation of Image Analysis Methods [My Copy] Proceedings of the IEEE In Proceedings of the IEEE, Vol. 96, No. 8. (16 July 2008), pp. 1348-1360. by A. Lehmussola, P. Ruusuvuori, J. Selinummi, T. Rajala, O. Yli-Harja posted to microscopy synthesis by singhsh on 2008-12-12 18:38:35 as
	Nonrigid Registration of 3-D Multichannel Microscopy Images of Cell Nuclei [My Copy] Image Processing, IEEE Transactions on In Image Processing, IEEE Transactions on, Vol. 17, No. 4. (2008), pp. 493-499. by Siwei Yang, D. Kohler, K. Teller, et al.T. Cremer, P. Le Baccon, E. Heard, R. Eils, K. Rohr posted to cell microscopy registration by singhsh on 2008-12-12 18:36:42 as
	Segmentation of Whole Cells and Cell Nuclei From 3-D Optical Microscope Images Using Dynamic Programming [My Copy] Medical Imaging, IEEE Transactions on In Medical Imaging, IEEE Transactions on, Vol. 27, No. 5. (2008), pp. 723-734. by D. P. Mccullough, P. R. Gudla, B. S. Harris, et al.J. A. Collins, K. J. Meaburn, M. A. Nakaya, T. P. Yamaguchi, T. Misteli, S. J. Lockett posted to cell microscopy segmentation by singhsh on 2008-12-12 18:32:07 as
	Image-based multivariate profiling of drug responses from single cells [My Copy] Nature Methods, Vol. 4, No. 5. (01 April 2007), pp. 445-453. by Lit-Hsin Loo, Lani F. Wu, Steven J. Altschuler posted to image-cytometry microscopy by singhsh on 2008-12-10 19:36:29 as along with 3 people and 1 group julius balabu dlmace SysbioMPI-TCells
	CellProfiler: image analysis software for identifying and quantifying cell phenotypes [My Copy] Genome Biology, Vol. 7 (31 October 2006), R100. by Anne E. Carpenter, Thouis R. Jones, Michael R. Lamprecht, et al.Colin Clarke, In H. Kang, Ola Friman, David A. Guertin, Joo H. Chang, Robert A. Lindquist, Jason Moffat, Polina Golland, David M. Sabatini posted to cell image microscopy segmentation by singhsh on 2008-12-10 18:43:06 as along with 7 people and 1 group module mmcclean SauloBortolon smini AnzaA dlmace ajaymalik TELEPAT-ES
	Imaging in Systems Biology [My Copy] Cell, Vol. 130, No. 5. (07 September 2007), pp. 784-795. by S. Megason, S. Fraser posted to biology image microscopy by singhsh on 2008-12-10 18:40:35 as along with 4 people abhishek_tiwari lechristophe adepace guhjy
	Automated segmentation, classification, and tracking of cancer cell nuclei in time-lapse microscopy. [My Copy] IEEE Trans Biomed Eng, Vol. 53, No. 4. (April 2006), pp. 762-766. by X. Chen, X. Zhou, S. T. Wong posted to cancer cell microscopy segmentation tracking by singhsh on 2008-12-08 21:44:49 as along with 1 person dwf
	Impact of image segmentation on high-content screening data quality for SK-BR-3 cells [My Copy] BMC Bioinformatics, Vol. 8 (14 September 2007), 340. by Andrew A. Hill, Peter Lapan, Yizheng Li, Steve Haney posted to cell microscopy segmentation validation by singhsh on 2008-12-04 17:36:01 as
	Automated local bright feature image analysis of nuclear protein distribution identifies changes in tissue phenotype. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 12. (21 March 2006), pp. 4445-4450. by D. W. Knowles, D. Sudar, C. Bator-Kelly, M. J. Bissell, S. A. Lelièvre posted to microscopy radial-profile by singhsh on 2008-11-10 22:29:31 as
	Rao-Blackwellized Marginal Particle Filtering for Multiple Object Tracking in Molecular Bioimaging [My Copy] Information Processing in Medical Imaging (2007), pp. 110-121. by Ihor Smal, Katharina Draegestein, Niels Galjart, Wiro Niessen, Erik Meijering posted to ipmi microscopy by singhsh on 2008-11-07 20:28:41 as along with 1 person proditus
	Active microscopic cellular image annotation by superposable graph transduction with imbalanced labels [My Copy] Computer Vision and Pattern Recognition, 2008. CVPR 2008. IEEE Conference on In Computer Vision and Pattern Recognition, 2008. CVPR 2008. IEEE Conference on (2008), pp. 1-8. by Jun Wang, Shih-Fu Chang, Xiaobo Zhou, S. Wong posted to cell fluorescence microscopy segmentation by singhsh on 2008-10-21 16:30:04 as along with 1 group Tumor Microenvironment @ OSU
	Computational processing and analysis of dynamic fluorescence image data. [My Copy] Methods in cell biology, Vol. 85 (2008), pp. 497-538. by J. F. Dorn, G. Danuser, G. Yang posted to fluorescence image microscopy by singhsh on 2008-10-19 15:52:20 as along with 1 person lechristophe
	Constraint factor graph cutbased active contour method for automated cellular image segmentation in RNAi screening [My Copy] Journal of Microscopy, Vol. 230, No. 2. (May 2008), pp. 177-191. by C. Chen, H. Li, X. Zhou, S. T. C. Wong posted to cell microscopy segmentation by singhsh on 2008-07-28 16:42:25 as along with 1 person guhjy
	NOVEL CELL SEGMENTATION AND ONLINE LEARNING ALGORITHMS FOR CELL PHASE IDENTIFICATION IN AUTOMATED TIME-LAPSE MICROSCOPY [My Copy] Biomedical Imaging: From Nano to Macro, 2007. ISBI 2007. 4th IEEE International Symposium on In Biomedical Imaging: From Nano to Macro, 2007. ISBI 2007. 4th IEEE International Symposium on (2007), pp. 65-68. by Meng Wang, Xiaobo Zhou, Fuhai Li, J. Huckins, R. W. King, S. T. C. Wong posted to cell microscopy segmentation by singhsh on 2008-07-21 16:43:34 as
	SEGMENTATION OF TOUCHING CELLS USING GRADIENT FLOW TRACKING [My Copy] Biomedical Imaging: From Nano to Macro, 2007. ISBI 2007. 4th IEEE International Symposium on In Biomedical Imaging: From Nano to Macro, 2007. ISBI 2007. 4th IEEE International Symposium on (2007), pp. 77-80. by Gang Li, Tianming Liu, Jingxin Nie, Lei Guo, S. T. C. Wong posted to cell microscopy segmentation by singhsh on 2008-07-21 16:41:56 as
	Novel cell segmentation and online SVM for cell cycle phase identification in automated microscopy [My Copy] Bioinformatics, Vol. 24, No. 1. (1 January 2008), pp. 94-101. by Meng Wang, Xiaobo Zhou, Fuhai Li, Jeremy Huckins, Randall W. King, Stephen T. Wong posted to cell microscopy segmentation by singhsh on 2008-07-21 16:40:32 as
	Automated segmentation, classification, and tracking of cancer cell nuclei in time-lapse microscopy [My Copy] Biomedical Engineering, IEEE Transactions on In Biomedical Engineering, IEEE Transactions on, Vol. 53, No. 4. (2006), pp. 762-766. by Xiaowei Chen, Xiaobo Zhou, S. T. C. Wong posted to cell microscopy segmentation by singhsh on 2008-07-21 16:37:26 as
	Detection of blob objects in microscopic zebrafish images based on gradient vector diffusion [My Copy] Cytometry Part A, Vol. 71A, No. 10. (2007), pp. 835-845. by Gang Li, Tianming Liu, Jingxin Nie, et al.Lei Guo, Jarema Malicki, Andrew Mara, Scott A. Holley, Weiming Xia, Stephen T. C. Wong posted to cell microscopy segmentation by singhsh on 2008-07-21 16:35:12 as
	Evaluating performance in three-dimensional fluorescence microscopy [My Copy] Journal of Microscopy, Vol. 228, No. 3. (December 2007), pp. 390-405. by John M. Murray, Paul L. Appleton, Jason R. Swedlow, Jennifer C. Waters posted to confocal fluorescence microscopy by singhsh on 2008-05-26 17:56:07 as along with 1 person lechristophe
	Handbook of Biological Confocal Microscopy [My Copy] (04 August 2006) by J. Pawley posted to book confocal fluorescence microscopy by singhsh on 2008-05-22 14:57:20 as along with 3 people and 1 group cherrie amcmorl NicMag Tumor Microenvironment @ OSU
	Computational imaging in cell biology. [My Copy] The Journal of cell biology, Vol. 161, No. 3. (12 May 2003), pp. 477-481. by R. Eils, C. Athale posted to c confocal microscopy by singhsh on 2008-05-21 14:45:58 as along with 1 group Tumor Microenvironment @ OSU
	Multiple immunofluorescence labelling of formalin-fixed paraffin-embedded (FFPE) tissue [My Copy] BMC Cell Biology, Vol. 9 (19 March 2008), 13. by David Robertson, Kay Savage, Jorge S. Reis-Filho, Clare M. Isacke posted to confocal fluorescence microscopy by singhsh on 2008-05-16 20:24:42 as along with 5 people wmatsui Zephyrus Plinio voldog guhjy
	The third dimension bridges the gap between cell culture and live tissue [My Copy] Nature Reviews Molecular Cell Biology, Vol. 8, No. 10., pp. 839-845. by Francesco Pampaloni, Emmanuel G. Reynaud, Ernst H. K. Stelzer posted to confocal microscopy tme by singhsh on 2008-05-12 17:46:33 as along with 1 group Tumor Microenvironment @ OSU
	3D Cell Nuclei Segmentation Based on Gradient Flow Tracking [My Copy] BMC Cell Biology, Vol. 8 (04 September 2007), 40. by Gang Li, Tianming Liu, Ashley Tarokh, et al.Jingxin Nie, Lei Guo, Andrew Mara, Scott Holley, Stephen Wong posted to cell confocal fluorescence microscopy nuclei segmentation tme by singhsh on 2008-04-08 05:09:42 as along with 1 person and 1 group Doug Tumor Microenvironment @ OSU
	Spectral Separation of Multifluorescence Labels with the LSM 510 META [My Copy] posted to fluorescence microscopy multi-spectral tme by singhsh on 2008-03-15 06:32:35 as along with 1 group Tumor Microenvironment @ OSU
	Multispectral imaging fluorescence microscopy for living cells. [My Copy] Cell Struct Funct, Vol. 27, No. 5. (October 2002), pp. 367-374. by Y. Hiraoka, T. Shimi, T. Haraguchi posted to fluorescence microscopy multi-spectral tme by singhsh on 2008-03-15 05:49:48 as along with 1 group Tumor Microenvironment @ OSU
	Spectral Imaging and Linear Unmixing in Light Microscopy [My Copy] Microscopy Techniques (2005), pp. 245-265. by Timo Zimmermann posted to fluorescence microscopy multi-spectral tme unmixing by singhsh on 2008-03-14 22:23:31 as along with 1 group Tumor Microenvironment @ OSU
	Multi-spectral imaging and linear unmixing add a whole new dimension to laser scanning fluorescence microscopy. [My Copy] Biotechniques, Vol. 31, No. 6. (December 2001) by M. E. Dickinson, G. Bearman, S. Tille, R. Lansford, S. E. Fraser posted to fluorescence microscopy multi-spectral tme by singhsh on 2008-03-14 22:19:49 as along with 1 group Tumor Microenvironment @ OSU
	A multi-model approach to simultaneous segmentation and classification of heterogeneous populations of cell nuclei in 3D confocal microscope images [My Copy] Cytometry Part A, Vol. 71A, No. 9. (2007), pp. 724-736. by Gang Lin, Monica K. Chawla, Kathy Olson, et al.Carol A. Barnes, John F. Guzowski, Christopher Bjornsson, William Shain, Badrinath Roysam posted to confocal microscopy by singhsh on 2008-03-14 02:53:07 as
	Optical sectioning microscopy [My Copy] Nature Methods, Vol. 2, No. 12. (18 November 2005), pp. 920-931. by José-Angel Conchello, Jeff W. Lichtman posted to confocal fluorescence microscopy tme by singhsh on 2008-03-01 22:13:47 as along with 1 person and 2 groups mouse TELEPAT-ES Tumor Microenvironment @ OSU

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segmentation	88
microscopy	60
validation	51
evaluation	47
cell	43
book	25
cancer	23
bias-field	19
tme	17
shape	16
fluorescence	15
learning	15
biology	14
classification	14
imaging	14
confocal	12
nucleus	12
image	10
mri	10
bioimage	9
microenvironment	9
tumor	9
morphology	8
clustering	7
review	7
transfer-functions	6
manifold	5
raghu-888	5
textures	5
vision	5
em	4
model	4
multi-spectral	4
regression	4
texture-classification	4
analysis	3
bayesian	3
comparison	3
dimension-reduction	3
kernels	3
level-sets	3
machine-learning	3
nuclear_architecture	3
overview	3
perspective	3
ploidy	3
spherical_harmonics	3
statistics	3
bioinformatics	2
biomarker	2
cluster	2
data-mining	2
deformable_models	2
hypothesis-driven	2
manifolds	2
medical	2
metastasis	2
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optimization	2
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pdm	2
prior	2
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shape_analysis	2
synthesis	2
active-contour	1
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angiogenesis	1
appearance	1
asm	1
based	1
bio	1
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c	1
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collagen	1
computational-geometry	1
correspondence	1
cyclin	1
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ge-cell	1
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molecular	1
mr	1
nature	1
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nonlinear	1
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npcf	1
nuleus	1
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parametrization	1
partition	1
pattern-theory	1
pca	1
probability	1
processes	1
prostate	1
psf	1
quantitative	1
radial-profile	1
random-fields	1
roc	1
sets	1
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shape_representation	1
snakes	1
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svm	1
systems	1
theory	1
tools	1
tracking	1
u01-reference	1
unmixing	1
unsupervised	1
visualization	1
weka	1

singhsh's microscopy [60 articles] Export

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