skembel's metagenomics [40 articles] Export

Recent papers added to skembel's library classified by the tag metagenomics. You can also see everyone's metagenomics.

	Prokaryotic Genomes and Diversity in Surface Ocean Waters: Interrogating the Global Ocean Sampling Metagenome [My Copy] Appl. Environ. Microbiol., Vol. 75, No. 7. (1 April 2009), pp. 2221-2229. by Erin J. Biers, Shulei Sun, Erinn C. Howard posted to otus metagenomics gos by skembel on 2009-11-18 22:17:14 as along with 2 people and 1 group Thaverkamp EKotlarska iSEEM
	The effect of sequencing errors on metagenomic gene prediction [My Copy] BMC Genomics, Vol. 10, No. 1. (12 November 2009), 520. by Katharina Hoff posted to sequencing metagenomics gene_prediction by skembel on 2009-11-18 21:40:20 as along with 3 people and 2 groups ajsferreira jsatkosk ppgardne iSEEM Journal picks
	Metagenomic Analysis of Respiratory Tract DNA Viral Communities in Cystic Fibrosis and Non-Cystic Fibrosis Individuals [My Copy] PLoS ONE, Vol. 4, No. 10. (9 October 2009), e7370. by Dana Willner, Mike Furlan, Matthew Haynes, et al.Robert Schmieder, Florent E. Angly, Joas Silva, Sassan Tammadoni, Bahador Nosrat, Douglas Conrad, Forest Rohwer posted to viral metagenomics cystic_fibrosis cf by skembel on 2009-11-02 22:21:02 as
	ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes [My Copy] Bioinformatics, Vol. 25, No. 20. (15 October 2009), pp. 2737-2738. by Erik Kristiansson, Philip Hugenholtz, Daniel Dalevi posted to software r metagenomics by skembel on 2009-10-09 23:43:36 as along with 4 people and 1 group operon jmeppley dswan djkt iSEEM
	Environmental Genome Shotgun Sequencing of the Sargasso Sea [My Copy] Science, Vol. 304, No. 5667. (2 April 2004), pp. 66-74. by J. Craig Venter, Karin Remington, John F. Heidelberg, et al.Aaron L. Halpern, Doug Rusch, Jonathan A. Eisen, Dongying Wu, Ian Paulsen, Karen E. Nelson, William Nelson, Derrick E. Fouts, Samuel Levy, Anthony H. Knap, Michael W. Lomas, Ken Nealson, Owen White, Jeremy Peterson, Jeff Hoffman, Rachel Parsons, Holly Baden-Tillson, Cynthia Pfannkoch, Yu-Hui Rogers, Hamilton O. Smith posted to shotgun_sequencing metagenomics by skembel on 2009-10-09 20:25:51 as along with 20 people and 2 groups esyoun Thaverkamp jbhiatt kinestetika knaseanka eoghanharr johanviklund bpb jmeppley balajis eweaver AaronDarling bluto jdelcampo azazello beatrizfernandez wenhan pradiptaray mcox vrich microbiology_nijmegen Microbial-Ecology
	The Airborne Metagenome in an Indoor Urban Environment [My Copy] PLoS ONE, Vol. 3, No. 4. (2 April 2008), e1862. by Susannah G. Tringe, Tao Zhang, Xuguo Liu, et al.Yiting Yu, Wah H. Lee, Jennifer Yap, Fei Yao, Sim T. Suan, Seah K. Ing, Matthew Haynes, Forest Rohwer, Chia L. Wei, Patrick Tan, James Bristow, Edward M. Rubin, Yijun Ruan posted to metagenomics air by skembel on 2009-10-09 20:23:26 as along with 3 people and 1 group vmedina09 semrich djkt iSEEM
	Binning sequences using very sparse labels within a metagenome [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (28 April 2008), 215. by Chon K. Chan, Arthur Hsu, Saman Halgamuge, Sen L. Tang posted to metagenomics binning by skembel on 2009-09-29 22:02:40 as along with 14 people and 3 groups ajsferreira esyoun sriesenfeld jmeppley dakelley Thaverkamp idoerg azazello druvus alexl mjetten werwiesel jlgreen djkt Bioinformatics microbiology_nijmegen iSEEM
	Environmental Shotgun Sequencing: Its Potential and Challenges for Studying the Hidden World of Microbes [My Copy] PLoS Biol, Vol. 5, No. 3. (13 March 2007), e82. by Jonathan A. Eisen posted to metagenomics ess by skembel on 2009-09-18 23:15:56 as along with 16 people and 3 groups druvus hwright Thaverkamp AaronDarling anphony precale adgrativol silberbauer jmeppley jdelcampo azazello beatrizfernandez xingxu jlgreen olympos djkt Microbial-Ecology Green Lab iSEEM
	Comparative Metagenomics of Microbial Communities [My Copy] Science, Vol. 308, No. 5721. (22 April 2005), pp. 554-557. by Susannah G. Tringe, Christian von Mering, Arthur Kobayashi, et al.Asaf A. Salamov, Kevin Chen, Hwai W. Chang, Mircea Podar, Jay M. Short, Eric J. Mathur, John C. Detter, Peer Bork, Philip Hugenholtz, Edward M. Rubin posted to metagenomics by skembel on 2009-09-18 23:15:35 as along with 18 people and 5 groups hwright Thaverkamp Scis0000002 idoerg jbhiatt kozo-ni jmeppley AaronDarling azazello wenhan sgoetz bluto vrich sanchezbuelna mcox mjetten jlgreen djkt Microbial-Ecology anammox microbiology_nijmegen Green Lab iSEEM
	An efficient parallel approach for identifying protein families in large-scale metagenomic data sets [My Copy] In SC '08: Proceedings of the 2008 ACM/IEEE conference on Supercomputing (2008), pp. 1-10. by Changjun Wu, Ananth Kalyanaraman posted to clustering metagenomics by skembel on 2009-05-21 17:53:11 as along with 1 person and 1 group Thaverkamp iSEEM
	Metatranscriptomics reveals unique microbial small RNAs in the ocean\|[rsquo]\|s water column [My Copy] Nature, Vol. 459, No. 7244. (14 May 2009), pp. 266-269. by Yanmei Shi, Gene W. Tyson, Edward F. DeLong posted to metagenomics metatranscriptomics ocean rna by skembel on 2009-05-13 20:58:07 as along with 13 people and 4 groups tonamswish kinestetika gdb michaelbarton samgj vaulot Katje absterga jmeppley Thaverkamp pengchy djkt jbhiatt Papers recommended by the Roscoff Plankton Group Microbial-Ecology microbiology_nijmegen iSEEM
	The microbial ocean from genomes to biomes [My Copy] Nature, Vol. 459, No. 7244. (14 May 2009), pp. 200-206. by Edward F. Delong posted to ecology genomics metagenomics ocean by skembel on 2009-05-13 20:54:21 as along with 6 people and 2 groups roys jmeppley stajich Thaverkamp neils djkt Mycology iSEEM
	Quantifying environmental adaptation of metabolic pathways in metagenomics [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 5. (3 February 2009), pp. 1374-1379. by Tara A. Gianoulis, Jeroen Raes, Prianka V. Patel, et al.Robert Bjornson, Jan O. Korbel, Ivica Letunic, Takuji Yamada, Alberto Paccanaro, Lars J. Jensen, Michael Snyder, Peer Bork, Mark B. Gerstein posted to metagenomics by skembel on 2009-05-11 20:16:14 as along with 16 people and 2 groups paccanarolab vvoorr djkt jjray roys sharpton Lizzy_fun jlgreen Thaverkamp dbensasson anphony michaelbarton idoerg trfield larsjuhljensen jmeppley Paccanaro Lab iSEEM
	Accurate phylogenetic classification of variable-length DNA fragments [My Copy] Nature Methods, Vol. 4, No. 1. (10 December 2006), pp. 63-72. by Alice C. Mchardy, Héctor G. Martín, Aristotelis Tsirigos, Philip Hugenholtz, Isidore Rigoutsos posted to metagenomics methods by skembel on 2009-04-28 23:21:58 as along with 10 people and 4 groups esyoun dakelley Thaverkamp idoerg jmeppley bluto azazello wenhan jlgreen djkt Bioinformatics MBLAB Green Lab iSEEM
	The Sorcerer II Global Ocean Sampling Expedition: Expanding the Universe of Protein Families. [My Copy] PLoS Biol, Vol. 5, No. 3. (13 March 2007) by Shibu Yooseph, Granger Sutton, Douglas B B. Rusch, et al.Aaron L L. Halpern, Shannon J J. Williamson, Karin Remington, Jonathan A A. Eisen, Karla B B. Heidelberg, Gerard Manning, Weizhong Li, Lukasz Jaroszewski, Piotr Cieplak, Christopher S S. Miller, Huiying Li, Susan T T. Mashiyama, Marcin P P. Joachimiak, Christopher van Belle, John-Marc M. Chandonia, David A A. Soergel, Yufeng Zhai, Kannan Natarajan, Shaun Lee, Benjamin J J. Raphael, Vineet Bafna, Robert Friedman, Steven E E. Brenner, Adam Godzik, David Eisenberg, Jack E E. Dixon, Susan S S. Taylor, Robert L L. Strausberg, Marvin Frazier, J Craig C. Venter posted to gos metagenomics by skembel on 2009-04-22 18:53:38 as along with 9 people and 4 groups Thaverkamp AaronDarling azazello jmeppley kaspermunch michC mjetten vrich jlgreen Bioinformatics microbiology_nijmegen Green Lab iSEEM
	Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 6. (10 February 2009), pp. 1948-1953. by J. M. Brulc, D. A. Antonopoulos, M. E. Miller, et al.M. K. Wilson, A. C. Yannarell, E. A. Dinsdale, R. E. Edwards, E. D. Frank, J. B. Emerson, P. Wacklin, P. M. Coutinho, B. Henrissat, K. E. Nelson, B. A. White posted to diversity metagenomics microbiome by skembel on 2009-04-20 23:48:40 as along with 2 people and 1 group jlgreen jmeppley iSEEM
	Annotation of metagenome short reads using proxygenes [My Copy] Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i7-13. by Daniel Dalevi, Natalia N. Ivanova, Konstantinos Mavromatis, et al.Sean D. Hooper, Ernest Szeto, Philip Hugenholtz, Nikos C. Kyrpides, Victor M. Markowitz posted to metagenomics methods by skembel on 2009-04-13 22:05:24 as along with 4 people and 1 group Thaverkamp druvus hpaces neils iSEEM
	Probing Metagenomics by Rapid Cluster Analysis of Very Large Datasets [My Copy] PLoS ONE, Vol. 3, No. 10. (10 October 2008), e3375. by Weizhong Li, John C. Wooley, Adam Godzik posted to gos metagenomics by skembel on 2009-04-13 22:01:18 as along with 2 people azazello reyez
	Metagenomic Analyses of Viruses in Stool Samples from Children with Acute Flaccid Paralysis [My Copy] J. Virol., Vol. 83, No. 9. (1 May 2009), pp. 4642-4651. by Joseph G. Victoria, Amit Kapoor, Linlin Li, et al.Olga Blinkova, Beth Slikas, Chunlin Wang, Asif Naeem, Sohail Zaidi, Eric Delwart posted to metagenomics viral by skembel on 2009-04-10 23:44:24 as
	A Bioinformatician's Guide to Metagenomics [My Copy] Microbiol. Mol. Biol. Rev., Vol. 72, No. 4. (1 December 2008), pp. 557-578. by Victor Kunin, Alex Copeland, Alla Lapidus, Konstantinos Mavromatis, Philip Hugenholtz posted to bioinformatics metagenomics by skembel on 2009-04-10 23:37:54 as along with 40 people and 8 groups ajsferreira CorinYeats sconlan jasontsai halinat hwright michaelbarton taylor73 esyoun bluto idoerg hpaces inquil EKotlarska anphony stajich sharpton vrich vaulot adgrativol jakechen balicea dbk GustavoLacerda guhjy hessec fhalbrit Zephyrus anazhu dswan sjcockell Borelli druvus azazello kinestetika jmeppley neils Katje allysonlister skato_toyaku Orengo Group Journal Picks Shared Literature Resource of the Microbial Fitness Group - MPI Bremen iSEEM Papers recommended by the Roscoff Plankton Group Microbial-Ecology Translational Bioinformatics Roswell Cancer Crosstalk microbiology_nijmegen
	Metagenomics: Read Length Matters [My Copy] Appl. Environ. Microbiol., Vol. 74, No. 5. (1 March 2008), pp. 1453-1463. by K. Eric Wommack, Jaysheel Bhavsar, Jacques Ravel posted to metagenomics by skembel on 2009-04-10 23:36:10 as along with 11 people and 4 groups jbhiatt vaulot djkt jmeppley azazello Thaverkamp skato_toyaku rvgomes alexisfjdufresne alexl bluto Papers recommended by the Roscoff Plankton Group iSEEM Microbial-Ecology microbiology_nijmegen
	Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples [My Copy] PLoS Comput Biol, Vol. 5, No. 4. (10 April 2009), e1000352. by James R. White, Niranjan Nagarajan, Mihai Pop posted to metagenomics methods simulation by skembel on 2009-04-10 23:07:29 as along with 12 people and 2 groups jfr CorinYeats dayjm taylor73 Thaverkamp hpaces sriesenfeld APRegier dswan druvus djkt idoerg Orengo Group Journal Picks iSEEM
	Lineages of acidophilic archaea revealed by community genomic analysis. [My Copy] Science, Vol. 314, No. 5807. (22 December 2006), pp. 1933-1935. by B. J. Baker, G. W. Tyson, R. I. Webb, et al.J. Flanagan, P. Hugenholtz, E. E. Allen, J. F. Banfield posted to archaea diversity metagenomics by skembel on 2009-01-27 17:49:38 as along with 3 people sharpton tkandell theseuskf
	Taxonomic distribution of large DNA viruses in the sea [My Copy] Genome Biology, Vol. 9, No. 7. (2008) by Adam Monier, Jean M. Claverie, Hiroyuki Ogata posted to gos metagenomics phylogenetics by skembel on 2009-01-14 17:31:33 as along with 4 people and 1 group idoerg sriesenfeld neils djkt iSEEM
	It's all relative: ranking the diversity of aquatic bacterial communities. [My Copy] Environmental microbiology (14 July 2008) by Allison K K. Shaw, Aaron L L. Halpern, Karen Beeson, Bao Tran, J Craig C. Venter, Jennifer B H B. Martiny posted to diversity metagenomics by skembel on 2009-01-09 01:06:32 as along with 3 people and 1 group idoerg liucun skato_toyaku iSEEM
	Phylogenetic analyses of ribosomal DNA-containing bacterioplankton genome fragments from a 4000m vertical profile in the North Pacific Subtropical Gyre [My Copy] Environmental Microbiology, Vol. 10, No. 9. (September 2008), pp. 2313-2330. by Pham, D. Vinh, Konstantinidis, et al.T. Konstantinos, Palden, Tsultrim, Delong, F. Edward posted to data metagenomics by skembel on 2009-01-07 20:28:28 as along with 1 person and 3 groups vaulot iSEEM Papers recommended by the Roscoff Plankton Group Microbial-Ecology
	MetaSim—A Sequencing Simulator for Genomics and Metagenomics [My Copy] PLoS ONE, Vol. 3, No. 10. (8 October 2008), e3373. by Daniel C. Richter, Felix Ott, Alexander F. Auch, Ramona Schmid, Daniel H. Huson posted to metagenomics methods simulation by skembel on 2008-12-11 22:07:45 as along with 10 people and 2 groups jonilaserson polivares michaelbarton idoerg sriesenfeld guhjy azazello hpaces druvus nuin BergmanLab iSEEM
	Use of simulated data sets to evaluate the fidelity of metagenomic processing methods. [My Copy] Nature methods, Vol. 4, No. 6. (29 June 2007), pp. 495-500. by Konstantinos Mavromatis, Natalia Ivanova, Kerrie Barry, et al.Harris Shapiro, Eugene Goltsman, Alice C. McHardy, Isidore Rigoutsos, Asaf Salamov, Frank Korzeniewski, Miriam Land, Alla Lapidus, Igor Grigoriev, Paul Richardson, Philip Hugenholtz, Nikos C. Kyrpides posted to metagenomics methods by skembel on 2008-12-11 18:57:56 as along with 16 people and 5 groups dakelley taylor73 sriesenfeld Thaverkamp druvus Yanno oamg jmeppley bluto azazello GustavoLacerda carlk alexl mjetten jlgreen djkt Glimcher_Lab Bioinformatics microbiology_nijmegen Green Lab iSEEM
	METAGENOMICS: DNA SEQUENCING OF ENVIRONMENTAL SAMPLES [My Copy] Nat Rev Genet, Vol. 6, No. 11. (November 2005), pp. 805-814. by Susannah G. Tringe, Edward M. Rubin posted to metagenomics tag by skembel on 2008-12-09 23:36:02 as along with 2 people jmeppley niallhaslam
	Quantitative assessment of protein function prediction from metagenomics shotgun sequences [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 35. (28 August 2007), pp. 13913-13918. by E. D. Harrington, A. H. Singh, T. Doerks, et al.I. Letunic, C. von Mering, L. J. Jensen, J. Raes, P. Bork posted to annotation metagenomics methods phylotyping by skembel on 2008-11-30 23:01:22 as along with 3 people and 1 group michC bluto larsjuhljensen iSEEM
	Signature, a web server for taxonomic characterization of sequence samples using signature genes. [My Copy] Nucleic acids research (23 May 2008) by Bas E E. Dutilh, Ying He, Maarten L L. Hekkelman, Martijn A A. Huynen posted to metagenomics methods phylotyping by skembel on 2008-11-30 22:59:47 as along with 1 person and 2 groups mjetten anammox microbiology_nijmegen
	Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 30. (29 July 2008), pp. 10583-10588. by Jennifer F. Biddle, Sorel Fitz-Gibbon, Stephan C. Schuster, Jean E. Brenchley, Christopher H. House posted to metagenomics pyrosequencing by skembel on 2008-11-30 22:58:15 as along with 5 people and 2 groups Thaverkamp michaelbarton jmeppley sriesenfeld skato_toyaku Microbial-Ecology iSEEM
	Community Genomics Among Stratified Microbial Assemblages in the Ocean's Interior [My Copy] Science, Vol. 311, No. 5760. (27 January 2006), pp. 496-503. by Edward F. Delong, Christina M. Preston, Tracy Mincer, et al.Virginia Rich, Steven J. Hallam, Niels-Ulrik Frigaard, Asuncion Martinez, Matthew B. Sullivan, Robert Edwards, Beltran R. Brito, Sallie W. Chisholm, David M. Karl posted to metagenomics microbial by skembel on 2008-11-21 22:13:28 as along with 15 people and 5 groups hwright anphony Thaverkamp eoghanharr dayjm jmeppley michC bluto jdelcampo beatrizfernandez mjetten mcox vrich jlgreen djkt Savage Lab, UCLA Microbial-Ecology microbiology_nijmegen Green Lab iSEEM
	A comparison of random sequence reads versus 16S rDNA sequences for estimating the biodiversity of a metagenomic library [My Copy] Nucl. Acids Res. (5 August 2008), gkn496. by Chaysavanh Manichanh, Charles E. Chapple, Lionel Frangeul, Karine Gloux, Roderic Guigo, Joel Dore posted to diversity metagenomics methods by skembel on 2008-11-19 19:17:16 as along with 3 people and 1 group bluto sconlan druvus iSEEM
	Metagenomics reveals our incomplete knowledge of global diversity. [My Copy] Bioinformatics (Oxford, England) (13 July 2008) by Miguel Pignatelli, Gabriel Aparicio, Ignacio Blanquer, Vicente Hernández, Andrés Moya, Javier Tamames posted to diversity metagenomics by skembel on 2008-11-19 19:16:25 as along with 10 people and 3 groups hwright Thaverkamp jmeppley microrita druvus vaulot reyez djkt bootsy nuin Papers recommended by the Roscoff Plankton Group Microbial-Ecology iSEEM
	Phylogenetic classification of short environmental DNA fragments [My Copy] Nucl. Acids Res., Vol. 36, No. 7. (19 February 2008), pp. gkn038-2239. by Lutz Krause, Naryttza N. Diaz, Alexander Goesmann, et al.Scott Kelley, Tim W. Nattkemper, Forest Rohwer, Robert A. Edwards, Jens Stoye posted to metagenomics methods pyrosequencing by skembel on 2008-11-19 19:15:18 as along with 7 people esyoun ematsen dakelley idoerg sriesenfeld hpaces vrich
	Metagenomic Analysis of the Human Distal Gut Microbiome [My Copy] Science, Vol. 312, No. 5778. (2 June 2006), pp. 1355-1359. by Steven R. Gill, Mihai Pop, Robert T. DeBoy, et al.Paul B. Eckburg, Peter J. Turnbaugh, Buck S. Samuel, Jeffrey I. Gordon, David A. Relman, Claire M. Fraser-Liggett, Karen E. Nelson posted to metagenomics microbiome by skembel on 2008-11-19 19:13:34 as along with 22 people and 9 groups cmzmasek Thaverkamp jbhiatt windman83 Zephyrus vvoorr Yanno ana dayjm jmeppley dchughes cmm neveaire hcmorton michC bluto azazello beatrizfernandez wenhan xingxu host-bacteria melissa_wos structural_bioinformatics Biostatistics Computational-Genomics Bioinformatics Neuroscience FAB-lab G4ID Microbial-Ecology Genetics-of-Gambling
	Metagenomics: genomic analysis of microbial communities. [My Copy] Annu Rev Genet, Vol. 38 (2004), pp. 525-552. by C. S. Riesenfeld, P. D. Schloss, J. Handelsman posted to metagenomics by skembel on 2008-11-15 00:06:19 as along with 7 people and 2 groups Thaverkamp ericvonwettberg knaseanka jmeppley wenhan mcox djkt Green Lab iSEEM
	Using pyrosequencing to shed light on deep mine microbial ecology. [My Copy] BMC Genomics, Vol. 7 (2006) by R. A. Edwards, B. Rodriguez-Brito, L. Wegley, et al.M. Haynes, M. Breitbart, D. M. Peterson, M. O. Saar, S. Alexander, E. C. Alexander, F. Rohwer posted to metagenomics pyrosequencing by skembel on 2008-11-10 01:32:03 as along with 8 people and 1 group Thaverkamp jmeppley balicea rabu xingxu mcox darioacha werwiesel iSEEM
	The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific [My Copy] PLoS Biol, Vol. 5, No. 3. (13 March 2007), e77. by Douglas B. Rusch, Aaron L. Halpern, Granger Sutton, et al.Karla B. Heidelberg, Shannon Williamson, Shibu Yooseph, Dongying Wu, Jonathan A. Eisen, Jeff M. Hoffman, Karin Remington, Karen Beeson, Bao Tran, Hamilton Smith, Holly Baden-Tillson, Clare Stewart, Joyce Thorpe, Jason Freeman, Cynthia Andrews-Pfannkoch, Joseph E. Venter, Kelvin Li, Saul Kravitz, John F. Heidelberg, Terry Utterback, Yu-Hui Rogers, Luisa I. Falcón, Valeria Souza, Germán Bonilla-Rosso, Luis E. Eguiarte, David M. Karl, Shubha Sathyendranath, Trevor Platt, Eldredge Bermingham, Victor Gallardo, Giselle Tamayo-Castillo, Michael R. Ferrari, Robert L. Strausberg, Kenneth Nealson, Robert Friedman, Marvin Frazier, J. Craig Venter posted to metagenomics microbial by skembel on 2008-11-10 01:16:37 as along with 17 people and 5 groups antonkratz dakelley maria_hauser mlangill AaronDarling azazello aramata jmeppley kaspermunch michC jdelcampo stajich skoch3 beatrizfernandez kinestetika Thaverkamp djkt Bioinformatics Microbial-Ecology Koch_Lab microbiology_nijmegen iSEEM

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diversity	46
phylogenetics	42
metagenomics	40
microbial	32
methods	28
phylodiversity	20
communityecology	15
genomics	14
microbiome	13
pyrosequencing	12
comparativemethods	10
microbes	8
454	7
neutral	7
16s	6
alignment	6
betadiversity	6
diversification	6
entropy	6
roots	6
selection	6
software	6
functionaldiversity	5
ocean	5
phylogenomics	5
phylotyping	5
ecology	4
gos	4
phylogeny	4
supermatrix	4
supertrees	4
traits	4
viral	4
adaptation	3
bacteria	3
bayesian	3
biogeography	3
foraging	3
fungi	3
leaves	3
niche	3
r	3
roc	3
abundance	2
air	2
ants	2
cf	2
coalescent	2
community	2
competition	2
endophytes	2
evolution	2
genetics	2
genomes	2
gut	2
ml	2
nextgensequencing	2
otu	2
profiling	2
simulation	2
species	2
angiosperms	1
annotation	1
archaea	1
bacterial	1
barcode	1
bats	1
bci	1
belowground	1
binning	1
bioinformatics	1
bootstrap	1
climatechange	1
clustering	1
coevolution	1
cogs	1
community_ecology	1
community_structure	1
copy_number	1
cystic_fibrosis	1
data	1
depth	1
diatoms	1
dispersal	1
drift	1
ess	1
ffp	1
functional_characterization	1
funding	1
gene_prediction	1
grants	1
greedyalgorithm	1
hpc	1
incongruence	1
kmer	1
ltt	1
marine	1
mcmc	1
megatree	1
metabolic	1
metacommunity	1
metatranscriptomics	1
missingdata	1
mp	1
mutualisms	1
nserc	1
operon	1
orthologs	1
otus	1
outofafrica	1
partitioning	1
pd	1
ph	1
phenology	1
phyllosphere	1
phylochip	1
plants	1
popgen	1
profiles	1
proteomics	1
pseudomonas	1
rarity	1
rna	1
sampling	1
sanger	1
schizophrenia	1
sequencing	1
shannon	1
shewanella	1
shotgun_sequencing	1
spatial	1
speciation	1
symbioses	1
systems_biology	1
tag	1
teaching	1
transcriptome	1
treeoflife	1
underground	1
wow	1

skembel's metagenomics [40 articles] Export

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