skembel's microbial [32 articles] Export

Recent papers added to skembel's library classified by the tag microbial. You can also see everyone's microbial.

	Global patterns of diversity and community structure in marine bacterioplankton [My Copy] Molecular Ecology, Vol. 16, No. 4. (February 2007), pp. 867-880. by T. Pommier, B. Canbäck, L. Riemann, et al.K. H. Boström, K. Simu, P. Lundberg, A. Tunlid, Hagström posted to microbial marine diversity communityecology by skembel on 2009-09-03 00:11:28 as along with 3 people and 1 group hwright jdelcampo beatrizfernandez Microbial-Ecology
	Microbial community structure in the North Pacific ocean [My Copy] The ISME Journal (23 July 2009) by Mark V. Brown, Gayle K. Philip, John A. Bunge, et al.Matthew C. Smith, Andrew Bissett, Federico M. Lauro, Jed A. Fuhrman, Stuart P. Donachie posted to pyrosequencing microbial depth communityecology by skembel on 2009-09-03 00:04:05 as along with 1 person skato_toyaku
	Seasonality and vertical structure of microbial communities in an ocean gyre [My Copy] The ISME Journal, Vol. 3, No. 10. (04 June 2009), pp. 1148-1163. by Alexander H. Treusch, Kevin L. Vergin, Liam A. Finlay, et al.Michael G. Donatz, Robert M. Burton, Craig A. Carlson, Stephen J. Giovannoni posted to ocean microbial communityecology bats by skembel on 2009-08-20 23:22:31 as along with 1 person kinestetika
	In Situ Phylogenetic Structure and Diversity of Wild Bradyrhizobium Communities [My Copy] Appl. Environ. Microbiol., Vol. 75, No. 14. (15 July 2009), pp. 4727-4735. by J. L. Sachs, S. W. Kembel, A. H. Lau, E. L. Simms posted to microbial phylodiversity roots symbioses by skembel on 2009-07-10 19:54:59 as along with 1 person and 1 group iedwards phylocom
	Microbial community profiling for human microbiome projects: Tools, techniques, and challenges [My Copy] Genome Research, Vol. 19, No. 7. (21 July 2009), pp. 1141-1152. by Micah Hamady, Rob Knight posted to microbial microbiome profiling by skembel on 2009-07-04 21:34:48 as along with 6 people and 2 groups jbhiatt dakelley sharpton djkt ppgardne neils iSEEM Journal picks
	Microbial diversity - insights from population genetics [My Copy] Environmental Microbiology, Vol. 0, No. 0. (0000), pp. ???-???. by Ted H. Mes posted to diversity microbial popgen by skembel on 2009-05-01 18:18:17 as along with 7 people and 3 groups adgrativol jonathaneisen jmeppley kinestetika Katje Thaverkamp Olaf_Ilzins iSEEM Microbial-Ecology microbiology_nijmegen
	Estimating prokaryotic diversity and its limits. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 16. (6 August 2002), pp. 10494-10499. by T. P. Curtis, W. T. Sloan, J. W. Scannell posted to diversity microbial by skembel on 2009-03-10 23:43:02 as along with 4 people florisbuijzen fornstar liucun mcox
	A new phylum of Archaea represented by a nanosized hyperthermophilic symbiont [My Copy] Nature, Vol. 417, No. 6884. (2 May 2002), pp. 63-67. by Harald Huber, Michael J. Hohn, Reinhard Rachel, Tanja Fuchs, Verena C. Wimmer, Karl O. Stetter posted to 16s diversity microbial by skembel on 2009-03-10 23:42:41 as
	Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre [My Copy] Environmental Microbiology, Vol. 11, No. 6. (2009), pp. 1358-1375. by Rachel S. Poretsky, Ian Hewson, Shulei Sun, Andrew E. Allen, Jonathan P. Zehr, Mary A. Moran posted to microbial transcriptome by skembel on 2009-03-04 00:41:27 as along with 3 people and 1 group kinestetika jmeppley djkt iSEEM
	The Bacterial Species Challenge: Making Sense of Genetic and Ecological Diversity [My Copy] Science, Vol. 323, No. 5915. (6 February 2009), pp. 741-746. by Christophe Fraser, Eric J. Alm, Martin F. Polz, Brian G. Spratt, William P. Hanage posted to microbial species by skembel on 2009-02-09 23:31:20 as along with 16 people and 1 group marinard pkm kinestetika katholt jlgreen Katje dbikard anphony provero pkapoorvijay druvus kshundyak balabu ellakat jjray yonatanf iSEEM
	Quantifying the roles of immigration and chance in shaping prokaryote community structure [My Copy] Environmental Microbiology, Vol. 8, No. 4. (April 2006), pp. 732-740. by William T. Sloan, Mary Lunn, Stephen Woodcock, Ian M. Head, Sean Nee, Thomas P. Curtis posted to communityecology microbial neutral by skembel on 2008-12-05 21:50:00 as
	The genomic code: inferring Vibrionaceae niche specialization [My Copy] Nature Reviews Microbiology, Vol. 4, No. 9. (07 August 2006), pp. 697-704. by Jerry F. Reen, Salvador Almagro-Moreno, David Ussery, Fidelma E. Boyd posted to adaptation genomics microbial niche by skembel on 2008-11-30 23:07:31 as along with 1 person jmeppley
	Resource Partitioning and Sympatric Differentiation Among Closely Related Bacterioplankton [My Copy] Science, Vol. 320, No. 5879. (23 May 2008), pp. 1081-1085. by Dana E. Hunt, Lawrence A. David, Dirk Gevers, Sarah P. Preheim, Eric J. Alm, Martin F. Polz posted to communityecology microbial by skembel on 2008-11-30 23:00:29 as along with 3 people and 2 groups karinlag yonatanf jlgreen Green Lab iSEEM
	Novelty and Uniqueness Patterns of Rare Members of the Soil Biosphere [My Copy] Appl. Environ. Microbiol., Vol. 74, No. 17. (1 September 2008), pp. 5422-5428. by Mostafa S. Elshahed, Noha H. Youssef, Anne M. Spain, et al.Cody Sheik, Fares Z. Najar, Leonid O. Sukharnikov, Bruce A. Roe, James P. Davis, Patrick D. Schloss, Vanessa L. Bailey, Lee R. Krumholz posted to diversity microbial rarity by skembel on 2008-11-24 18:43:31 as
	Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing [My Copy] PLoS Genet, Vol. 4, No. 11. (21 November 2008), e1000255. by Susan M. Huse, Les Dethlefsen, Julie A. Huber, David M. Welch, David A. Relman, Mitchell L. Sogin posted to diversity microbial by skembel on 2008-11-23 21:20:41 as along with 4 people and 2 groups Huub_odc azazello sconlan djkt microbiology_nijmegen iSEEM
	Community Genomics Among Stratified Microbial Assemblages in the Ocean's Interior [My Copy] Science, Vol. 311, No. 5760. (27 January 2006), pp. 496-503. by Edward F. Delong, Christina M. Preston, Tracy Mincer, et al.Virginia Rich, Steven J. Hallam, Niels-Ulrik Frigaard, Asuncion Martinez, Matthew B. Sullivan, Robert Edwards, Beltran R. Brito, Sallie W. Chisholm, David M. Karl posted to metagenomics microbial by skembel on 2008-11-21 22:13:28 as along with 15 people and 5 groups hwright anphony Thaverkamp eoghanharr dayjm jmeppley michC bluto jdelcampo beatrizfernandez mjetten mcox vrich jlgreen djkt Savage Lab, UCLA Microbial-Ecology microbiology_nijmegen Green Lab iSEEM
	Microbial community gene expression in ocean surface waters [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 10. (11 March 2008), pp. 3805-3810. by Jorge Frias-Lopez, Yanmei Shi, Gene W. Tyson, et al.Maureen L. Coleman, Stephan C. Schuster, Sallie W. Chisholm, Edward F. DeLong posted to communityecology microbial by skembel on 2008-11-21 21:44:15 as along with 10 people and 3 groups hwright druvus elbrodie idoerg bluto mcox tmmurali vaulot mjetten jlgreen microbiology_nijmegen Green Lab iSEEM
	Functional metagenomic profiling of nine biomes [My Copy] Nature, Vol. 452, No. 7187. (12 March 2008), pp. 629-632. by Elizabeth A. Dinsdale, Robert A. Edwards, Dana Hall, et al.Florent Angly, Mya Breitbart, Jennifer M. Brulc, Mike Furlan, Christelle Desnues, Matthew Haynes, Linlin Li, Lauren McDaniel, Mary A. Moran, Karen E. Nelson, Christina Nilsson, Robert Olson, John Paul, Beltran R. Brito, Yijun Ruan, Brandon K. Swan, Rick Stevens, David L. Valentine, Rebecca V. Thurber, Linda Wegley, Bryan A. White, Forest Rohwer posted to diversity microbial viral by skembel on 2008-11-17 23:15:58 as along with 17 people and 6 groups idoerg Thaverkamp shuzhens anphony michaelbarton azazello guhjy djkt neils kinestetika bluto oelemento alexisfjdufresne vaulot jmeppley vrich jlgreen Savage Lab, UCLA microbiology_nijmegen Microbial-Ecology Papers recommended by the Roscoff Plankton Group Green Lab iSEEM
	Environmental Genomics Reveals a Single-Species Ecosystem Deep Within Earth [My Copy] Science, Vol. 322, No. 5899. (10 October 2008), pp. 275-278. by Dylan Chivian, Eoin L. Brodie, Eric J. Alm, et al.David E. Culley, Paramvir S. Dehal, Todd Z. DeSantis, Thomas M. Gihring, Alla Lapidus, Li-Hung Lin, Stephen R. Lowry, Duane P. Moser, Paul M. Richardson, Gordon Southam, Greg Wanger, Lisa M. Pratt, Gary L. Andersen, Terry C. Hazen, Fred J. Brockman, Adam P. Arkin, Tullis C. Onstott posted to 16s 454 diversity microbial sanger by skembel on 2008-11-15 01:01:56 as along with 9 people and 4 groups yyfwuhan lflorez claymans vaulot djkt Katje dinnes neils kinestetika Papers recommended by the Roscoff Plankton Group Microbial-Ecology iSEEM microbiology_nijmegen
	Diversity and seasonal dynamics of bacterial community in indoor environment [My Copy] BMC Microbiology, Vol. 8, No. 1. (2008) by Helena Rintala, Miia Pitkaranta, Mika Toivola, Lars Paulin, Aino Nevalainen posted to communityecology diversity microbial by skembel on 2008-11-14 22:38:13 as along with 1 person wanyusong
	A statistical toolbox for metagenomics: assessing functional diversity in microbial communities [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (23 January 2008), 34. by Patrick Schloss, Jo Handelsman posted to communityecology methods microbial by skembel on 2008-11-14 22:37:44 as along with 13 people and 4 groups ajsferreira hwright orzenil taylor73 idoerg jonathaneisen druvus jmeppley Thaverkamp alexisfjdufresne mjetten bluto djkt Microbial-Ecology anammox microbiology_nijmegen iSEEM
	The rate and pattern of cladogenesis in microbes. [My Copy] Evolution; international journal of organic evolution, Vol. 58, No. 5. (May 2004), pp. 946-955. by A. P. Martin, E. K. Costello, A. F. Meyer, D. R. Nemergut, S. K. Schmidt posted to comparativemethods microbial by skembel on 2008-11-14 00:05:10 as along with 1 group iSEEM
	The diversity and biogeography of soil bacterial communities. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 3. (17 January 2006), pp. 626-631. by N. Fierer, R. B. Jackson posted to diversity microbial by skembel on 2008-11-13 23:44:38 as along with 3 people and 1 group idoerg fornstar djkt iSEEM
	The last word: books as a statistical metaphor for microbial communities. [My Copy] Annual review of microbiology, Vol. 61 (2007), pp. 23-34. by P. D. Schloss, J. Handelsman posted to diversity microbial by skembel on 2008-11-13 23:35:46 as along with 1 person and 1 group madhadron iSEEM
	Evaluating different approaches that test whether microbial communities have the same structure [My Copy] ISME J, Vol. 2, No. 3. (31 January 2008), pp. 265-275. by Patrick D. Schloss posted to communityecology microbial by skembel on 2008-11-13 23:33:48 as along with 5 people and 2 groups hexaquo taylor73 jonathaneisen djkt sconlan Waikato - Erebus iSEEM
	Rules of Engagement: Interspecies Interactions that Regulate Microbial Communities [My Copy] Annual Review of Microbiology, Vol. 62, No. 1. (2008), pp. 375-401. by Ainslie E. F. Little, Courtney J. Robinson, Brook S. Peterson, Kenneth F. Raffa, Jo Handelsman posted to communityecology microbial by skembel on 2008-11-13 19:14:48 as along with 1 person and 1 group jladau iSEEM
	The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific [My Copy] PLoS Biol, Vol. 5, No. 3. (13 March 2007), e77. by Douglas B. Rusch, Aaron L. Halpern, Granger Sutton, et al.Karla B. Heidelberg, Shannon Williamson, Shibu Yooseph, Dongying Wu, Jonathan A. Eisen, Jeff M. Hoffman, Karin Remington, Karen Beeson, Bao Tran, Hamilton Smith, Holly Baden-Tillson, Clare Stewart, Joyce Thorpe, Jason Freeman, Cynthia Andrews-Pfannkoch, Joseph E. Venter, Kelvin Li, Saul Kravitz, John F. Heidelberg, Terry Utterback, Yu-Hui Rogers, Luisa I. Falcón, Valeria Souza, Germán Bonilla-Rosso, Luis E. Eguiarte, David M. Karl, Shubha Sathyendranath, Trevor Platt, Eldredge Bermingham, Victor Gallardo, Giselle Tamayo-Castillo, Michael R. Ferrari, Robert L. Strausberg, Kenneth Nealson, Robert Friedman, Marvin Frazier, J. Craig Venter posted to metagenomics microbial by skembel on 2008-11-10 01:16:37 as along with 17 people and 5 groups antonkratz dakelley maria_hauser mlangill AaronDarling azazello aramata jmeppley kaspermunch michC jdelcampo stajich skoch3 beatrizfernandez kinestetika Thaverkamp djkt Bioinformatics Microbial-Ecology Koch_Lab microbiology_nijmegen iSEEM
	Quantitative phylogenetic assessment of microbial communities in diverse environments. [My Copy] Science (New York, N.Y.), Vol. 315, No. 5815. (23 February 2007), pp. 1126-1130. by C. von Mering, P. Hugenholtz, J. Raes, et al.S. G. Tringe, T. Doerks, L. J. Jensen, N. Ward, P. Bork posted to microbial phylodiversity phylogenetics by skembel on 2008-11-07 19:20:01 as along with 19 people and 7 groups hwright pkm michaelbarton idoerg sriesenfeld kozo-ni ana nickluscombe michC bluto agg19954 TaqSys azazello Thaverkamp larsjuhljensen rvgomes mjetten jlgreen djkt structural_bioinformatics Bioinformatics EBI-regulation Microbial-Ecology microbiology_nijmegen Green Lab iSEEM
	Short pyrosequencing reads suffice for accurate microbial community analysis [My Copy] Nucl. Acids Res., Vol. 35, No. 18. (25 September 2007), e120. by Zongzhi Liu, Catherine Lozupone, Micah Hamady, Frederic D. Bushman, Rob Knight posted to diversity methods microbial by skembel on 2008-11-07 00:17:26 as along with 4 people and 2 groups niallhaslam vrich jlgreen djkt Green Lab iSEEM
	From the Cover: A latitudinal diversity gradient in planktonic marine bacteria [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 22. (3 June 2008), pp. 7774-7778. by Jed A. Fuhrman, Joshua A. Steele, Ian Hewson, et al.Michael S. Schwalbach, Mark V. Brown, Jessica L. Green, James H. Brown posted to diversity microbial by skembel on 2008-11-07 00:16:28 as along with 6 people and 4 groups hwright paulm skato_toyaku jlgreen vaulot djkt Green Lab iSEEM Microbial-Ecology Papers recommended by the Roscoff Plankton Group
	Global patterns in bacterial diversity [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 27. (3 July 2007), pp. 11436-11440. by Catherine A. Lozupone, Rob Knight posted to diversity microbial by skembel on 2008-11-07 00:07:06 as along with 1 person and 1 group jonathaneisen iSEEM
	High beta diversity of bacteria in the shallow terrestrial subsurface [My Copy] Environmental Microbiology, Vol. 10, No. 10. (October 2008), pp. 2537-2549. by Wang, Jianjun, Wu, et al. Yucheng, Jiang, Hongchen, Li, Chunhai, Dong, Hailiang, Wu, Qinglong, Soininen, Janne, Shen, Ji posted to betadiversity microbial by skembel on 2008-11-06 23:52:51 as

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diversity	46
phylogenetics	42
metagenomics	40
microbial	32
methods	28
phylodiversity	20
communityecology	15
genomics	14
microbiome	13
pyrosequencing	12
comparativemethods	10
microbes	8
454	7
neutral	7
16s	6
alignment	6
betadiversity	6
diversification	6
entropy	6
roots	6
selection	6
software	6
functionaldiversity	5
ocean	5
phylogenomics	5
phylotyping	5
ecology	4
gos	4
phylogeny	4
supermatrix	4
supertrees	4
traits	4
viral	4
adaptation	3
bacteria	3
bayesian	3
biogeography	3
foraging	3
fungi	3
leaves	3
niche	3
r	3
roc	3
abundance	2
air	2
ants	2
cf	2
coalescent	2
community	2
competition	2
endophytes	2
evolution	2
genetics	2
genomes	2
gut	2
ml	2
nextgensequencing	2
otu	2
profiling	2
simulation	2
species	2
angiosperms	1
annotation	1
archaea	1
bacterial	1
barcode	1
bats	1
bci	1
belowground	1
binning	1
bioinformatics	1
bootstrap	1
climatechange	1
clustering	1
coevolution	1
cogs	1
community_ecology	1
community_structure	1
copy_number	1
cystic_fibrosis	1
data	1
depth	1
diatoms	1
dispersal	1
drift	1
ess	1
ffp	1
functional_characterization	1
funding	1
gene_prediction	1
grants	1
greedyalgorithm	1
hpc	1
incongruence	1
kmer	1
ltt	1
marine	1
mcmc	1
megatree	1
metabolic	1
metacommunity	1
metatranscriptomics	1
missingdata	1
mp	1
mutualisms	1
nserc	1
operon	1
orthologs	1
otus	1
outofafrica	1
partitioning	1
pd	1
ph	1
phenology	1
phyllosphere	1
phylochip	1
plants	1
popgen	1
profiles	1
proteomics	1
pseudomonas	1
rarity	1
rna	1
sampling	1
sanger	1
schizophrenia	1
sequencing	1
shannon	1
shewanella	1
shotgun_sequencing	1
spatial	1
speciation	1
symbioses	1
systems_biology	1
tag	1
teaching	1
transcriptome	1
treeoflife	1
underground	1
wow	1

skembel's microbial [32 articles] Export

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