skembel's microbiome [13 articles] Export

Recent papers added to skembel's library classified by the tag microbiome. You can also see everyone's microbiome.

	Functional Characterization of the Antibiotic Resistance Reservoir in the Human Microflora [My Copy] Science, Vol. 325, No. 5944. (28 August 2009), pp. 1128-1131. by Morten O. A. Sommer, Gautam Dantas, George M. Church posted to microbiome gut functional_characterization by skembel on 2009-11-18 22:41:02 as along with 5 people and 1 group jgill pkm chriswillmott rpatward djkt iSEEM
	Human gut microbiome adopts an alternative state following small bowel transplantation [My Copy] Proceedings of the National Academy of Sciences (17 September 2009) by Amber L. Hartman, Denver M. Lough, Dinesh K. Barupal, et al.Oliver Fiehn, Thomas Fishbein, Michael Zasloff, Jonathan A. Eisen posted to microbiome microbes gut by skembel on 2009-09-18 01:08:06 as along with 2 people and 1 group jgill djkt iSEEM
	Microbial community profiling for human microbiome projects: Tools, techniques, and challenges [My Copy] Genome Research, Vol. 19, No. 7. (21 July 2009), pp. 1141-1152. by Micah Hamady, Rob Knight posted to microbial microbiome profiling by skembel on 2009-07-04 21:34:48 as along with 6 people and 2 groups jbhiatt dakelley sharpton djkt ppgardne neils iSEEM Journal picks
	The Macaque Gut Microbiome in Health, Lentiviral Infection, and Chronic Enterocolitis [My Copy] PLoS Pathog, Vol. 4, No. 2. (1 February 2008), e20. by Philip McKenna, Christian Hoffmann, Nana Minkah, et al.Pyone P. Aye, Andrew Lackner, Zongzhi Liu, Catherine A. Lozupone, Micah Hamady, Rob Knight, Frederic D. Bushman posted to 16s microbiome pyrosequencing by skembel on 2009-06-26 20:48:48 as along with 2 people druvus wenhan
	Topographical and Temporal Diversity of the Human Skin Microbiome [My Copy] Science, Vol. 324, No. 5931. (29 May 2009), pp. 1190-1192. by Elizabeth A. Grice, Heidi H. Kong, Sean Conlan, et al.Clayton B. Deming, Joie Davis, Alice C. Young, Nisc Comparative Sequencing Program, Gerard G. Bouffard, Robert W. Blakesley, Patrick R. Murray, Eric D. Green, Maria L. Turner, Julia A. Segre posted to microbiome by skembel on 2009-06-18 01:08:38 as along with 7 people and 1 group roys absterga mishibas ematsen t08681mn sconlan djkt iSEEM
	Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 6. (10 February 2009), pp. 1948-1953. by J. M. Brulc, D. A. Antonopoulos, M. E. Miller, et al.M. K. Wilson, A. C. Yannarell, E. A. Dinsdale, R. E. Edwards, E. D. Frank, J. B. Emerson, P. Wacklin, P. M. Coutinho, B. Henrissat, K. E. Nelson, B. A. White posted to diversity metagenomics microbiome by skembel on 2009-04-20 23:48:40 as along with 2 people and 1 group jlgreen jmeppley iSEEM
	Comparative Metagenomics Revealed Commonly Enriched Gene Sets in Human Gut Microbiomes [My Copy] DNA Res, Vol. 14, No. 4. (1 January 2007), pp. 169-181. by Ken Kurokawa, Takehiko Itoh, Tomomi Kuwahara, et al.Kenshiro Oshima, Hidehiro Toh, Atsushi Toyoda, Hideto Takami, Hidetoshi Morita, Vineet K. Sharma, Tulika P. Srivastava, Todd D. Taylor, Hideki Noguchi, Hiroshi Mori, Yoshitoshi Ogura, Dusko S. Ehrlich, Kikuji Itoh, Toshihisa Takagi, Yoshiyuki Sakaki, Tetsuya Hayashi, Masahira Hattori posted to cogs microbiome by skembel on 2009-04-10 23:11:29 as along with 9 people cmzmasek esyoun jmeppley wenhan carpi melissa_wos vrich bluto FmuO
	Global diversity in the human salivary microbiome [My Copy] Genome Research (April 2009) by Ivan Nasidze, Jing Li, Dominique Quinque, Kun Tang, Mark Stoneking posted to microbiome by skembel on 2009-04-02 20:07:13 as along with 2 people and 1 group djkt jbhiatt iSEEM
	High-throughput diversity and functionality analysis of the gastrointestinal tract microbiota [My Copy] Gut, Vol. 57, No. 11. (1 November 2008), pp. 1605-1615. by E. G. Zoetendal, M. Rajilic-Stojanovic, W. M. de Vos posted to microbiome by skembel on 2008-11-24 23:37:05 as along with 3 people Zephyrus bluto guhjy
	The Pervasive Effects of an Antibiotic on the Human Gut Microbiota, as Revealed by Deep 16S rRNA Sequencing [My Copy] PLoS Biol, Vol. 6, No. 11. (18 November 2008), e280. by Les Dethlefsen, Sue Huse, Mitchell L. Sogin, David A. Relman posted to 454 diversity microbiome pyrosequencing by skembel on 2008-11-24 00:02:07 as along with 7 people and 2 groups hexaquo azazello sconlan jmeppley treangen maggiecontreras djkt Waikato - Erebus iSEEM
	Metagenomic Analysis of the Human Distal Gut Microbiome [My Copy] Science, Vol. 312, No. 5778. (2 June 2006), pp. 1355-1359. by Steven R. Gill, Mihai Pop, Robert T. DeBoy, et al.Paul B. Eckburg, Peter J. Turnbaugh, Buck S. Samuel, Jeffrey I. Gordon, David A. Relman, Claire M. Fraser-Liggett, Karen E. Nelson posted to metagenomics microbiome by skembel on 2008-11-19 19:13:34 as along with 22 people and 9 groups cmzmasek Thaverkamp jbhiatt windman83 Zephyrus vvoorr Yanno ana dayjm jmeppley dchughes cmm neveaire hcmorton michC bluto azazello beatrizfernandez wenhan xingxu host-bacteria melissa_wos structural_bioinformatics Biostatistics Computational-Genomics Bioinformatics Neuroscience FAB-lab G4ID Microbial-Ecology Genetics-of-Gambling
	Evolution of Mammals and Their Gut Microbes [My Copy] Science, Vol. 320, No. 5883. (20 June 2008), pp. 1647-1651. by Ruth E. Ley, Micah Hamady, Catherine Lozupone, et al.Peter J. Turnbaugh, Rob R. Ramey, Stephen J. Bircher, Michael L. Schlegel, Tammy A. Tucker, Mark D. Schrenzel, Rob Knight, Jeffrey I. Gordon posted to coevolution microbiome phylodiversity by skembel on 2008-11-13 23:39:02 as along with 11 people and 2 groups sameersoi pavitra treangen krausedo Zephyrus dinnes djkt dchughes lp2 jlgreen qwermish Green Lab iSEEM
	The convergence of carbohydrate active gene repertoires in human gut microbes [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 39. (30 September 2008), pp. 15076-15081. by Catherine A. Lozupone, Micah Hamady, Brandi L. Cantarel, et al.Pedro M. Coutinho, Bernard Henrissat, Jeffrey I. Gordon, Rob Knight posted to microbiome phylodiversity by skembel on 2008-11-07 00:01:43 as along with 5 people and 1 group cmzmasek sharpton Thaverkamp djkt sg45653 iSEEM

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diversity	46
phylogenetics	42
metagenomics	40
microbial	32
methods	28
phylodiversity	20
communityecology	15
genomics	14
microbiome	13
pyrosequencing	12
comparativemethods	10
microbes	8
454	7
neutral	7
selection	6
entropy	6
software	6
alignment	6
roots	6
betadiversity	6
diversification	6
16s	6
phylogenomics	5
phylotyping	5
ocean	5
functionaldiversity	5
supermatrix	4
phylogeny	4
viral	4
ecology	4
traits	4
gos	4
supertrees	4
fungi	3
leaves	3
adaptation	3
r	3
foraging	3
roc	3
niche	3
bacteria	3
biogeography	3
bayesian	3
genomes	2
simulation	2
abundance	2
cf	2
coalescent	2
competition	2
air	2
ants	2
endophytes	2
nextgensequencing	2
otu	2
community	2
species	2
profiling	2
genetics	2
gut	2
ml	2
evolution	2
megatree	1
shannon	1
shewanella	1
mutualisms	1
diatoms	1
bci	1
sampling	1
proteomics	1
phyllosphere	1
rarity	1
profiles	1
functional_characterization	1
clustering	1
depth	1
annotation	1
schizophrenia	1
metatranscriptomics	1
popgen	1
funding	1
bats	1
belowground	1
data	1
climatechange	1
barcode	1
angiosperms	1
archaea	1
pd	1
bacterial	1
mp	1
metacommunity	1
rna	1
ph	1
wow	1
partitioning	1
incongruence	1
metabolic	1
ltt	1
symbioses	1
sequencing	1
copy_number	1
mcmc	1
coevolution	1
transcriptome	1
greedyalgorithm	1
orthologs	1
outofafrica	1
ess	1
cystic_fibrosis	1
grants	1
pseudomonas	1
operon	1
community_structure	1
spatial	1
bootstrap	1
missingdata	1
marine	1
dispersal	1
community_ecology	1
drift	1
speciation	1
systems_biology	1
nserc	1
phenology	1
plants	1
shotgun_sequencing	1
otus	1
underground	1
gene_prediction	1
tag	1
sanger	1
hpc	1
cogs	1
treeoflife	1
binning	1
phylochip	1
bioinformatics	1
ffp	1
teaching	1
kmer	1

skembel's microbiome [13 articles] Export

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